EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000016482 (Gene tree)
Gene ID: 101422496
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 24979 bases
Position: chrJH570034.1:138716-163694
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000012781	RNA_pol_Rpb1_5	PF04998.17	5.5e-101	1	1
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	1	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	2	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	3	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	4	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	5	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	6	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	7	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	8	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	9	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	10	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	11	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	12	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	13	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	14	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	15	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	16	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	17	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	18	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	19	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	20	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	21	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	22	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	23	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	24	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	25	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	26	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	27	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	28	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	29	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	30	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	31	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	32	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	33	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	34	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	35	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	36	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	37	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	38	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	39	40
ENSDNOP00000012781	RNA_pol_Rpb1_R	PF05001.13	2.3e-27	40	40
ENSDNOP00000012781	RNA_pol_Rpb1_4	PF05000.17	3.9e-38	1	1
ENSDNOP00000012781	RNA_pol_Rpb1_2	PF00623.20	1.3e-74	1	1
ENSDNOP00000012781	RNA_pol_Rpb1_3	PF04983.18	9.1e-50	1	1
ENSDNOP00000012781	RNA_pol_Rpb1_1	PF04997.12	6.8e-109	1	1
ENSDNOP00000012781	RNA_pol_Rpb1_7	PF04990.12	2.2e-54	1	1
ENSDNOP00000012781	RNA_pol_Rpb1_6	PF04992.14	5.9e-31	1	2
ENSDNOP00000012781	RNA_pol_Rpb1_6	PF04992.14	5.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000016485	-	6268	-	ENSDNOP00000012781	1946 (aa)	-	UPI0003CC11A4

Gene Model

Click here to download ENSDNOG00000016482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000016482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000016482	-	67	38.300	ENSDNOG00000010194	POLR3A	91	38.158
ENSDNOG00000016482	-	53	41.935	ENSDNOG00000010829	POLR1A	69	33.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000016482	-	82	91.117	ENSAPOG00000006552	polr2a	91	91.106	Acanthochromis_polyacanthus
ENSDNOG00000016482	-	100	96.706	ENSAMEG00000016265	-	100	96.706	Ailuropoda_melanoleuca
ENSDNOG00000016482	-	82	89.019	ENSACIG00000015982	polr2a	81	89.006	Amphilophus_citrinellus
ENSDNOG00000016482	-	97	89.081	ENSAOCG00000004255	polr2a	96	89.067	Amphiprion_ocellaris
ENSDNOG00000016482	-	82	91.178	ENSAPEG00000012623	polr2a	82	91.167	Amphiprion_percula
ENSDNOG00000016482	-	82	91.055	ENSATEG00000019644	polr2a	82	91.620	Anabas_testudineus
ENSDNOG00000016482	-	100	95.736	ENSACAG00000014561	POLR2A	100	95.736	Anolis_carolinensis
ENSDNOG00000016482	-	100	97.005	ENSANAG00000020093	-	100	97.005	Aotus_nancymaae
ENSDNOG00000016482	-	82	90.808	ENSACLG00000006735	polr2a	82	90.797	Astatotilapia_calliptera
ENSDNOG00000016482	-	82	91.178	ENSAMXG00000020046	polr2a	82	91.806	Astyanax_mexicanus
ENSDNOG00000016482	-	100	96.954	ENSBTAG00000046765	POLR2A	100	96.954	Bos_taurus
ENSDNOG00000016482	-	94	69.737	WBGene00000123	ama-1	99	72.727	Caenorhabditis_elegans
ENSDNOG00000016482	-	100	96.548	ENSCAFG00000016532	POLR2A	100	96.548	Canis_familiaris
ENSDNOG00000016482	-	100	96.043	ENSCAFG00020007929	-	100	96.043	Canis_lupus_dingo
ENSDNOG00000016482	-	100	96.954	ENSCHIG00000027173	-	100	96.954	Capra_hircus
ENSDNOG00000016482	-	100	94.518	ENSTSYG00000012803	-	100	95.025	Carlito_syrichta
ENSDNOG00000016482	-	98	92.692	ENSCAPG00000001882	-	99	92.692	Cavia_aperea
ENSDNOG00000016482	-	100	92.653	ENSCPOG00000014812	-	99	92.653	Cavia_porcellus
ENSDNOG00000016482	-	100	97.005	ENSCCAG00000020938	-	100	97.005	Cebus_capucinus
ENSDNOG00000016482	-	100	96.954	ENSCATG00000013680	-	100	96.954	Cercocebus_atys
ENSDNOG00000016482	-	100	96.904	ENSCLAG00000012196	-	100	96.904	Chinchilla_lanigera
ENSDNOG00000016482	-	100	89.444	ENSCSAG00000011644	-	100	89.444	Chlorocebus_sabaeus
ENSDNOG00000016482	-	100	91.168	ENSCPBG00000012697	POLR2A	100	91.168	Chrysemys_picta_bellii
ENSDNOG00000016482	-	99	74.180	ENSCING00000007884	-	99	74.396	Ciona_intestinalis
ENSDNOG00000016482	-	95	83.333	ENSCSAVG00000008334	-	99	83.871	Ciona_savignyi
ENSDNOG00000016482	-	100	96.294	ENSCANG00000010622	-	100	96.294	Colobus_angolensis_palliatus
ENSDNOG00000016482	-	100	91.390	ENSCGRG00001003538	Polr2a	100	91.692	Cricetulus_griseus_chok1gshd
ENSDNOG00000016482	-	96	92.400	ENSCGRG00000012105	Polr2a	100	92.662	Cricetulus_griseus_crigri
ENSDNOG00000016482	-	82	90.253	ENSCSEG00000002635	polr2a	82	90.875	Cynoglossus_semilaevis
ENSDNOG00000016482	-	82	91.754	ENSCVAG00000005156	polr2a	82	91.744	Cyprinodon_variegatus
ENSDNOG00000016482	-	82	91.450	ENSDARG00000099966	polr2a	82	91.439	Danio_rerio
ENSDNOG00000016482	-	100	97.005	ENSDORG00000008667	Polr2a	100	97.005	Dipodomys_ordii
ENSDNOG00000016482	-	99	67.934	FBgn0003277	RpII215	99	72.392	Drosophila_melanogaster
ENSDNOG00000016482	-	94	90.244	ENSETEG00000002540	-	87	91.252	Echinops_telfairi
ENSDNOG00000016482	-	81	83.395	ENSEBUG00000013967	polr2a	82	83.005	Eptatretus_burgeri
ENSDNOG00000016482	-	100	93.959	ENSEASG00005019114	-	100	94.061	Equus_asinus_asinus
ENSDNOG00000016482	-	100	96.954	ENSECAG00000018485	POLR2A	100	96.954	Equus_caballus
ENSDNOG00000016482	-	87	96.078	ENSEEUG00000001154	-	95	96.078	Erinaceus_europaeus
ENSDNOG00000016482	-	88	87.246	ENSELUG00000014284	polr2a	84	87.909	Esox_lucius
ENSDNOG00000016482	-	100	96.954	ENSFDAG00000008287	-	100	96.954	Fukomys_damarensis
ENSDNOG00000016482	-	85	91.754	ENSFHEG00000001768	polr2a	99	91.744	Fundulus_heteroclitus
ENSDNOG00000016482	-	99	87.651	ENSGMOG00000007725	polr2a	100	100.000	Gadus_morhua
ENSDNOG00000016482	-	98	94.366	ENSGAFG00000005389	polr2a	99	91.682	Gambusia_affinis
ENSDNOG00000016482	-	99	88.150	ENSGACG00000019366	polr2a	100	88.986	Gasterosteus_aculeatus
ENSDNOG00000016482	-	100	95.187	ENSGGOG00000014800	-	100	95.187	Gorilla_gorilla
ENSDNOG00000016482	-	85	90.808	ENSHBUG00000018937	polr2a	99	90.797	Haplochromis_burtoni
ENSDNOG00000016482	-	100	96.954	ENSHGLG00000012381	POLR2A	100	96.954	Heterocephalus_glaber_female
ENSDNOG00000016482	-	100	96.954	ENSHGLG00100014843	POLR2A	100	96.954	Heterocephalus_glaber_male
ENSDNOG00000016482	-	82	91.135	ENSHCOG00000011874	polr2a	82	91.124	Hippocampus_comes
ENSDNOG00000016482	-	82	90.623	ENSIPUG00000002613	Polr2a	82	91.248	Ictalurus_punctatus
ENSDNOG00000016482	-	100	97.005	ENSSTOG00000001304	-	100	97.005	Ictidomys_tridecemlineatus
ENSDNOG00000016482	-	100	96.904	ENSJJAG00000013049	Polr2a	100	96.904	Jaculus_jaculus
ENSDNOG00000016482	-	80	82.138	ENSKMAG00000016343	polr2a	85	82.327	Kryptolebias_marmoratus
ENSDNOG00000016482	-	82	91.507	ENSLBEG00000027652	polr2a	82	91.496	Labrus_bergylta
ENSDNOG00000016482	-	80	85.363	ENSLACG00000012071	POLR2A	81	85.417	Latimeria_chalumnae
ENSDNOG00000016482	-	94	88.922	ENSLOCG00000013863	polr2a	99	91.739	Lepisosteus_oculatus
ENSDNOG00000016482	-	100	96.954	ENSLAFG00000008626	-	100	96.954	Loxodonta_africana
ENSDNOG00000016482	-	50	98.063	ENSMFAG00000007042	-	99	98.063	Macaca_fascicularis
ENSDNOG00000016482	-	100	96.954	ENSMMUG00000023620	-	100	96.954	Macaca_mulatta
ENSDNOG00000016482	-	100	96.257	ENSMNEG00000040407	-	100	96.257	Macaca_nemestrina
ENSDNOG00000016482	-	99	92.026	ENSMLEG00000030263	-	99	98.063	Mandrillus_leucophaeus
ENSDNOG00000016482	-	82	91.507	ENSMAMG00000003351	polr2a	82	91.496	Mastacembelus_armatus
ENSDNOG00000016482	-	82	90.808	ENSMZEG00005021429	polr2a	82	90.797	Maylandia_zebra
ENSDNOG00000016482	-	100	96.904	ENSMICG00000013372	-	100	96.904	Microcebus_murinus
ENSDNOG00000016482	-	100	90.954	ENSMOCG00000018279	Polr2a	100	90.509	Microtus_ochrogaster
ENSDNOG00000016482	-	87	90.500	ENSMMOG00000012515	polr2a	95	90.488	Mola_mola
ENSDNOG00000016482	-	100	96.650	ENSMODG00000007009	-	100	96.650	Monodelphis_domestica
ENSDNOG00000016482	-	94	88.116	ENSMALG00000008716	polr2a	99	89.385	Monopterus_albus
ENSDNOG00000016482	-	100	96.954	MGP_CAROLIEiJ_G0016587	Polr2a	100	96.954	Mus_caroli
ENSDNOG00000016482	-	100	96.954	ENSMUSG00000005198	Polr2a	100	96.954	Mus_musculus
ENSDNOG00000016482	-	100	95.195	MGP_PahariEiJ_G0017718	Polr2a	100	95.195	Mus_pahari
ENSDNOG00000016482	-	100	96.954	MGP_SPRETEiJ_G0017423	Polr2a	100	96.954	Mus_spretus
ENSDNOG00000016482	-	100	96.904	ENSMPUG00000009648	-	100	96.904	Mustela_putorius_furo
ENSDNOG00000016482	-	100	96.552	ENSMLUG00000009088	-	100	96.552	Myotis_lucifugus
ENSDNOG00000016482	-	100	97.005	ENSNGAG00000002543	Polr2a	100	97.005	Nannospalax_galili
ENSDNOG00000016482	-	82	88.772	ENSNBRG00000002005	polr2a	81	88.758	Neolamprologus_brichardi
ENSDNOG00000016482	-	100	95.795	ENSNLEG00000009460	-	100	95.795	Nomascus_leucogenys
ENSDNOG00000016482	-	92	99.621	ENSMEUG00000008611	-	89	99.621	Notamacropus_eugenii
ENSDNOG00000016482	-	80	96.083	ENSOPRG00000015116	-	99	96.083	Ochotona_princeps
ENSDNOG00000016482	-	100	92.132	ENSODEG00000017674	-	100	92.234	Octodon_degus
ENSDNOG00000016482	-	82	91.055	ENSONIG00000009231	polr2a	82	91.044	Oreochromis_niloticus
ENSDNOG00000016482	-	99	94.390	ENSOCUG00000017929	-	100	94.390	Oryctolagus_cuniculus
ENSDNOG00000016482	-	82	90.746	ENSORLG00000006431	polr2a	82	91.372	Oryzias_latipes
ENSDNOG00000016482	-	82	90.746	ENSORLG00020010235	polr2a	82	91.372	Oryzias_latipes_hni
ENSDNOG00000016482	-	82	90.746	ENSORLG00015007075	polr2a	82	91.372	Oryzias_latipes_hsok
ENSDNOG00000016482	-	92	90.847	ENSOMEG00000010713	polr2a	100	90.847	Oryzias_melastigma
ENSDNOG00000016482	-	100	96.853	ENSOGAG00000033608	-	100	96.853	Otolemur_garnettii
ENSDNOG00000016482	-	98	96.667	ENSOARG00000013874	-	100	96.667	Ovis_aries
ENSDNOG00000016482	-	100	93.909	ENSPPAG00000043734	-	100	94.416	Pan_paniscus
ENSDNOG00000016482	-	100	95.795	ENSPTRG00000008691	POLR2A	100	95.795	Pan_troglodytes
ENSDNOG00000016482	-	100	96.294	ENSPANG00000024099	-	100	96.294	Papio_anubis
ENSDNOG00000016482	-	77	92.793	ENSPKIG00000005727	polr2a	85	82.000	Paramormyrops_kingsleyae
ENSDNOG00000016482	-	98	93.313	ENSPSIG00000014006	POLR2A	100	93.313	Pelodiscus_sinensis
ENSDNOG00000016482	-	100	91.489	ENSPMGG00000019734	polr2a	99	91.868	Periophthalmus_magnuspinnatus
ENSDNOG00000016482	-	100	97.005	ENSPEMG00000012521	Polr2a	100	97.005	Peromyscus_maniculatus_bairdii
ENSDNOG00000016482	-	96	84.321	ENSPCIG00000028851	-	96	84.321	Phascolarctos_cinereus
ENSDNOG00000016482	-	85	91.178	ENSPFOG00000007890	polr2a	99	91.167	Poecilia_formosa
ENSDNOG00000016482	-	85	91.178	ENSPLAG00000007399	polr2a	99	91.167	Poecilia_latipinna
ENSDNOG00000016482	-	85	91.178	ENSPMEG00000002071	polr2a	99	91.167	Poecilia_mexicana
ENSDNOG00000016482	-	82	91.178	ENSPREG00000013122	polr2a	82	91.167	Poecilia_reticulata
ENSDNOG00000016482	-	100	93.813	ENSPPYG00000007924	-	100	95.943	Pongo_abelii
ENSDNOG00000016482	-	92	99.605	ENSPCAG00000006951	-	92	99.605	Procavia_capensis
ENSDNOG00000016482	-	100	95.819	ENSPCOG00000025260	-	100	95.819	Propithecus_coquereli
ENSDNOG00000016482	-	100	96.751	ENSPVAG00000005069	-	100	96.751	Pteropus_vampyrus
ENSDNOG00000016482	-	82	90.870	ENSPNYG00000022340	polr2a	82	90.859	Pundamilia_nyererei
ENSDNOG00000016482	-	82	91.754	ENSPNAG00000011237	polr2a	82	91.744	Pygocentrus_nattereri
ENSDNOG00000016482	-	100	96.904	ENSRNOG00000028834	Polr2a	100	96.904	Rattus_norvegicus
ENSDNOG00000016482	-	100	91.130	ENSRBIG00000002471	-	100	93.553	Rhinopithecus_bieti
ENSDNOG00000016482	-	100	96.599	ENSRROG00000029583	-	100	96.599	Rhinopithecus_roxellana
ENSDNOG00000016482	-	83	88.000	YDL140C	RPO21	99	80.180	Saccharomyces_cerevisiae
ENSDNOG00000016482	-	100	97.005	ENSSBOG00000000808	-	100	97.005	Saimiri_boliviensis_boliviensis
ENSDNOG00000016482	-	100	93.848	ENSSHAG00000002858	-	100	94.162	Sarcophilus_harrisii
ENSDNOG00000016482	-	82	91.631	ENSSFOG00015023275	polr2a	82	91.434	Scleropages_formosus
ENSDNOG00000016482	-	82	91.135	ENSSMAG00000009137	polr2a	82	91.124	Scophthalmus_maximus
ENSDNOG00000016482	-	82	91.692	ENSSDUG00000020466	polr2a	82	91.682	Seriola_dumerili
ENSDNOG00000016482	-	82	91.692	ENSSLDG00000020613	polr2a	82	91.682	Seriola_lalandi_dorsalis
ENSDNOG00000016482	-	93	99.694	ENSSARG00000005875	-	95	99.694	Sorex_araneus
ENSDNOG00000016482	-	100	91.117	ENSSPAG00000016741	polr2a	94	91.106	Stegastes_partitus
ENSDNOG00000016482	-	100	96.244	ENSSSCG00000028278	-	100	96.244	Sus_scrofa
ENSDNOG00000016482	-	99	85.865	ENSTRUG00000012320	polr2a	81	85.847	Takifugu_rubripes
ENSDNOG00000016482	-	99	90.205	ENSTNIG00000010136	polr2a	100	90.130	Tetraodon_nigroviridis
ENSDNOG00000016482	-	74	99.441	ENSTBEG00000013294	-	58	99.441	Tupaia_belangeri
ENSDNOG00000016482	-	100	95.431	ENSTTRG00000014273	-	100	95.431	Tursiops_truncatus
ENSDNOG00000016482	-	96	91.985	ENSUAMG00000014866	-	100	93.075	Ursus_americanus
ENSDNOG00000016482	-	99	93.921	ENSUMAG00000015732	-	100	93.921	Ursus_maritimus
ENSDNOG00000016482	-	65	100.000	ENSVPAG00000008842	-	76	100.000	Vicugna_pacos
ENSDNOG00000016482	-	100	93.614	ENSVVUG00000027878	-	100	95.533	Vulpes_vulpes
ENSDNOG00000016482	-	99	94.302	ENSXETG00000012465	polr2a	100	94.302	Xenopus_tropicalis
ENSDNOG00000016482	-	89	92.105	ENSXCOG00000001804	polr2a	94	88.944	Xiphophorus_couchianus
ENSDNOG00000016482	-	82	91.117	ENSXMAG00000015687	polr2a	82	91.106	Xiphophorus_maculatus