EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSDNOG00000017218 (Gene tree)
Gene ID
101416492
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Dasypus_novemcinctus
Status
putative
Strand
Minus strand
Length
52852 bases
Position
chrJH582994.1:604909-657760
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDNOP00000013346tRNA_anti-codonPF01336.252.3e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDNOT00000017220RPA1-2011851-ENSDNOP00000013346616 (aa)-UPI0003CBF5CB
Gene Model
Click here to download ENSDNOG00000017218's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000017218's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDNOG00000017218RPA19962.171ENSAPOG00000011658rpa19962.336Acanthochromis_polyacanthus
ENSDNOG00000017218RPA18663.991ENSAPOG00000019409RPA18063.991Acanthochromis_polyacanthus
ENSDNOG00000017218RPA19891.570ENSAMEG00000007706RPA19891.570Ailuropoda_melanoleuca
ENSDNOG00000017218RPA19557.627ENSACIG00000012881RPA19957.627Amphilophus_citrinellus
ENSDNOG00000017218RPA19558.333ENSACIG00000007277rpa19958.333Amphilophus_citrinellus
ENSDNOG00000017218RPA19654.660ENSAOCG00000009003RPA19755.873Amphiprion_ocellaris
ENSDNOG00000017218RPA19962.993ENSAOCG00000023376rpa110063.683Amphiprion_ocellaris
ENSDNOG00000017218RPA19654.193ENSAPEG00000019132RPA19754.884Amphiprion_percula
ENSDNOG00000017218RPA19962.829ENSAPEG00000008634rpa19963.511Amphiprion_percula
ENSDNOG00000017218RPA19564.041ENSATEG00000022024rpa110064.041Anabas_testudineus
ENSDNOG00000017218RPA19854.884ENSATEG00000006443RPA19954.884Anabas_testudineus
ENSDNOG00000017218RPA19864.993ENSAPLG00000012442RPA110064.993Anas_platyrhynchos
ENSDNOG00000017218RPA19862.866ENSACAG00000014490RPA19863.072Anolis_carolinensis
ENSDNOG00000017218RPA19889.185ENSANAG00000023456RPA19989.185Aotus_nancymaae
ENSDNOG00000017218RPA19364.808ENSACLG00000006640rpa19964.808Astatotilapia_calliptera
ENSDNOG00000017218RPA19857.413ENSACLG00000005223RPA19957.413Astatotilapia_calliptera
ENSDNOG00000017218RPA19962.562ENSAMXG00000008418rpa19962.623Astyanax_mexicanus
ENSDNOG00000017218RPA19991.598ENSBTAG00000009711RPA19991.598Bos_taurus
ENSDNOG00000017218RPA17630.526WBGene00017546rpa-17130.105Caenorhabditis_elegans
ENSDNOG00000017218RPA19888.779ENSCJAG00000001848RPA19888.779Callithrix_jacchus
ENSDNOG00000017218RPA19990.774ENSCAFG00000019249RPA19990.774Canis_familiaris
ENSDNOG00000017218RPA19990.774ENSCAFG00020009847RPA19990.774Canis_lupus_dingo
ENSDNOG00000017218RPA19891.419ENSCHIG00000026308RPA19891.419Capra_hircus
ENSDNOG00000017218RPA19990.625ENSTSYG00000003482-9990.625Carlito_syrichta
ENSDNOG00000017218RPA19886.799ENSCPOG00000000035RPA19886.799Cavia_porcellus
ENSDNOG00000017218RPA19878.325ENSCCAG00000010981RPA19878.325Cebus_capucinus
ENSDNOG00000017218RPA19887.954ENSCLAG00000005185-9987.954Chinchilla_lanigera
ENSDNOG00000017218RPA19883.498ENSCLAG00000015045-9883.498Chinchilla_lanigera
ENSDNOG00000017218RPA19877.833ENSCSAG00000013833RPA19878.361Chlorocebus_sabaeus
ENSDNOG00000017218RPA19593.186ENSCHOG00000013540-9993.186Choloepus_hoffmanni
ENSDNOG00000017218RPA17196.804ENSCHOG00000009454-9996.804Choloepus_hoffmanni
ENSDNOG00000017218RPA19977.961ENSCPBG00000020377RPA19978.634Chrysemys_picta_bellii
ENSDNOG00000017218RPA19841.680ENSCING00000023482-9841.680Ciona_intestinalis
ENSDNOG00000017218RPA19886.401ENSCANG00000030911RPA19986.401Colobus_angolensis_palliatus
ENSDNOG00000017218RPA19987.217ENSCGRG00001008197Rpa19988.197Cricetulus_griseus_chok1gshd
ENSDNOG00000017218RPA18187.377ENSCGRG00000000582Rpa19987.377Cricetulus_griseus_crigri
ENSDNOG00000017218RPA19960.855ENSCSEG00000013066rpa19960.855Cynoglossus_semilaevis
ENSDNOG00000017218RPA19852.258ENSCSEG00000012726RPA19853.608Cynoglossus_semilaevis
ENSDNOG00000017218RPA19864.298ENSCVAG00000019431rpa19964.437Cyprinodon_variegatus
ENSDNOG00000017218RPA19155.016ENSCVAG00000013446-9255.016Cyprinodon_variegatus
ENSDNOG00000017218RPA19864.404ENSDARG00000003938rpa19864.404Danio_rerio
ENSDNOG00000017218RPA19989.292ENSDORG00000006199Rpa19989.292Dipodomys_ordii
ENSDNOG00000017218RPA19741.776FBgn0010173RpA-709742.434Drosophila_melanogaster
ENSDNOG00000017218RPA18188.660ENSETEG00000017608RPA18188.660Echinops_telfairi
ENSDNOG00000017218RPA19891.074ENSEASG00005009372RPA19891.074Equus_asinus_asinus
ENSDNOG00000017218RPA19990.894ENSECAG00000023886RPA19990.894Equus_caballus
ENSDNOG00000017218RPA16892.124ENSEEUG00000002186-6892.124Erinaceus_europaeus
ENSDNOG00000017218RPA18857.721ENSELUG00000006136RPA19957.721Esox_lucius
ENSDNOG00000017218RPA19962.459ENSELUG00000021071rpa19862.623Esox_lucius
ENSDNOG00000017218RPA19990.296ENSFCAG00000006306RPA19890.296Felis_catus
ENSDNOG00000017218RPA19875.041ENSFALG00000006575RPA19875.041Ficedula_albicollis
ENSDNOG00000017218RPA19888.449ENSFDAG00000007720RPA19988.449Fukomys_damarensis
ENSDNOG00000017218RPA19663.158ENSFHEG00000003580rpa19663.158Fundulus_heteroclitus
ENSDNOG00000017218RPA19660.135ENSGMOG00000010382rpa19660.135Gadus_morhua
ENSDNOG00000017218RPA19875.658ENSGALG00000003072RPA19875.658Gallus_gallus
ENSDNOG00000017218RPA19862.852ENSGAFG00000012916rpa19862.852Gambusia_affinis
ENSDNOG00000017218RPA19953.506ENSGAFG00000020953RPA19954.141Gambusia_affinis
ENSDNOG00000017218RPA19962.562ENSGACG00000010856rpa19962.562Gasterosteus_aculeatus
ENSDNOG00000017218RPA19977.961ENSGAGG00000013611RPA19877.961Gopherus_agassizii
ENSDNOG00000017218RPA19986.656ENSGGOG00000014186RPA19886.656Gorilla_gorilla
ENSDNOG00000017218RPA19653.255ENSHBUG00000009348RPA19953.255Haplochromis_burtoni
ENSDNOG00000017218RPA19664.418ENSHBUG00000017773rpa19664.418Haplochromis_burtoni
ENSDNOG00000017218RPA19888.284ENSHGLG00000008846RPA19988.284Heterocephalus_glaber_female
ENSDNOG00000017218RPA19888.284ENSHGLG00100017755-9988.284Heterocephalus_glaber_male
ENSDNOG00000017218RPA19875.413ENSHGLG00100002005-9875.413Heterocephalus_glaber_male
ENSDNOG00000017218RPA19983.526ENSHGLG00100000799-9883.526Heterocephalus_glaber_male
ENSDNOG00000017218RPA19844.715ENSHCOG00000000351RPA19744.715Hippocampus_comes
ENSDNOG00000017218RPA19861.450ENSHCOG00000001401rpa19861.779Hippocampus_comes
ENSDNOG00000017218RPA19962.664ENSIPUG00000004400rpa19962.664Ictalurus_punctatus
ENSDNOG00000017218RPA19982.362ENSSTOG00000022475RPA19982.362Ictidomys_tridecemlineatus
ENSDNOG00000017218RPA19589.097ENSJJAG00000000876Rpa19889.097Jaculus_jaculus
ENSDNOG00000017218RPA19655.611ENSKMAG00000000234RPA19655.611Kryptolebias_marmoratus
ENSDNOG00000017218RPA19861.779ENSKMAG00000005605rpa19862.438Kryptolebias_marmoratus
ENSDNOG00000017218RPA19663.007ENSLBEG00000021604rpa19663.007Labrus_bergylta
ENSDNOG00000017218RPA19463.492ENSLBEG00000002281RPA18463.492Labrus_bergylta
ENSDNOG00000017218RPA18166.335ENSLACG00000007210RPA19966.335Latimeria_chalumnae
ENSDNOG00000017218RPA19867.987ENSLOCG00000006397rpa19867.987Lepisosteus_oculatus
ENSDNOG00000017218RPA19891.340ENSLAFG00000015354RPA19891.340Loxodonta_africana
ENSDNOG00000017218RPA18289.921ENSMFAG00000036138-10090.533Macaca_fascicularis
ENSDNOG00000017218RPA19889.718ENSMMUG00000011604-9990.232Macaca_mulatta
ENSDNOG00000017218RPA19882.178ENSMMUG00000002442-9882.178Macaca_mulatta
ENSDNOG00000017218RPA19588.435ENSMNEG00000031632-9888.964Macaca_nemestrina
ENSDNOG00000017218RPA18786.567ENSMNEG00000029837-9886.567Macaca_nemestrina
ENSDNOG00000017218RPA19883.940ENSMLEG00000038768-9984.463Mandrillus_leucophaeus
ENSDNOG00000017218RPA19851.051ENSMAMG00000020097RPA19951.051Mastacembelus_armatus
ENSDNOG00000017218RPA19664.250ENSMAMG00000017993rpa19963.167Mastacembelus_armatus
ENSDNOG00000017218RPA19863.516ENSMZEG00005007551rpa19863.516Maylandia_zebra
ENSDNOG00000017218RPA19857.413ENSMZEG00005024731RPA19957.413Maylandia_zebra
ENSDNOG00000017218RPA19875.537ENSMGAG00000005315RPA19875.537Meleagris_gallopavo
ENSDNOG00000017218RPA19789.667ENSMAUG00000010474Rpa19989.667Mesocricetus_auratus
ENSDNOG00000017218RPA19991.598ENSMICG00000012867RPA19991.598Microcebus_murinus
ENSDNOG00000017218RPA19888.264ENSMOCG00000013019Rpa19988.264Microtus_ochrogaster
ENSDNOG00000017218RPA19663.300ENSMMOG00000014292rpa19963.300Mola_mola
ENSDNOG00000017218RPA19756.427ENSMMOG00000010868RPA19761.148Mola_mola
ENSDNOG00000017218RPA19985.691ENSMODG00000010549RPA19885.691Monodelphis_domestica
ENSDNOG00000017218RPA19963.487ENSMALG00000011453rpa19963.651Monopterus_albus
ENSDNOG00000017218RPA19363.326ENSMALG00000001208RPA18063.326Monopterus_albus
ENSDNOG00000017218RPA19887.171MGP_CAROLIEiJ_G0016734Rpa19987.171Mus_caroli
ENSDNOG00000017218RPA19885.016ENSMUSG00000000751Rpa19985.016Mus_musculus
ENSDNOG00000017218RPA19987.399MGP_PahariEiJ_G0017871Rpa19988.380Mus_pahari
ENSDNOG00000017218RPA19885.041MGP_SPRETEiJ_G0017577Rpa19985.041Mus_spretus
ENSDNOG00000017218RPA19990.610ENSMPUG00000013119RPA19989.593Mustela_putorius_furo
ENSDNOG00000017218RPA19788.629ENSMLUG00000006113RPA19688.629Myotis_lucifugus
ENSDNOG00000017218RPA19588.435ENSNGAG00000004522Rpa19488.435Nannospalax_galili
ENSDNOG00000017218RPA19464.483ENSNBRG00000020595rpa19964.483Neolamprologus_brichardi
ENSDNOG00000017218RPA19655.987ENSNBRG00000009672RPA19555.987Neolamprologus_brichardi
ENSDNOG00000017218RPA19988.633ENSNLEG00000017149RPA19988.633Nomascus_leucogenys
ENSDNOG00000017218RPA19875.083ENSMEUG00000006714RPA19975.083Notamacropus_eugenii
ENSDNOG00000017218RPA19585.378ENSODEG00000009038RPA19685.378Octodon_degus
ENSDNOG00000017218RPA19863.666ENSONIG00000013135rpa19863.666Oreochromis_niloticus
ENSDNOG00000017218RPA19884.437ENSOANG00000010880RPA19984.603Ornithorhynchus_anatinus
ENSDNOG00000017218RPA19985.870ENSOCUG00000001504RPA19985.870Oryctolagus_cuniculus
ENSDNOG00000017218RPA19854.615ENSORLG00000003368RPA19954.615Oryzias_latipes
ENSDNOG00000017218RPA19963.158ENSORLG00000004856rpa19962.932Oryzias_latipes
ENSDNOG00000017218RPA19963.097ENSORLG00020008980rpa19963.097Oryzias_latipes_hni
ENSDNOG00000017218RPA19853.323ENSORLG00020015284RPA19953.323Oryzias_latipes_hni
ENSDNOG00000017218RPA19963.097ENSORLG00015013982rpa19963.097Oryzias_latipes_hsok
ENSDNOG00000017218RPA16762.560ENSORLG00015005867-9462.560Oryzias_latipes_hsok
ENSDNOG00000017218RPA19854.702ENSORLG00015020383RPA19954.702Oryzias_latipes_hsok
ENSDNOG00000017218RPA19456.089ENSOMEG00000011040RPA19956.089Oryzias_melastigma
ENSDNOG00000017218RPA19961.184ENSOMEG00000004704rpa19961.184Oryzias_melastigma
ENSDNOG00000017218RPA19990.115ENSOGAG00000005581-9990.115Otolemur_garnettii
ENSDNOG00000017218RPA19387.004ENSOGAG00000029379-9893.085Otolemur_garnettii
ENSDNOG00000017218RPA19991.269ENSOARG00000014479RPA19891.419Ovis_aries
ENSDNOG00000017218RPA19988.962ENSPPAG00000039680RPA19988.962Pan_paniscus
ENSDNOG00000017218RPA19990.296ENSPPRG00000011807RPA19890.296Panthera_pardus
ENSDNOG00000017218RPA19989.967ENSPTIG00000007898RPA19889.967Panthera_tigris_altaica
ENSDNOG00000017218RPA19988.962ENSPTRG00000008539RPA19988.962Pan_troglodytes
ENSDNOG00000017218RPA19889.552ENSPANG00000024592RPA19889.951Papio_anubis
ENSDNOG00000017218RPA19363.368ENSPKIG00000008053rpa19363.889Paramormyrops_kingsleyae
ENSDNOG00000017218RPA19877.741ENSPSIG00000015617RPA19977.741Pelodiscus_sinensis
ENSDNOG00000017218RPA19456.131ENSPMGG00000000543RPA19957.293Periophthalmus_magnuspinnatus
ENSDNOG00000017218RPA19862.687ENSPMGG00000011589rpa19962.852Periophthalmus_magnuspinnatus
ENSDNOG00000017218RPA19987.602ENSPEMG00000021061Rpa19987.602Peromyscus_maniculatus_bairdii
ENSDNOG00000017218RPA19883.196ENSPCIG00000019049RPA19883.855Phascolarctos_cinereus
ENSDNOG00000017218RPA19863.079ENSPFOG00000003987rpa19863.079Poecilia_formosa
ENSDNOG00000017218RPA19354.472ENSPLAG00000008844-9654.472Poecilia_latipinna
ENSDNOG00000017218RPA19862.914ENSPLAG00000004984rpa19862.914Poecilia_latipinna
ENSDNOG00000017218RPA19863.245ENSPMEG00000020602rpa19963.763Poecilia_mexicana
ENSDNOG00000017218RPA19353.997ENSPMEG00000003627-9554.723Poecilia_mexicana
ENSDNOG00000017218RPA19256.239ENSPREG00000010174rpa19556.437Poecilia_reticulata
ENSDNOG00000017218RPA19759.426ENSPREG00000010119RPA19459.426Poecilia_reticulata
ENSDNOG00000017218RPA19991.598ENSPCOG00000001799RPA19991.598Propithecus_coquereli
ENSDNOG00000017218RPA19990.610ENSPVAG00000002149RPA19990.610Pteropus_vampyrus
ENSDNOG00000017218RPA19664.587ENSPNYG00000016316rpa19964.757Pundamilia_nyererei
ENSDNOG00000017218RPA19857.098ENSPNYG00000024165RPA19957.098Pundamilia_nyererei
ENSDNOG00000017218RPA19855.702ENSPNAG00000008599rpa19657.290Pygocentrus_nattereri
ENSDNOG00000017218RPA19888.430ENSRNOG00000003123Rpa19987.439Rattus_norvegicus
ENSDNOG00000017218RPA19888.944ENSRBIG00000036587RPA19888.944Rhinopithecus_bieti
ENSDNOG00000017218RPA19883.498ENSRROG00000043278RPA19883.498Rhinopithecus_roxellana
ENSDNOG00000017218RPA16838.588YAR007CRFA16838.588Saccharomyces_cerevisiae
ENSDNOG00000017218RPA19885.382ENSSBOG00000030233RPA19985.382Saimiri_boliviensis_boliviensis
ENSDNOG00000017218RPA19885.033ENSSHAG00000007969RPA19885.362Sarcophilus_harrisii
ENSDNOG00000017218RPA19966.174ENSSFOG00015005362rpa19166.174Scleropages_formosus
ENSDNOG00000017218RPA19851.908ENSSMAG00000019746RPA19951.756Scophthalmus_maximus
ENSDNOG00000017218RPA19665.261ENSSDUG00000011949rpa19765.261Seriola_dumerili
ENSDNOG00000017218RPA18866.051ENSSDUG00000016358RPA18365.826Seriola_dumerili
ENSDNOG00000017218RPA18865.893ENSSLDG00000020784RPA18365.668Seriola_lalandi_dorsalis
ENSDNOG00000017218RPA19665.430ENSSLDG00000011806rpa19765.430Seriola_lalandi_dorsalis
ENSDNOG00000017218RPA19870.315ENSSARG00000007506RPA19970.315Sorex_araneus
ENSDNOG00000017218RPA19773.534ENSSPUG00000007223RPA19973.534Sphenodon_punctatus
ENSDNOG00000017218RPA19962.664ENSSPAG00000009903rpa19962.664Stegastes_partitus
ENSDNOG00000017218RPA19658.361ENSSPAG00000011165RPA19759.215Stegastes_partitus
ENSDNOG00000017218RPA19891.181ENSSSCG00000017822RPA19991.181Sus_scrofa
ENSDNOG00000017218RPA19874.629ENSTGUG00000005775RPA19874.629Taeniopygia_guttata
ENSDNOG00000017218RPA19963.816ENSTRUG00000003616rpa19963.816Takifugu_rubripes
ENSDNOG00000017218RPA18862.818ENSTRUG00000000405RPA18457.809Takifugu_rubripes
ENSDNOG00000017218RPA19964.379ENSTNIG00000016199rpa19964.379Tetraodon_nigroviridis
ENSDNOG00000017218RPA18797.674ENSTBEG00000002709RPA18897.674Tupaia_belangeri
ENSDNOG00000017218RPA19989.106ENSTTRG00000001169RPA19989.251Tursiops_truncatus
ENSDNOG00000017218RPA18898.077ENSUAMG00000015676RPA19798.077Ursus_americanus
ENSDNOG00000017218RPA19991.598ENSUMAG00000009328RPA19991.598Ursus_maritimus
ENSDNOG00000017218RPA19889.274ENSVPAG00000009443RPA19989.274Vicugna_pacos
ENSDNOG00000017218RPA19990.774ENSVVUG00000021715RPA19990.774Vulpes_vulpes
ENSDNOG00000017218RPA19973.684ENSXETG00000013538rpa19874.548Xenopus_tropicalis
ENSDNOG00000017218RPA19161.896ENSXCOG00000010068rpa19462.050Xiphophorus_couchianus
ENSDNOG00000017218RPA19556.068ENSXCOG00000009899-9956.068Xiphophorus_couchianus
ENSDNOG00000017218RPA18964.220ENSXMAG00000010333RPA18464.220Xiphophorus_maculatus
ENSDNOG00000017218RPA19861.755ENSXMAG00000004102rpa19963.204Xiphophorus_maculatus

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