EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000031077 (Gene tree)
Gene ID: 101439892
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 1164 bases
Position: chrJH569232.1:4862997-4864160
Accession: 31955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000020742	RRM_5	PF13893.6	4.7e-16	1	4
ENSDNOP00000020742	RRM_5	PF13893.6	4.7e-16	2	4
ENSDNOP00000020742	RRM_5	PF13893.6	4.7e-16	3	4
ENSDNOP00000020742	RRM_5	PF13893.6	4.7e-16	4	4
ENSDNOP00000020742	RRM_1	PF00076.22	8.2e-83	1	4
ENSDNOP00000020742	RRM_1	PF00076.22	8.2e-83	2	4
ENSDNOP00000020742	RRM_1	PF00076.22	8.2e-83	3	4
ENSDNOP00000020742	RRM_1	PF00076.22	8.2e-83	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000047321	PABPC4L-201	1164	-	ENSDNOP00000020742	388 (aa)	-	UPI0003CBF188

Gene Model

Click here to download ENSDNOG00000031077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000031077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000031077	PABPC4L	97	73.514	ENSDNOG00000008718	PABPC1	60	73.514
ENSDNOG00000031077	PABPC4L	89	65.476	ENSDNOG00000006598	-	64	65.476
ENSDNOG00000031077	PABPC4L	97	67.218	ENSDNOG00000048450	PABPC1L	62	67.218
ENSDNOG00000031077	PABPC4L	88	30.405	ENSDNOG00000003267	-	54	30.405
ENSDNOG00000031077	PABPC4L	92	30.065	ENSDNOG00000033502	ELAVL4	84	30.065
ENSDNOG00000031077	PABPC4L	95	56.936	ENSDNOG00000030956	-	61	56.936
ENSDNOG00000031077	PABPC4L	97	78.595	ENSDNOG00000018444	-	56	78.595
ENSDNOG00000031077	PABPC4L	93	65.079	ENSDNOG00000030926	-	98	63.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000031077	PABPC4L	95	92.162	ENSG00000254535	PABPC4L	100	92.162	Homo_sapiens
ENSDNOG00000031077	PABPC4L	100	87.629	ENSANAG00000017199	PABPC4L	91	87.629	Aotus_nancymaae
ENSDNOG00000031077	PABPC4L	95	89.973	ENSBTAG00000046902	PABPC4L	99	89.973	Bos_taurus
ENSDNOG00000031077	PABPC4L	100	88.144	ENSCJAG00000045332	PABPC4L	91	88.144	Callithrix_jacchus
ENSDNOG00000031077	PABPC4L	97	73.098	ENSCAFG00020019182	-	54	73.098	Canis_lupus_dingo
ENSDNOG00000031077	PABPC4L	95	89.973	ENSCHIG00000007231	PABPC4L	99	89.973	Capra_hircus
ENSDNOG00000031077	PABPC4L	93	79.104	ENSCAPG00000000555	PABPC4L	100	79.104	Cavia_aperea
ENSDNOG00000031077	PABPC4L	95	76.216	ENSCPOG00000033167	PABPC4L	100	76.216	Cavia_porcellus
ENSDNOG00000031077	PABPC4L	100	88.402	ENSCCAG00000031681	PABPC4L	91	88.402	Cebus_capucinus
ENSDNOG00000031077	PABPC4L	95	82.703	ENSCLAG00000017628	PABPC4L	100	82.703	Chinchilla_lanigera
ENSDNOG00000031077	PABPC4L	95	89.730	ENSCANG00000037677	PABPC4L	100	89.730	Colobus_angolensis_palliatus
ENSDNOG00000031077	PABPC4L	95	80.541	ENSCGRG00001002070	Pabpc4l	100	80.541	Cricetulus_griseus_chok1gshd
ENSDNOG00000031077	PABPC4L	95	80.541	ENSCGRG00000020086	Pabpc4l	100	80.541	Cricetulus_griseus_crigri
ENSDNOG00000031077	PABPC4L	95	89.702	ENSEASG00005007883	PABPC4L	99	89.702	Equus_asinus_asinus
ENSDNOG00000031077	PABPC4L	95	89.973	ENSECAG00000031416	PABPC4L	99	89.973	Equus_caballus
ENSDNOG00000031077	PABPC4L	95	90.244	ENSFCAG00000028270	PABPC4L	99	90.244	Felis_catus
ENSDNOG00000031077	PABPC4L	95	82.114	ENSFDAG00000019606	PABPC4L	99	82.114	Fukomys_damarensis
ENSDNOG00000031077	PABPC4L	95	91.622	ENSGGOG00000024991	PABPC4L	100	91.622	Gorilla_gorilla
ENSDNOG00000031077	PABPC4L	95	82.114	ENSHGLG00000020104	PABPC4L	99	82.114	Heterocephalus_glaber_female
ENSDNOG00000031077	PABPC4L	95	82.114	ENSHGLG00100020648	PABPC4L	99	82.114	Heterocephalus_glaber_male
ENSDNOG00000031077	PABPC4L	96	85.714	ENSSTOG00000019472	PABPC4L	99	85.714	Ictidomys_tridecemlineatus
ENSDNOG00000031077	PABPC4L	95	81.843	ENSJJAG00000004090	Pabpc4l	99	81.843	Jaculus_jaculus
ENSDNOG00000031077	PABPC4L	95	80.541	ENSMAUG00000016313	Pabpc4l	100	80.541	Mesocricetus_auratus
ENSDNOG00000031077	PABPC4L	95	91.892	ENSMICG00000029683	PABPC4L	100	91.892	Microcebus_murinus
ENSDNOG00000031077	PABPC4L	95	82.432	ENSMOCG00000007551	Pabpc4l	100	82.432	Microtus_ochrogaster
ENSDNOG00000031077	PABPC4L	95	79.189	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	79.189	Mus_caroli
ENSDNOG00000031077	PABPC4L	95	79.459	ENSMUSG00000090919	Pabpc4l	100	79.459	Mus_musculus
ENSDNOG00000031077	PABPC4L	95	79.730	MGP_PahariEiJ_G0026409	Pabpc4l	100	79.730	Mus_pahari
ENSDNOG00000031077	PABPC4L	95	78.919	MGP_SPRETEiJ_G0025903	Pabpc4l	100	78.919	Mus_spretus
ENSDNOG00000031077	PABPC4L	95	79.946	ENSMLUG00000008254	PABPC4L	99	79.946	Myotis_lucifugus
ENSDNOG00000031077	PABPC4L	95	86.757	ENSNGAG00000001502	Pabpc4l	100	86.757	Nannospalax_galili
ENSDNOG00000031077	PABPC4L	95	91.892	ENSNLEG00000019300	PABPC4L	100	91.892	Nomascus_leucogenys
ENSDNOG00000031077	PABPC4L	95	86.486	ENSOGAG00000026166	PABPC4L	100	86.486	Otolemur_garnettii
ENSDNOG00000031077	PABPC4L	95	91.950	ENSPPAG00000043745	PABPC4L	93	91.950	Pan_paniscus
ENSDNOG00000031077	PABPC4L	95	89.702	ENSPPRG00000018628	PABPC4L	99	89.702	Panthera_pardus
ENSDNOG00000031077	PABPC4L	95	90.244	ENSPTIG00000010106	PABPC4L	99	90.244	Panthera_tigris_altaica
ENSDNOG00000031077	PABPC4L	99	89.443	ENSPTRG00000045513	-	79	89.443	Pan_troglodytes
ENSDNOG00000031077	PABPC4L	95	81.351	ENSPEMG00000012565	Pabpc4l	100	81.351	Peromyscus_maniculatus_bairdii
ENSDNOG00000031077	PABPC4L	95	92.162	ENSPCOG00000025578	PABPC4L	100	92.162	Propithecus_coquereli
ENSDNOG00000031077	PABPC4L	95	80.000	ENSRNOG00000029749	Pabpc4l	100	80.000	Rattus_norvegicus
ENSDNOG00000031077	PABPC4L	95	88.919	ENSRBIG00000030229	PABPC4L	100	88.919	Rhinopithecus_bieti
ENSDNOG00000031077	PABPC4L	95	88.649	ENSRROG00000020367	PABPC4L	100	88.649	Rhinopithecus_roxellana
ENSDNOG00000031077	PABPC4L	95	88.919	ENSSBOG00000016382	PABPC4L	100	88.919	Saimiri_boliviensis_boliviensis
ENSDNOG00000031077	PABPC4L	95	84.553	ENSSSCG00000009067	PABPC4L	99	84.553	Sus_scrofa
ENSDNOG00000031077	PABPC4L	95	89.431	ENSUAMG00000001289	PABPC4L	99	89.431	Ursus_americanus
ENSDNOG00000031077	PABPC4L	95	89.431	ENSUMAG00000014887	PABPC4L	99	89.431	Ursus_maritimus
ENSDNOG00000031077	PABPC4L	85	75.301	ENSVVUG00000011060	-	76	75.301	Vulpes_vulpes