EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000032004 (Gene tree)
Gene ID: 101423224
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 15934 bases
Position: chrJH569958.1:294427-310360
Accession: 15818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000030879	RRM_1	PF00076.22	3.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000033738	RBM38-201	2471	-	ENSDNOP00000030879	209 (aa)	-	UPI0003CC1C57

Gene Model

Click here to download ENSDNOG00000032004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000032004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000032004	RBM38	69	32.335	ENSDNOG00000005713	MSI1	50	32.370

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000032004	RBM38	100	89.815	ENSG00000132819	RBM38	94	94.828	Homo_sapiens
ENSDNOG00000032004	RBM38	100	57.384	ENSAPOG00000003301	rbm38	93	57.384	Acanthochromis_polyacanthus
ENSDNOG00000032004	RBM38	100	69.484	ENSAPOG00000009939	-	94	71.028	Acanthochromis_polyacanthus
ENSDNOG00000032004	RBM38	98	68.372	ENSACIG00000012502	-	100	87.179	Amphilophus_citrinellus
ENSDNOG00000032004	RBM38	100	55.932	ENSACIG00000000010	rbm38	93	55.932	Amphilophus_citrinellus
ENSDNOG00000032004	RBM38	99	69.811	ENSAOCG00000012559	RBM38	90	70.892	Amphiprion_ocellaris
ENSDNOG00000032004	RBM38	100	57.384	ENSAOCG00000013497	-	93	57.384	Amphiprion_ocellaris
ENSDNOG00000032004	RBM38	98	62.381	ENSAPEG00000013137	rbm38	93	57.384	Amphiprion_percula
ENSDNOG00000032004	RBM38	100	63.248	ENSAPEG00000023581	-	95	65.106	Amphiprion_percula
ENSDNOG00000032004	RBM38	100	59.910	ENSATEG00000016366	rbm38	94	59.910	Anabas_testudineus
ENSDNOG00000032004	RBM38	98	65.351	ENSATEG00000016710	-	92	67.249	Anabas_testudineus
ENSDNOG00000032004	RBM38	100	76.498	ENSACAG00000016238	RBM38	90	76.498	Anolis_carolinensis
ENSDNOG00000032004	RBM38	100	89.352	ENSANAG00000031959	RBM38	100	89.352	Aotus_nancymaae
ENSDNOG00000032004	RBM38	98	65.789	ENSACLG00000019514	-	92	66.376	Astatotilapia_calliptera
ENSDNOG00000032004	RBM38	100	67.841	ENSAMXG00000015601	-	94	69.163	Astyanax_mexicanus
ENSDNOG00000032004	RBM38	88	64.481	ENSAMXG00000038120	rbm38	76	65.027	Astyanax_mexicanus
ENSDNOG00000032004	RBM38	100	87.500	ENSBTAG00000008105	RBM38	90	87.500	Bos_taurus
ENSDNOG00000032004	RBM38	100	90.278	ENSCJAG00000019139	RBM38	90	90.278	Callithrix_jacchus
ENSDNOG00000032004	RBM38	100	90.278	ENSCAFG00020021943	RBM38	90	90.278	Canis_lupus_dingo
ENSDNOG00000032004	RBM38	100	87.500	ENSCHIG00000002609	RBM38	90	87.500	Capra_hircus
ENSDNOG00000032004	RBM38	100	88.889	ENSCPOG00000012781	RBM38	90	88.889	Cavia_porcellus
ENSDNOG00000032004	RBM38	100	90.278	ENSCCAG00000036872	RBM38	90	90.278	Cebus_capucinus
ENSDNOG00000032004	RBM38	100	90.654	ENSCATG00000032133	RBM38	90	90.654	Cercocebus_atys
ENSDNOG00000032004	RBM38	100	87.037	ENSCLAG00000005906	RBM38	94	87.037	Chinchilla_lanigera
ENSDNOG00000032004	RBM38	100	90.654	ENSCSAG00000015503	RBM38	90	90.654	Chlorocebus_sabaeus
ENSDNOG00000032004	RBM38	100	80.556	ENSCPBG00000024059	RBM38	100	80.556	Chrysemys_picta_bellii
ENSDNOG00000032004	RBM38	51	79.245	ENSCING00000025102	-	68	62.025	Ciona_intestinalis
ENSDNOG00000032004	RBM38	78	59.756	ENSCSAVG00000001132	-	50	59.756	Ciona_savignyi
ENSDNOG00000032004	RBM38	100	69.159	ENSCANG00000030105	-	79	69.159	Colobus_angolensis_palliatus
ENSDNOG00000032004	RBM38	100	84.259	ENSCGRG00001012928	Rbm38	91	85.648	Cricetulus_griseus_chok1gshd
ENSDNOG00000032004	RBM38	71	66.000	ENSCSEG00000020943	rbm38	60	59.783	Cynoglossus_semilaevis
ENSDNOG00000032004	RBM38	98	69.953	ENSCSEG00000004701	-	93	71.028	Cynoglossus_semilaevis
ENSDNOG00000032004	RBM38	98	56.522	ENSCVAG00000015952	rbm38	91	56.710	Cyprinodon_variegatus
ENSDNOG00000032004	RBM38	98	65.939	ENSCVAG00000005472	-	92	66.522	Cyprinodon_variegatus
ENSDNOG00000032004	RBM38	98	62.896	ENSDARG00000058818	rbm38	92	62.896	Danio_rerio
ENSDNOG00000032004	RBM38	66	67.883	ENSEBUG00000015164	rbm38	83	67.883	Eptatretus_burgeri
ENSDNOG00000032004	RBM38	100	88.426	ENSECAG00000007700	RBM38	90	88.426	Equus_caballus
ENSDNOG00000032004	RBM38	100	85.714	ENSEEUG00000013489	RBM38	91	87.097	Erinaceus_europaeus
ENSDNOG00000032004	RBM38	100	67.094	ENSELUG00000005849	-	95	67.094	Esox_lucius
ENSDNOG00000032004	RBM38	87	67.391	ENSELUG00000000585	-	80	67.391	Esox_lucius
ENSDNOG00000032004	RBM38	100	89.352	ENSFCAG00000042916	RBM38	90	89.815	Felis_catus
ENSDNOG00000032004	RBM38	83	84.393	ENSFALG00000010805	RBM38	90	84.393	Ficedula_albicollis
ENSDNOG00000032004	RBM38	98	72.857	ENSFHEG00000006160	-	92	72.857	Fundulus_heteroclitus
ENSDNOG00000032004	RBM38	98	56.277	ENSFHEG00000017748	rbm38	91	56.277	Fundulus_heteroclitus
ENSDNOG00000032004	RBM38	85	70.391	ENSGMOG00000016655	-	96	74.444	Gadus_morhua
ENSDNOG00000032004	RBM38	100	80.093	ENSGALG00000026081	RBM38	100	79.630	Gallus_gallus
ENSDNOG00000032004	RBM38	98	63.592	ENSGACG00000015224	rbm38	98	63.592	Gasterosteus_aculeatus
ENSDNOG00000032004	RBM38	99	67.727	ENSGACG00000009873	-	100	67.873	Gasterosteus_aculeatus
ENSDNOG00000032004	RBM38	100	81.019	ENSGAGG00000001187	RBM38	100	81.019	Gopherus_agassizii
ENSDNOG00000032004	RBM38	100	59.276	ENSHBUG00000012058	rbm38	92	59.276	Haplochromis_burtoni
ENSDNOG00000032004	RBM38	98	69.302	ENSHBUG00000011778	-	92	70.370	Haplochromis_burtoni
ENSDNOG00000032004	RBM38	100	83.333	ENSHGLG00000015077	RBM38	90	86.574	Heterocephalus_glaber_female
ENSDNOG00000032004	RBM38	91	72.917	ENSHCOG00000005622	-	54	73.958	Hippocampus_comes
ENSDNOG00000032004	RBM38	72	67.550	ENSHCOG00000019040	rbm38	65	67.550	Hippocampus_comes
ENSDNOG00000032004	RBM38	100	65.066	ENSIPUG00000019349	-	94	65.066	Ictalurus_punctatus
ENSDNOG00000032004	RBM38	98	52.991	ENSKMAG00000012402	rbm38	99	53.191	Kryptolebias_marmoratus
ENSDNOG00000032004	RBM38	98	68.837	ENSLBEG00000016163	RBM38	92	69.907	Labrus_bergylta
ENSDNOG00000032004	RBM38	98	56.710	ENSLBEG00000018878	rbm38	91	56.710	Labrus_bergylta
ENSDNOG00000032004	RBM38	100	72.973	ENSLOCG00000003456	rbm38	94	72.973	Lepisosteus_oculatus
ENSDNOG00000032004	RBM38	100	90.654	ENSMFAG00000043808	RBM38	90	90.654	Macaca_fascicularis
ENSDNOG00000032004	RBM38	100	90.654	ENSMMUG00000031391	RBM38	90	90.654	Macaca_mulatta
ENSDNOG00000032004	RBM38	100	90.654	ENSMNEG00000034683	RBM38	90	90.654	Macaca_nemestrina
ENSDNOG00000032004	RBM38	52	78.899	ENSMLEG00000043261	-	88	78.899	Mandrillus_leucophaeus
ENSDNOG00000032004	RBM38	100	58.475	ENSMAMG00000024135	rbm38	93	58.475	Mastacembelus_armatus
ENSDNOG00000032004	RBM38	100	64.378	ENSMAMG00000020499	RBM38	95	65.812	Mastacembelus_armatus
ENSDNOG00000032004	RBM38	98	69.302	ENSMZEG00005000849	-	92	70.370	Maylandia_zebra
ENSDNOG00000032004	RBM38	100	56.780	ENSMZEG00005026036	rbm38	93	56.780	Maylandia_zebra
ENSDNOG00000032004	RBM38	100	84.722	ENSMAUG00000021211	Rbm38	91	86.111	Mesocricetus_auratus
ENSDNOG00000032004	RBM38	100	89.352	ENSMICG00000038011	RBM38	100	89.352	Microcebus_murinus
ENSDNOG00000032004	RBM38	100	85.185	ENSMOCG00000008715	Rbm38	91	86.574	Microtus_ochrogaster
ENSDNOG00000032004	RBM38	98	71.014	ENSMMOG00000020051	-	90	71.635	Mola_mola
ENSDNOG00000032004	RBM38	100	81.019	ENSMODG00000016458	RBM38	92	81.019	Monodelphis_domestica
ENSDNOG00000032004	RBM38	85	76.111	ENSMALG00000004680	RBM38	67	76.111	Monopterus_albus
ENSDNOG00000032004	RBM38	73	66.667	ENSMALG00000022327	rbm38	67	67.097	Monopterus_albus
ENSDNOG00000032004	RBM38	100	84.722	MGP_CAROLIEiJ_G0024745	Rbm38	91	87.963	Mus_caroli
ENSDNOG00000032004	RBM38	100	85.185	ENSMUSG00000027510	Rbm38	91	88.426	Mus_musculus
ENSDNOG00000032004	RBM38	100	84.722	MGP_PahariEiJ_G0026186	Rbm38	91	87.963	Mus_pahari
ENSDNOG00000032004	RBM38	100	84.722	MGP_SPRETEiJ_G0025665	Rbm38	91	87.963	Mus_spretus
ENSDNOG00000032004	RBM38	93	87.624	ENSMPUG00000006518	RBM38	100	87.624	Mustela_putorius_furo
ENSDNOG00000032004	RBM38	100	85.185	ENSMLUG00000011140	RBM38	100	85.185	Myotis_lucifugus
ENSDNOG00000032004	RBM38	100	60.360	ENSNBRG00000022685	rbm38	91	60.360	Neolamprologus_brichardi
ENSDNOG00000032004	RBM38	98	65.789	ENSNBRG00000022545	-	92	66.376	Neolamprologus_brichardi
ENSDNOG00000032004	RBM38	55	83.478	ENSMEUG00000005475	-	86	83.478	Notamacropus_eugenii
ENSDNOG00000032004	RBM38	100	87.963	ENSODEG00000007980	RBM38	90	87.963	Octodon_degus
ENSDNOG00000032004	RBM38	99	57.021	ENSONIG00000017073	rbm38	95	57.021	Oreochromis_niloticus
ENSDNOG00000032004	RBM38	98	65.639	ENSONIG00000020324	-	92	66.228	Oreochromis_niloticus
ENSDNOG00000032004	RBM38	100	78.873	ENSOANG00000009259	RBM38	83	79.812	Ornithorhynchus_anatinus
ENSDNOG00000032004	RBM38	98	61.739	ENSORLG00000027180	-	92	64.935	Oryzias_latipes
ENSDNOG00000032004	RBM38	85	61.202	ENSORLG00000012154	rbm38	76	59.585	Oryzias_latipes
ENSDNOG00000032004	RBM38	98	61.739	ENSORLG00020020751	-	92	64.935	Oryzias_latipes_hni
ENSDNOG00000032004	RBM38	89	60.622	ENSORLG00020017871	rbm38	76	60.622	Oryzias_latipes_hni
ENSDNOG00000032004	RBM38	99	57.143	ENSORLG00015012606	rbm38	90	57.143	Oryzias_latipes_hsok
ENSDNOG00000032004	RBM38	98	62.009	ENSORLG00015017040	-	92	65.217	Oryzias_latipes_hsok
ENSDNOG00000032004	RBM38	98	62.719	ENSOMEG00000023912	-	92	65.217	Oryzias_melastigma
ENSDNOG00000032004	RBM38	89	60.622	ENSOMEG00000006805	rbm38	76	60.622	Oryzias_melastigma
ENSDNOG00000032004	RBM38	100	89.352	ENSOGAG00000029136	RBM38	90	89.352	Otolemur_garnettii
ENSDNOG00000032004	RBM38	100	89.352	ENSPPRG00000009507	RBM38	90	89.815	Panthera_pardus
ENSDNOG00000032004	RBM38	94	89.655	ENSPTRG00000013661	RBM38	98	89.655	Pan_troglodytes
ENSDNOG00000032004	RBM38	61	92.188	ENSPTRG00000045845	-	70	92.188	Pan_troglodytes
ENSDNOG00000032004	RBM38	100	90.654	ENSPANG00000020919	-	90	90.654	Papio_anubis
ENSDNOG00000032004	RBM38	98	73.333	ENSPANG00000033127	-	92	72.170	Papio_anubis
ENSDNOG00000032004	RBM38	98	69.953	ENSPKIG00000018122	-	100	88.034	Paramormyrops_kingsleyae
ENSDNOG00000032004	RBM38	98	65.333	ENSPKIG00000025417	rbm38	92	65.333	Paramormyrops_kingsleyae
ENSDNOG00000032004	RBM38	100	79.630	ENSPSIG00000011649	RBM38	92	79.630	Pelodiscus_sinensis
ENSDNOG00000032004	RBM38	98	61.739	ENSPMGG00000017094	-	82	67.476	Periophthalmus_magnuspinnatus
ENSDNOG00000032004	RBM38	100	53.814	ENSPMGG00000011343	rbm38	94	55.085	Periophthalmus_magnuspinnatus
ENSDNOG00000032004	RBM38	100	81.019	ENSPCIG00000013648	RBM38	92	81.019	Phascolarctos_cinereus
ENSDNOG00000032004	RBM38	98	55.172	ENSPFOG00000011658	rbm38	91	56.466	Poecilia_formosa
ENSDNOG00000032004	RBM38	98	54.741	ENSPLAG00000005218	rbm38	91	56.466	Poecilia_latipinna
ENSDNOG00000032004	RBM38	98	66.094	ENSPLAG00000002500	-	92	66.094	Poecilia_latipinna
ENSDNOG00000032004	RBM38	98	55.172	ENSPMEG00000015770	rbm38	91	56.466	Poecilia_mexicana
ENSDNOG00000032004	RBM38	98	55.603	ENSPREG00000007398	rbm38	91	56.897	Poecilia_reticulata
ENSDNOG00000032004	RBM38	100	88.426	ENSPCOG00000026201	RBM38	90	88.426	Propithecus_coquereli
ENSDNOG00000032004	RBM38	100	60.648	ENSPVAG00000006457	RBM38	91	61.574	Pteropus_vampyrus
ENSDNOG00000032004	RBM38	98	69.767	ENSPNYG00000019727	-	100	88.034	Pundamilia_nyererei
ENSDNOG00000032004	RBM38	98	59.813	ENSPNYG00000021373	rbm38	92	59.361	Pundamilia_nyererei
ENSDNOG00000032004	RBM38	100	67.401	ENSPNAG00000015123	-	96	75.758	Pygocentrus_nattereri
ENSDNOG00000032004	RBM38	88	71.739	ENSPNAG00000010596	rbm38	76	71.739	Pygocentrus_nattereri
ENSDNOG00000032004	RBM38	100	87.037	ENSRNOG00000006420	Rbm38	91	87.037	Rattus_norvegicus
ENSDNOG00000032004	RBM38	100	73.832	ENSRROG00000036388	-	89	73.832	Rhinopithecus_roxellana
ENSDNOG00000032004	RBM38	100	89.352	ENSSBOG00000031053	RBM38	100	89.352	Saimiri_boliviensis_boliviensis
ENSDNOG00000032004	RBM38	98	65.138	ENSSFOG00015004453	rbm38	92	68.349	Scleropages_formosus
ENSDNOG00000032004	RBM38	100	58.051	ENSSDUG00000022611	rbm38	93	58.051	Seriola_dumerili
ENSDNOG00000032004	RBM38	98	65.502	ENSSDUG00000021082	RBM38	92	66.087	Seriola_dumerili
ENSDNOG00000032004	RBM38	98	62.559	ENSSLDG00000010845	rbm38	90	62.559	Seriola_lalandi_dorsalis
ENSDNOG00000032004	RBM38	98	65.502	ENSSLDG00000011778	RBM38	92	66.087	Seriola_lalandi_dorsalis
ENSDNOG00000032004	RBM38	98	70.874	ENSSPAG00000020989	RBM38	91	71.498	Stegastes_partitus
ENSDNOG00000032004	RBM38	100	57.203	ENSSPAG00000011113	rbm38	93	57.203	Stegastes_partitus
ENSDNOG00000032004	RBM38	100	89.815	ENSSSCG00000007504	RBM38	90	89.815	Sus_scrofa
ENSDNOG00000032004	RBM38	98	63.755	ENSTRUG00000019869	-	92	64.783	Takifugu_rubripes
ENSDNOG00000032004	RBM38	85	63.934	ENSTRUG00000024954	rbm38	77	62.371	Takifugu_rubripes
ENSDNOG00000032004	RBM38	98	66.514	ENSTNIG00000007093	-	97	67.580	Tetraodon_nigroviridis
ENSDNOG00000032004	RBM38	100	89.352	ENSUAMG00000019780	RBM38	90	89.815	Ursus_americanus
ENSDNOG00000032004	RBM38	100	90.278	ENSVVUG00000017246	RBM38	90	90.278	Vulpes_vulpes
ENSDNOG00000032004	RBM38	100	74.545	ENSXETG00000011268	rbm38	99	75.000	Xenopus_tropicalis
ENSDNOG00000032004	RBM38	61	77.444	ENSXCOG00000017324	-	60	77.444	Xiphophorus_couchianus
ENSDNOG00000032004	RBM38	98	56.277	ENSXMAG00000023662	rbm38	91	56.710	Xiphophorus_maculatus