EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000036372 (Gene tree)
Gene ID: 101412480
Gene Symbol: PCBP1
Alias: HNRPE1|HNRPX|hnRNP-E1|hnRNP-X
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 858 bases
Position: chrJH568282.1:53452-54309
Accession: 8647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000034664	KH_1	PF00013.29	3.5e-36	1	2
ENSDNOP00000034664	KH_1	PF00013.29	3.5e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000042721	PCBP1-201	858	-	ENSDNOP00000034664	286 (aa)	-	UPI0003CC13A0

Gene Model

Click here to download ENSDNOG00000036372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000036372's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000036372	PCBP1	97	76.703	ENSDNOG00000035361	-	70	76.703
ENSDNOG00000036372	PCBP1	76	42.857	ENSDNOG00000000026	HNRNPK	66	30.128
ENSDNOG00000036372	PCBP1	97	36.879	ENSDNOG00000044136	-	73	36.879
ENSDNOG00000036372	PCBP1	95	32.014	ENSDNOG00000033951	PCBP4	64	32.180
ENSDNOG00000036372	PCBP1	98	51.943	ENSDNOG00000045706	-	75	51.943
ENSDNOG00000036372	PCBP1	83	45.992	ENSDNOG00000044742	-	70	45.992
ENSDNOG00000036372	PCBP1	85	36.364	ENSDNOG00000037853	-	61	36.364
ENSDNOG00000036372	PCBP1	99	61.224	ENSDNOG00000049518	PCBP3	73	61.224
ENSDNOG00000036372	PCBP1	67	48.500	ENSDNOG00000034227	-	72	49.000
ENSDNOG00000036372	PCBP1	99	72.125	ENSDNOG00000032621	-	78	72.125
ENSDNOG00000036372	PCBP1	96	50.725	ENSDNOG00000047920	-	76	50.725
ENSDNOG00000036372	PCBP1	99	66.202	ENSDNOG00000048307	-	78	66.202

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000036372	PCBP1	99	99.298	ENSG00000169564	PCBP1	80	99.298	Homo_sapiens
ENSDNOG00000036372	PCBP1	99	95.789	ENSAMEG00000016094	PCBP1	79	95.789	Ailuropoda_melanoleuca
ENSDNOG00000036372	PCBP1	99	82.807	ENSANAG00000033377	-	78	82.807	Aotus_nancymaae
ENSDNOG00000036372	PCBP1	99	94.346	ENSANAG00000019364	-	100	94.346	Aotus_nancymaae
ENSDNOG00000036372	PCBP1	97	97.826	ENSANAG00000023938	-	82	97.826	Aotus_nancymaae
ENSDNOG00000036372	PCBP1	99	85.263	ENSANAG00000026077	-	79	85.263	Aotus_nancymaae
ENSDNOG00000036372	PCBP1	99	94.346	ENSANAG00000031745	-	100	94.346	Aotus_nancymaae
ENSDNOG00000036372	PCBP1	99	91.166	ENSANAG00000022494	-	100	91.166	Aotus_nancymaae
ENSDNOG00000036372	PCBP1	96	95.636	ENSANAG00000026989	-	78	95.636	Aotus_nancymaae
ENSDNOG00000036372	PCBP1	99	87.368	ENSANAG00000027108	-	90	87.368	Aotus_nancymaae
ENSDNOG00000036372	PCBP1	88	99.605	ENSBTAG00000008985	PCBP1	77	99.605	Bos_taurus
ENSDNOG00000036372	PCBP1	99	93.333	ENSCJAG00000038388	-	76	93.333	Callithrix_jacchus
ENSDNOG00000036372	PCBP1	99	98.947	ENSCAFG00000003326	PCBP1	80	98.947	Canis_familiaris
ENSDNOG00000036372	PCBP1	99	99.298	ENSCHIG00000007923	PCBP1	80	99.298	Capra_hircus
ENSDNOG00000036372	PCBP1	99	98.596	ENSTSYG00000027848	PCBP1	80	98.596	Carlito_syrichta
ENSDNOG00000036372	PCBP1	99	99.298	ENSCPOG00000013511	PCBP1	80	99.298	Cavia_porcellus
ENSDNOG00000036372	PCBP1	99	99.298	ENSCCAG00000019842	-	80	99.298	Cebus_capucinus
ENSDNOG00000036372	PCBP1	99	89.825	ENSCCAG00000029186	-	79	89.399	Cebus_capucinus
ENSDNOG00000036372	PCBP1	99	99.298	ENSCATG00000015029	PCBP1	80	99.298	Cercocebus_atys
ENSDNOG00000036372	PCBP1	99	98.596	ENSCLAG00000017909	PCBP1	80	98.596	Chinchilla_lanigera
ENSDNOG00000036372	PCBP1	99	99.298	ENSCSAG00000019441	PCBP1	80	99.298	Chlorocebus_sabaeus
ENSDNOG00000036372	PCBP1	99	88.421	ENSCANG00000032470	-	74	88.421	Colobus_angolensis_palliatus
ENSDNOG00000036372	PCBP1	89	83.922	ENSCANG00000033810	-	87	83.922	Colobus_angolensis_palliatus
ENSDNOG00000036372	PCBP1	99	99.298	ENSCANG00000018039	-	80	99.298	Colobus_angolensis_palliatus
ENSDNOG00000036372	PCBP1	99	99.298	ENSCGRG00001015078	Pcbp1	80	99.298	Cricetulus_griseus_chok1gshd
ENSDNOG00000036372	PCBP1	99	99.298	ENSCGRG00000018899	Pcbp1	80	99.298	Cricetulus_griseus_crigri
ENSDNOG00000036372	PCBP1	99	99.298	ENSDORG00000008216	Pcbp1	80	99.298	Dipodomys_ordii
ENSDNOG00000036372	PCBP1	99	99.298	ENSFCAG00000022238	PCBP1	80	99.298	Felis_catus
ENSDNOG00000036372	PCBP1	99	99.298	ENSFDAG00000019637	PCBP1	80	99.298	Fukomys_damarensis
ENSDNOG00000036372	PCBP1	99	99.298	ENSGGOG00000028130	PCBP1	80	99.298	Gorilla_gorilla
ENSDNOG00000036372	PCBP1	99	97.193	ENSHGLG00000020243	-	80	97.193	Heterocephalus_glaber_female
ENSDNOG00000036372	PCBP1	99	99.298	ENSHGLG00000020345	Pcbp1	80	99.298	Heterocephalus_glaber_female
ENSDNOG00000036372	PCBP1	99	99.298	ENSHGLG00100019761	Pcbp1	80	99.298	Heterocephalus_glaber_male
ENSDNOG00000036372	PCBP1	99	98.947	ENSHGLG00100019620	-	80	98.947	Heterocephalus_glaber_male
ENSDNOG00000036372	PCBP1	99	99.298	ENSSTOG00000026002	PCBP1	80	99.298	Ictidomys_tridecemlineatus
ENSDNOG00000036372	PCBP1	99	99.298	ENSJJAG00000000737	Pcbp1	80	99.298	Jaculus_jaculus
ENSDNOG00000036372	PCBP1	99	85.614	ENSMFAG00000003400	PCBP1	83	85.614	Macaca_fascicularis
ENSDNOG00000036372	PCBP1	99	99.298	ENSMMUG00000038295	PCBP1	80	99.298	Macaca_mulatta
ENSDNOG00000036372	PCBP1	99	99.298	ENSMNEG00000002934	PCBP1	80	99.298	Macaca_nemestrina
ENSDNOG00000036372	PCBP1	99	99.298	ENSMLEG00000027389	PCBP1	80	99.298	Mandrillus_leucophaeus
ENSDNOG00000036372	PCBP1	99	98.947	ENSMAUG00000009843	Pcbp1	80	98.947	Mesocricetus_auratus
ENSDNOG00000036372	PCBP1	99	99.298	ENSMICG00000038221	PCBP1	80	99.298	Microcebus_murinus
ENSDNOG00000036372	PCBP1	99	99.298	ENSMOCG00000008102	Pcbp1	80	99.298	Microtus_ochrogaster
ENSDNOG00000036372	PCBP1	99	99.298	MGP_CAROLIEiJ_G0028598	Pcbp1	80	99.298	Mus_caroli
ENSDNOG00000036372	PCBP1	99	99.298	ENSMUSG00000051695	Pcbp1	80	99.298	Mus_musculus
ENSDNOG00000036372	PCBP1	99	99.298	MGP_PahariEiJ_G0022335	Pcbp1	80	99.298	Mus_pahari
ENSDNOG00000036372	PCBP1	99	99.298	MGP_SPRETEiJ_G0029609	Pcbp1	80	99.298	Mus_spretus
ENSDNOG00000036372	PCBP1	99	95.789	ENSMPUG00000007175	PCBP1	79	95.789	Mustela_putorius_furo
ENSDNOG00000036372	PCBP1	99	99.298	ENSMLUG00000014173	PCBP1	80	99.298	Myotis_lucifugus
ENSDNOG00000036372	PCBP1	99	99.298	ENSNGAG00000014909	-	80	99.298	Nannospalax_galili
ENSDNOG00000036372	PCBP1	99	99.298	ENSNGAG00000011957	-	80	99.298	Nannospalax_galili
ENSDNOG00000036372	PCBP1	99	99.298	ENSNLEG00000018722	PCBP1	80	99.298	Nomascus_leucogenys
ENSDNOG00000036372	PCBP1	99	78.621	ENSODEG00000000263	PCBP1	79	78.621	Octodon_degus
ENSDNOG00000036372	PCBP1	99	99.298	ENSOCUG00000003634	PCBP1	80	99.298	Oryctolagus_cuniculus
ENSDNOG00000036372	PCBP1	99	95.789	ENSOGAG00000028946	PCBP1	79	95.789	Otolemur_garnettii
ENSDNOG00000036372	PCBP1	99	99.298	ENSOARG00000019516	PCBP1	80	99.298	Ovis_aries
ENSDNOG00000036372	PCBP1	99	99.298	ENSPPAG00000036116	PCBP1	79	99.298	Pan_paniscus
ENSDNOG00000036372	PCBP1	99	99.298	ENSPPRG00000020533	PCBP1	80	99.298	Panthera_pardus
ENSDNOG00000036372	PCBP1	99	99.298	ENSPTIG00000007318	PCBP1	80	99.298	Panthera_tigris_altaica
ENSDNOG00000036372	PCBP1	99	99.298	ENSPTRG00000012025	PCBP1	80	99.298	Pan_troglodytes
ENSDNOG00000036372	PCBP1	99	99.298	ENSPANG00000011314	PCBP1	80	99.298	Papio_anubis
ENSDNOG00000036372	PCBP1	99	99.298	ENSPPYG00000012328	PCBP1	80	99.298	Pongo_abelii
ENSDNOG00000036372	PCBP1	99	99.298	ENSPCOG00000026934	PCBP1	80	99.298	Propithecus_coquereli
ENSDNOG00000036372	PCBP1	99	98.246	ENSRROG00000009684	-	76	98.246	Rhinopithecus_roxellana
ENSDNOG00000036372	PCBP1	91	98.084	ENSRROG00000012514	-	79	98.084	Rhinopithecus_roxellana
ENSDNOG00000036372	PCBP1	99	80.702	ENSSBOG00000035309	-	73	80.702	Saimiri_boliviensis_boliviensis
ENSDNOG00000036372	PCBP1	99	98.947	ENSSSCG00000027224	PCBP1	80	98.947	Sus_scrofa
ENSDNOG00000036372	PCBP1	63	98.889	ENSTBEG00000015706	-	51	98.889	Tupaia_belangeri
ENSDNOG00000036372	PCBP1	88	99.206	ENSVVUG00000028033	PCBP1	77	99.206	Vulpes_vulpes