EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000018160 (Gene tree)
Gene ID: 101412849
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 132354 bases
Position: chrJH570052.1:1744514-1876867
Accession: 101412849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000014089	Upf2	PF04050.14	6.6e-33	1	1
ENSDNOP00000022628	Upf2	PF04050.14	6.6e-33	1	1
ENSDNOP00000014089	MIF4G	PF02854.19	2.4e-76	1	3
ENSDNOP00000014089	MIF4G	PF02854.19	2.4e-76	2	3
ENSDNOP00000014089	MIF4G	PF02854.19	2.4e-76	3	3
ENSDNOP00000022628	MIF4G	PF02854.19	2.4e-76	1	3
ENSDNOP00000022628	MIF4G	PF02854.19	2.4e-76	2	3
ENSDNOP00000022628	MIF4G	PF02854.19	2.4e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000018161	UPF2-202	3983	XM_004468868	ENSDNOP00000014089	1271 (aa)	XP_004468922	UPI000328F458
ENSDNOT00000052210	UPF2-201	4196	-	ENSDNOP00000022628	1271 (aa)	XP_004468922	UPI000328F458

Gene Model

Click here to download ENSDNOG00000018160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000018160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000018160	UPF2	100	97.720	ENSG00000151461	UPF2	100	97.720	Homo_sapiens
ENSDNOG00000018160	UPF2	99	78.778	ENSAPOG00000015837	UPF2	100	78.622	Acanthochromis_polyacanthus
ENSDNOG00000018160	UPF2	100	98.741	ENSAMEG00000004586	UPF2	100	98.741	Ailuropoda_melanoleuca
ENSDNOG00000018160	UPF2	99	82.734	ENSACIG00000018078	UPF2	100	82.656	Amphilophus_citrinellus
ENSDNOG00000018160	UPF2	100	82.917	ENSAOCG00000016766	UPF2	100	82.995	Amphiprion_ocellaris
ENSDNOG00000018160	UPF2	100	82.995	ENSAPEG00000019084	UPF2	100	83.073	Amphiprion_percula
ENSDNOG00000018160	UPF2	100	82.737	ENSATEG00000021677	UPF2	99	82.788	Anabas_testudineus
ENSDNOG00000018160	UPF2	100	86.950	ENSAPLG00000010287	UPF2	90	91.225	Anas_platyrhynchos
ENSDNOG00000018160	UPF2	100	92.290	ENSACAG00000009259	UPF2	100	92.290	Anolis_carolinensis
ENSDNOG00000018160	UPF2	99	87.657	ENSANAG00000028451	UPF2	99	86.478	Aotus_nancymaae
ENSDNOG00000018160	UPF2	100	81.045	ENSACLG00000012696	UPF2	100	82.917	Astatotilapia_calliptera
ENSDNOG00000018160	UPF2	99	82.877	ENSAMXG00000013700	UPF2	99	83.190	Astyanax_mexicanus
ENSDNOG00000018160	UPF2	100	98.505	ENSBTAG00000000288	UPF2	100	98.505	Bos_taurus
ENSDNOG00000018160	UPF2	100	97.642	ENSCJAG00000020685	UPF2	100	97.642	Callithrix_jacchus
ENSDNOG00000018160	UPF2	100	98.741	ENSCAFG00000004839	UPF2	100	98.741	Canis_familiaris
ENSDNOG00000018160	UPF2	99	96.375	ENSCAFG00020005882	UPF2	98	98.615	Canis_lupus_dingo
ENSDNOG00000018160	UPF2	100	98.584	ENSCHIG00000020359	UPF2	100	98.584	Capra_hircus
ENSDNOG00000018160	UPF2	100	97.325	ENSTSYG00000000935	UPF2	100	97.325	Carlito_syrichta
ENSDNOG00000018160	UPF2	91	87.177	ENSCAPG00000016658	UPF2	95	86.747	Cavia_aperea
ENSDNOG00000018160	UPF2	99	95.956	ENSCPOG00000008809	UPF2	99	95.956	Cavia_porcellus
ENSDNOG00000018160	UPF2	100	92.138	ENSCCAG00000035991	UPF2	100	92.138	Cebus_capucinus
ENSDNOG00000018160	UPF2	100	97.877	ENSCATG00000032679	UPF2	100	97.877	Cercocebus_atys
ENSDNOG00000018160	UPF2	100	97.561	ENSCLAG00000011434	UPF2	100	97.561	Chinchilla_lanigera
ENSDNOG00000018160	UPF2	100	97.956	ENSCSAG00000013372	UPF2	100	97.956	Chlorocebus_sabaeus
ENSDNOG00000018160	UPF2	87	99.554	ENSCHOG00000000422	UPF2	89	99.554	Choloepus_hoffmanni
ENSDNOG00000018160	UPF2	99	93.223	ENSCPBG00000027823	UPF2	100	93.065	Chrysemys_picta_bellii
ENSDNOG00000018160	UPF2	79	48.766	ENSCSAVG00000007772	-	79	50.573	Ciona_savignyi
ENSDNOG00000018160	UPF2	99	91.562	ENSCANG00000040396	UPF2	100	92.211	Colobus_angolensis_palliatus
ENSDNOG00000018160	UPF2	100	97.954	ENSCGRG00001019347	Upf2	100	97.954	Cricetulus_griseus_chok1gshd
ENSDNOG00000018160	UPF2	100	97.954	ENSCGRG00000017993	Upf2	100	97.954	Cricetulus_griseus_crigri
ENSDNOG00000018160	UPF2	91	80.776	ENSCSEG00000003520	UPF2	71	83.038	Cynoglossus_semilaevis
ENSDNOG00000018160	UPF2	99	82.875	ENSCVAG00000006167	UPF2	100	82.325	Cyprinodon_variegatus
ENSDNOG00000018160	UPF2	100	97.482	ENSDORG00000002478	Upf2	100	97.482	Dipodomys_ordii
ENSDNOG00000018160	UPF2	89	36.228	FBgn0029992	Upf2	82	42.105	Drosophila_melanogaster
ENSDNOG00000018160	UPF2	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSDNOG00000018160	UPF2	69	68.358	ENSEBUG00000012448	-	87	71.141	Eptatretus_burgeri
ENSDNOG00000018160	UPF2	100	98.662	ENSEASG00005019274	UPF2	100	98.662	Equus_asinus_asinus
ENSDNOG00000018160	UPF2	100	98.741	ENSECAG00000017022	UPF2	100	98.741	Equus_caballus
ENSDNOG00000018160	UPF2	82	94.569	ENSEEUG00000007819	UPF2	82	94.569	Erinaceus_europaeus
ENSDNOG00000018160	UPF2	99	81.783	ENSELUG00000012014	UPF2	100	82.193	Esox_lucius
ENSDNOG00000018160	UPF2	100	98.584	ENSFCAG00000005785	UPF2	100	98.584	Felis_catus
ENSDNOG00000018160	UPF2	100	93.784	ENSFALG00000001889	UPF2	98	93.784	Ficedula_albicollis
ENSDNOG00000018160	UPF2	100	97.246	ENSFDAG00000014348	UPF2	100	97.246	Fukomys_damarensis
ENSDNOG00000018160	UPF2	99	83.399	ENSFHEG00000009826	UPF2	99	82.977	Fundulus_heteroclitus
ENSDNOG00000018160	UPF2	91	83.592	ENSGMOG00000005557	UPF2	100	80.250	Gadus_morhua
ENSDNOG00000018160	UPF2	100	94.025	ENSGALG00000033772	UPF2	100	94.025	Gallus_gallus
ENSDNOG00000018160	UPF2	100	79.953	ENSGAFG00000020867	UPF2	100	81.825	Gambusia_affinis
ENSDNOG00000018160	UPF2	90	84.556	ENSGACG00000001080	UPF2	100	82.500	Gasterosteus_aculeatus
ENSDNOG00000018160	UPF2	100	93.470	ENSGAGG00000002700	UPF2	100	93.470	Gopherus_agassizii
ENSDNOG00000018160	UPF2	100	97.720	ENSGGOG00000001479	UPF2	100	97.720	Gorilla_gorilla
ENSDNOG00000018160	UPF2	100	80.889	ENSHBUG00000004249	UPF2	100	82.891	Haplochromis_burtoni
ENSDNOG00000018160	UPF2	100	97.640	ENSHGLG00000015176	-	100	97.640	Heterocephalus_glaber_female
ENSDNOG00000018160	UPF2	99	86.693	ENSHGLG00000003822	-	99	85.433	Heterocephalus_glaber_female
ENSDNOG00000018160	UPF2	99	94.405	ENSHGLG00100010036	UPF2	100	93.538	Heterocephalus_glaber_male
ENSDNOG00000018160	UPF2	100	80.963	ENSHCOG00000004025	UPF2	99	80.963	Hippocampus_comes
ENSDNOG00000018160	UPF2	100	82.215	ENSIPUG00000015524	UPF2	100	82.436	Ictalurus_punctatus
ENSDNOG00000018160	UPF2	100	97.954	ENSSTOG00000013075	UPF2	100	97.954	Ictidomys_tridecemlineatus
ENSDNOG00000018160	UPF2	100	96.696	ENSJJAG00000004913	Upf2	100	96.696	Jaculus_jaculus
ENSDNOG00000018160	UPF2	92	84.766	ENSKMAG00000001071	UPF2	99	82.805	Kryptolebias_marmoratus
ENSDNOG00000018160	UPF2	80	82.711	ENSLBEG00000000728	-	93	82.809	Labrus_bergylta
ENSDNOG00000018160	UPF2	100	83.061	ENSLBEG00000016394	-	99	83.113	Labrus_bergylta
ENSDNOG00000018160	UPF2	99	79.859	ENSLACG00000015945	UPF2	100	79.781	Latimeria_chalumnae
ENSDNOG00000018160	UPF2	99	86.446	ENSLOCG00000015698	UPF2	100	86.367	Lepisosteus_oculatus
ENSDNOG00000018160	UPF2	100	97.799	ENSMFAG00000043865	UPF2	100	97.799	Macaca_fascicularis
ENSDNOG00000018160	UPF2	100	97.799	ENSMMUG00000008241	UPF2	100	97.799	Macaca_mulatta
ENSDNOG00000018160	UPF2	81	97.268	ENSMNEG00000008062	UPF2	100	97.268	Macaca_nemestrina
ENSDNOG00000018160	UPF2	95	99.034	ENSMLEG00000036120	UPF2	100	99.034	Mandrillus_leucophaeus
ENSDNOG00000018160	UPF2	100	82.582	ENSMAMG00000018276	UPF2	100	82.710	Mastacembelus_armatus
ENSDNOG00000018160	UPF2	100	81.045	ENSMZEG00005021595	UPF2	100	82.917	Maylandia_zebra
ENSDNOG00000018160	UPF2	99	93.155	ENSMGAG00000004573	UPF2	99	93.155	Meleagris_gallopavo
ENSDNOG00000018160	UPF2	100	95.594	ENSMAUG00000016512	Upf2	100	95.594	Mesocricetus_auratus
ENSDNOG00000018160	UPF2	95	98.469	ENSMICG00000001716	UPF2	99	98.446	Microcebus_murinus
ENSDNOG00000018160	UPF2	100	97.010	ENSMOCG00000008263	Upf2	100	97.010	Microtus_ochrogaster
ENSDNOG00000018160	UPF2	90	83.116	ENSMMOG00000006528	UPF2	100	79.359	Mola_mola
ENSDNOG00000018160	UPF2	100	96.145	ENSMODG00000016794	UPF2	100	96.145	Monodelphis_domestica
ENSDNOG00000018160	UPF2	99	82.565	ENSMALG00000002663	UPF2	100	82.459	Monopterus_albus
ENSDNOG00000018160	UPF2	100	97.246	MGP_CAROLIEiJ_G0023157	Upf2	100	97.817	Mus_caroli
ENSDNOG00000018160	UPF2	100	97.246	ENSMUSG00000043241	Upf2	100	97.246	Mus_musculus
ENSDNOG00000018160	UPF2	100	97.168	MGP_PahariEiJ_G0019217	Upf2	100	97.168	Mus_pahari
ENSDNOG00000018160	UPF2	100	97.482	MGP_SPRETEiJ_G0024075	Upf2	100	97.482	Mus_spretus
ENSDNOG00000018160	UPF2	100	98.741	ENSMPUG00000001064	UPF2	100	98.741	Mustela_putorius_furo
ENSDNOG00000018160	UPF2	99	97.800	ENSMLUG00000000228	UPF2	100	97.800	Myotis_lucifugus
ENSDNOG00000018160	UPF2	100	81.045	ENSNBRG00000013629	UPF2	100	82.917	Neolamprologus_brichardi
ENSDNOG00000018160	UPF2	100	97.720	ENSNLEG00000012058	UPF2	100	97.720	Nomascus_leucogenys
ENSDNOG00000018160	UPF2	56	97.927	ENSMEUG00000002180	-	59	97.927	Notamacropus_eugenii
ENSDNOG00000018160	UPF2	82	100.000	ENSOPRG00000006801	-	82	100.000	Ochotona_princeps
ENSDNOG00000018160	UPF2	100	97.089	ENSODEG00000001290	UPF2	100	97.089	Octodon_degus
ENSDNOG00000018160	UPF2	100	81.123	ENSONIG00000017991	UPF2	100	82.995	Oreochromis_niloticus
ENSDNOG00000018160	UPF2	99	97.649	ENSOCUG00000006230	UPF2	100	97.649	Oryctolagus_cuniculus
ENSDNOG00000018160	UPF2	100	81.323	ENSORLG00000017189	UPF2	100	81.903	Oryzias_latipes
ENSDNOG00000018160	UPF2	100	81.323	ENSORLG00020005969	UPF2	100	81.903	Oryzias_latipes_hni
ENSDNOG00000018160	UPF2	100	81.323	ENSORLG00015005713	UPF2	100	81.903	Oryzias_latipes_hsok
ENSDNOG00000018160	UPF2	99	77.847	ENSOMEG00000023420	UPF2	98	79.203	Oryzias_melastigma
ENSDNOG00000018160	UPF2	100	97.640	ENSOGAG00000005796	UPF2	100	97.640	Otolemur_garnettii
ENSDNOG00000018160	UPF2	100	98.429	ENSOARG00000014587	UPF2	100	98.429	Ovis_aries
ENSDNOG00000018160	UPF2	99	93.823	ENSPPAG00000037953	UPF2	100	94.567	Pan_paniscus
ENSDNOG00000018160	UPF2	100	98.584	ENSPPRG00000000690	UPF2	100	98.584	Panthera_pardus
ENSDNOG00000018160	UPF2	100	98.584	ENSPTIG00000008867	UPF2	100	98.584	Panthera_tigris_altaica
ENSDNOG00000018160	UPF2	100	97.720	ENSPTRG00000002291	UPF2	100	97.720	Pan_troglodytes
ENSDNOG00000018160	UPF2	100	97.799	ENSPANG00000023399	UPF2	100	97.799	Papio_anubis
ENSDNOG00000018160	UPF2	100	80.343	ENSPKIG00000025502	UPF2	100	81.045	Paramormyrops_kingsleyae
ENSDNOG00000018160	UPF2	59	92.563	ENSPSIG00000015158	UPF2	95	92.563	Pelodiscus_sinensis
ENSDNOG00000018160	UPF2	99	80.047	ENSPMGG00000005259	UPF2	100	81.068	Periophthalmus_magnuspinnatus
ENSDNOG00000018160	UPF2	93	96.793	ENSPEMG00000015731	Upf2	99	96.793	Peromyscus_maniculatus_bairdii
ENSDNOG00000018160	UPF2	100	95.830	ENSPCIG00000006656	UPF2	100	95.830	Phascolarctos_cinereus
ENSDNOG00000018160	UPF2	100	80.187	ENSPFOG00000017118	UPF2	100	82.137	Poecilia_formosa
ENSDNOG00000018160	UPF2	100	80.187	ENSPLAG00000005094	UPF2	100	82.137	Poecilia_latipinna
ENSDNOG00000018160	UPF2	100	80.187	ENSPMEG00000017009	UPF2	100	82.137	Poecilia_mexicana
ENSDNOG00000018160	UPF2	99	80.110	ENSPREG00000021880	UPF2	100	82.381	Poecilia_reticulata
ENSDNOG00000018160	UPF2	66	98.923	ENSPPYG00000002089	-	100	98.923	Pongo_abelii
ENSDNOG00000018160	UPF2	100	84.422	ENSPCAG00000000684	UPF2	100	84.422	Procavia_capensis
ENSDNOG00000018160	UPF2	99	94.878	ENSPCOG00000021656	UPF2	100	94.957	Propithecus_coquereli
ENSDNOG00000018160	UPF2	100	90.959	ENSPVAG00000017286	UPF2	100	90.959	Pteropus_vampyrus
ENSDNOG00000018160	UPF2	99	78.594	ENSPNYG00000017096	UPF2	100	80.469	Pundamilia_nyererei
ENSDNOG00000018160	UPF2	100	83.151	ENSPNAG00000009357	UPF2	100	83.619	Pygocentrus_nattereri
ENSDNOG00000018160	UPF2	99	91.444	ENSRNOG00000023593	Upf2	100	98.889	Rattus_norvegicus
ENSDNOG00000018160	UPF2	99	96.769	ENSRBIG00000037780	UPF2	100	96.769	Rhinopithecus_bieti
ENSDNOG00000018160	UPF2	100	97.720	ENSRROG00000043547	UPF2	100	97.720	Rhinopithecus_roxellana
ENSDNOG00000018160	UPF2	100	97.484	ENSSBOG00000020012	UPF2	100	97.484	Saimiri_boliviensis_boliviensis
ENSDNOG00000018160	UPF2	100	81.606	ENSSFOG00015023788	upf2	100	83.164	Scleropages_formosus
ENSDNOG00000018160	UPF2	90	82.914	ENSSMAG00000007637	UPF2	100	79.070	Scophthalmus_maximus
ENSDNOG00000018160	UPF2	100	82.697	ENSSDUG00000017244	UPF2	99	82.995	Seriola_dumerili
ENSDNOG00000018160	UPF2	99	80.986	ENSSLDG00000016866	UPF2	100	81.363	Seriola_lalandi_dorsalis
ENSDNOG00000018160	UPF2	100	95.987	ENSSARG00000008615	UPF2	100	95.987	Sorex_araneus
ENSDNOG00000018160	UPF2	99	90.394	ENSSPUG00000014544	UPF2	99	90.394	Sphenodon_punctatus
ENSDNOG00000018160	UPF2	68	98.389	ENSSSCG00000011117	-	100	98.389	Sus_scrofa
ENSDNOG00000018160	UPF2	99	93.770	ENSTGUG00000002163	-	100	93.770	Taeniopygia_guttata
ENSDNOG00000018160	UPF2	100	82.243	ENSTRUG00000007519	UPF2	99	82.215	Takifugu_rubripes
ENSDNOG00000018160	UPF2	100	80.016	ENSTNIG00000004453	UPF2	100	79.673	Tetraodon_nigroviridis
ENSDNOG00000018160	UPF2	93	90.262	ENSTBEG00000012679	UPF2	93	90.517	Tupaia_belangeri
ENSDNOG00000018160	UPF2	100	98.348	ENSTTRG00000016388	UPF2	100	98.348	Tursiops_truncatus
ENSDNOG00000018160	UPF2	94	98.770	ENSUAMG00000023560	UPF2	100	98.770	Ursus_americanus
ENSDNOG00000018160	UPF2	100	98.741	ENSUMAG00000012953	UPF2	95	98.741	Ursus_maritimus
ENSDNOG00000018160	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSDNOG00000018160	UPF2	100	98.662	ENSVVUG00000006166	UPF2	100	98.662	Vulpes_vulpes
ENSDNOG00000018160	UPF2	100	82.552	ENSXETG00000033103	UPF2	100	81.193	Xenopus_tropicalis
ENSDNOG00000018160	UPF2	92	84.786	ENSXCOG00000011604	UPF2	100	81.797	Xiphophorus_couchianus
ENSDNOG00000018160	UPF2	92	84.983	ENSXMAG00000017209	UPF2	100	81.825	Xiphophorus_maculatus