EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000032478 (Gene tree)
Gene ID: 101438461
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 22831 bases
Position: chrJH579999.1:224840-247670
Accession: 101438461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000033262	zf-C2H2	PF00096.26	3.9e-19	1	2
ENSDNOP00000033262	zf-C2H2	PF00096.26	3.9e-19	2	2
ENSDNOP00000028273	zf-C2H2	PF00096.26	8.4e-15	1	2
ENSDNOP00000028273	zf-C2H2	PF00096.26	8.4e-15	2	2
ENSDNOP00000028273	zf-met	PF12874.7	9.5e-06	1	1
ENSDNOP00000033262	zf-met	PF12874.7	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000041408	PRDM4-201	6415	-	ENSDNOP00000028273	695 (aa)	-	UPI0003CC1781
ENSDNOT00000052310	PRDM4-202	4784	-	ENSDNOP00000033262	798 (aa)	XP_004480865	UPI000328CED7

Gene Model

Click here to download ENSDNOG00000032478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000032478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000032478	PRDM4	100	96.504	ENSG00000110851	PRDM4	100	96.504	Homo_sapiens
ENSDNOG00000032478	PRDM4	99	96.695	ENSAMEG00000016174	PRDM4	99	96.370	Ailuropoda_melanoleuca
ENSDNOG00000032478	PRDM4	99	87.194	ENSAPLG00000009846	PRDM4	99	86.216	Anas_platyrhynchos
ENSDNOG00000032478	PRDM4	100	96.418	ENSANAG00000024800	PRDM4	100	96.380	Aotus_nancymaae
ENSDNOG00000032478	PRDM4	100	96.275	ENSBTAG00000012999	PRDM4	100	96.255	Bos_taurus
ENSDNOG00000032478	PRDM4	100	100.000	ENSCJAG00000015261	PRDM4	100	96.255	Callithrix_jacchus
ENSDNOG00000032478	PRDM4	100	96.418	ENSCAFG00000001788	PRDM4	100	96.380	Canis_familiaris
ENSDNOG00000032478	PRDM4	100	96.418	ENSCAFG00020004916	PRDM4	100	96.380	Canis_lupus_dingo
ENSDNOG00000032478	PRDM4	100	96.132	ENSCHIG00000019409	PRDM4	100	95.880	Capra_hircus
ENSDNOG00000032478	PRDM4	100	96.380	ENSTSYG00000009248	PRDM4	100	96.380	Carlito_syrichta
ENSDNOG00000032478	PRDM4	99	91.354	ENSCAPG00000013937	PRDM4	99	89.487	Cavia_aperea
ENSDNOG00000032478	PRDM4	99	90.714	ENSCPOG00000022385	PRDM4	100	88.944	Cavia_porcellus
ENSDNOG00000032478	PRDM4	100	96.562	ENSCCAG00000036033	PRDM4	100	96.504	Cebus_capucinus
ENSDNOG00000032478	PRDM4	100	96.418	ENSCATG00000044797	PRDM4	100	96.380	Cercocebus_atys
ENSDNOG00000032478	PRDM4	99	92.154	ENSCLAG00000007545	PRDM4	100	91.667	Chinchilla_lanigera
ENSDNOG00000032478	PRDM4	100	96.380	ENSCSAG00000002896	PRDM4	100	96.380	Chlorocebus_sabaeus
ENSDNOG00000032478	PRDM4	77	96.364	ENSCHOG00000001744	PRDM4	86	96.364	Choloepus_hoffmanni
ENSDNOG00000032478	PRDM4	99	88.184	ENSCPBG00000023187	PRDM4	100	86.951	Chrysemys_picta_bellii
ENSDNOG00000032478	PRDM4	100	96.255	ENSCANG00000021804	PRDM4	100	96.255	Colobus_angolensis_palliatus
ENSDNOG00000032478	PRDM4	99	93.723	ENSCGRG00001015102	-	100	92.289	Cricetulus_griseus_chok1gshd
ENSDNOG00000032478	PRDM4	95	94.048	ENSCGRG00000004044	-	100	92.516	Cricetulus_griseus_crigri
ENSDNOG00000032478	PRDM4	99	80.678	ENSDORG00000015081	-	100	80.803	Dipodomys_ordii
ENSDNOG00000032478	PRDM4	99	45.787	ENSEBUG00000003775	prdm4	99	45.631	Eptatretus_burgeri
ENSDNOG00000032478	PRDM4	100	97.278	ENSECAG00000015423	PRDM4	100	96.717	Equus_caballus
ENSDNOG00000032478	PRDM4	94	92.676	ENSEEUG00000006569	PRDM4	99	92.277	Erinaceus_europaeus
ENSDNOG00000032478	PRDM4	99	60.028	ENSELUG00000015265	prdm4	99	60.267	Esox_lucius
ENSDNOG00000032478	PRDM4	100	96.879	ENSFCAG00000022478	PRDM4	100	96.879	Felis_catus
ENSDNOG00000032478	PRDM4	99	87.752	ENSFALG00000013342	PRDM4	100	86.700	Ficedula_albicollis
ENSDNOG00000032478	PRDM4	100	87.143	ENSGALG00000012619	PRDM4	100	86.052	Gallus_gallus
ENSDNOG00000032478	PRDM4	99	87.626	ENSGAGG00000002763	PRDM4	95	86.466	Gopherus_agassizii
ENSDNOG00000032478	PRDM4	99	96.375	ENSGGOG00000001244	PRDM4	99	96.375	Gorilla_gorilla
ENSDNOG00000032478	PRDM4	99	95.101	ENSHGLG00000004590	PRDM4	98	92.848	Heterocephalus_glaber_female
ENSDNOG00000032478	PRDM4	99	93.875	ENSHGLG00100007464	PRDM4	100	91.801	Heterocephalus_glaber_male
ENSDNOG00000032478	PRDM4	99	60.255	ENSIPUG00000024162	prdm4	93	61.569	Ictalurus_punctatus
ENSDNOG00000032478	PRDM4	100	95.989	ENSSTOG00000016168	PRDM4	100	95.506	Ictidomys_tridecemlineatus
ENSDNOG00000032478	PRDM4	99	98.148	ENSJJAG00000022448	-	95	91.935	Jaculus_jaculus
ENSDNOG00000032478	PRDM4	99	73.601	ENSLACG00000007452	PRDM4	99	73.416	Latimeria_chalumnae
ENSDNOG00000032478	PRDM4	82	48.529	ENSLOCG00000017092	prdm4	100	53.247	Lepisosteus_oculatus
ENSDNOG00000032478	PRDM4	99	96.291	ENSLAFG00000001483	PRDM4	100	96.193	Loxodonta_africana
ENSDNOG00000032478	PRDM4	100	96.504	ENSMFAG00000041862	PRDM4	100	96.504	Macaca_fascicularis
ENSDNOG00000032478	PRDM4	100	96.504	ENSMMUG00000015550	PRDM4	100	96.504	Macaca_mulatta
ENSDNOG00000032478	PRDM4	100	96.255	ENSMNEG00000032319	PRDM4	100	96.255	Macaca_nemestrina
ENSDNOG00000032478	PRDM4	100	96.380	ENSMLEG00000039607	PRDM4	100	96.380	Mandrillus_leucophaeus
ENSDNOG00000032478	PRDM4	99	78.875	ENSMGAG00000012815	PRDM4	100	78.500	Meleagris_gallopavo
ENSDNOG00000032478	PRDM4	100	95.272	ENSMICG00000007807	PRDM4	100	95.256	Microcebus_murinus
ENSDNOG00000032478	PRDM4	99	94.676	ENSMOCG00000000753	Prdm4	99	93.358	Microtus_ochrogaster
ENSDNOG00000032478	PRDM4	99	94.524	ENSMUSG00000035529	Prdm4	100	93.601	Mus_musculus
ENSDNOG00000032478	PRDM4	99	94.236	MGP_PahariEiJ_G0031398	Prdm4	100	93.647	Mus_pahari
ENSDNOG00000032478	PRDM4	99	94.813	MGP_SPRETEiJ_G0016505	Prdm4	100	94.536	Mus_spretus
ENSDNOG00000032478	PRDM4	99	90.274	ENSMPUG00000012238	PRDM4	99	89.526	Mustela_putorius_furo
ENSDNOG00000032478	PRDM4	99	96.403	ENSMLUG00000000767	PRDM4	99	95.990	Myotis_lucifugus
ENSDNOG00000032478	PRDM4	99	95.677	ENSNGAG00000018627	Prdm4	100	94.856	Nannospalax_galili
ENSDNOG00000032478	PRDM4	100	96.629	ENSNLEG00000006748	PRDM4	100	96.629	Nomascus_leucogenys
ENSDNOG00000032478	PRDM4	87	93.168	ENSMEUG00000004495	PRDM4	89	89.437	Notamacropus_eugenii
ENSDNOG00000032478	PRDM4	86	97.425	ENSOPRG00000010192	PRDM4	89	95.238	Ochotona_princeps
ENSDNOG00000032478	PRDM4	99	90.387	ENSODEG00000014750	PRDM4	99	89.500	Octodon_degus
ENSDNOG00000032478	PRDM4	100	91.261	ENSOANG00000005526	PRDM4	100	90.137	Ornithorhynchus_anatinus
ENSDNOG00000032478	PRDM4	99	96.110	ENSOCUG00000012859	PRDM4	96	96.110	Oryctolagus_cuniculus
ENSDNOG00000032478	PRDM4	99	96.542	ENSOGAG00000011945	PRDM4	100	96.487	Otolemur_garnettii
ENSDNOG00000032478	PRDM4	100	95.989	ENSOARG00000017955	PRDM4	100	95.880	Ovis_aries
ENSDNOG00000032478	PRDM4	100	96.754	ENSPPAG00000038438	PRDM4	100	96.754	Pan_paniscus
ENSDNOG00000032478	PRDM4	100	96.879	ENSPPRG00000004144	PRDM4	100	96.879	Panthera_pardus
ENSDNOG00000032478	PRDM4	100	96.879	ENSPTIG00000005847	PRDM4	100	96.879	Panthera_tigris_altaica
ENSDNOG00000032478	PRDM4	100	96.562	ENSPTRG00000005400	PRDM4	100	96.504	Pan_troglodytes
ENSDNOG00000032478	PRDM4	100	96.504	ENSPANG00000022084	PRDM4	100	96.504	Papio_anubis
ENSDNOG00000032478	PRDM4	99	60.219	ENSPKIG00000000875	prdm4	99	60.095	Paramormyrops_kingsleyae
ENSDNOG00000032478	PRDM4	89	85.405	ENSPSIG00000012066	PRDM4	100	85.405	Pelodiscus_sinensis
ENSDNOG00000032478	PRDM4	99	95.245	ENSPEMG00000014598	Prdm4	100	94.605	Peromyscus_maniculatus_bairdii
ENSDNOG00000032478	PRDM4	100	89.843	ENSPCIG00000009471	PRDM4	100	88.184	Phascolarctos_cinereus
ENSDNOG00000032478	PRDM4	100	96.380	ENSPPYG00000004913	PRDM4	100	96.380	Pongo_abelii
ENSDNOG00000032478	PRDM4	83	96.423	ENSPCAG00000009987	PRDM4	83	96.423	Procavia_capensis
ENSDNOG00000032478	PRDM4	100	95.256	ENSPCOG00000021060	PRDM4	100	95.256	Propithecus_coquereli
ENSDNOG00000032478	PRDM4	100	95.702	ENSPVAG00000001596	PRDM4	100	95.511	Pteropus_vampyrus
ENSDNOG00000032478	PRDM4	99	94.957	ENSRNOG00000004962	Prdm4	100	93.233	Rattus_norvegicus
ENSDNOG00000032478	PRDM4	100	96.255	ENSRBIG00000035488	PRDM4	100	96.255	Rhinopithecus_bieti
ENSDNOG00000032478	PRDM4	100	96.380	ENSRROG00000012779	PRDM4	100	96.380	Rhinopithecus_roxellana
ENSDNOG00000032478	PRDM4	100	100.000	ENSSBOG00000000403	PRDM4	100	96.629	Saimiri_boliviensis_boliviensis
ENSDNOG00000032478	PRDM4	99	63.675	ENSSFOG00015023358	prdm4	99	63.715	Scleropages_formosus
ENSDNOG00000032478	PRDM4	100	96.418	ENSSSCG00000000160	PRDM4	100	96.130	Sus_scrofa
ENSDNOG00000032478	PRDM4	99	87.770	ENSTGUG00000010962	-	99	86.717	Taeniopygia_guttata
ENSDNOG00000032478	PRDM4	84	89.078	ENSTBEG00000001732	PRDM4	84	89.078	Tupaia_belangeri
ENSDNOG00000032478	PRDM4	100	96.848	ENSTTRG00000011056	PRDM4	100	95.755	Tursiops_truncatus
ENSDNOG00000032478	PRDM4	100	96.879	ENSUAMG00000022796	PRDM4	100	96.879	Ursus_americanus
ENSDNOG00000032478	PRDM4	100	96.879	ENSUMAG00000017231	PRDM4	100	96.879	Ursus_maritimus
ENSDNOG00000032478	PRDM4	99	96.830	ENSVPAG00000002215	PRDM4	100	96.612	Vicugna_pacos
ENSDNOG00000032478	PRDM4	100	96.418	ENSVVUG00000023397	PRDM4	100	96.380	Vulpes_vulpes