EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000036662 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 369 bases
Position: chrJH570810.1:1686024-1686392
Accession: 17562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000026276	LSM	PF01423.22	9.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000034665	LSM10-201	369	-	ENSDNOP00000026276	123 (aa)	-	UPI0003CBF118

Gene Model

Click here to download ENSDNOG00000036662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000036662's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000036662	LSM10	55	30.000	ENSDNOG00000002633	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000036662	LSM10	98	94.215	ENSG00000181817	LSM10	98	94.215	Homo_sapiens
ENSDNOG00000036662	LSM10	99	93.443	ENSAMEG00000019854	LSM10	99	93.443	Ailuropoda_melanoleuca
ENSDNOG00000036662	LSM10	95	67.521	ENSACIG00000015420	oscp1a	77	67.521	Amphilophus_citrinellus
ENSDNOG00000036662	LSM10	90	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSDNOG00000036662	LSM10	96	68.644	ENSAOCG00000014654	-	98	68.644	Amphiprion_ocellaris
ENSDNOG00000036662	LSM10	96	68.644	ENSAOCG00000015618	LSM10	98	68.644	Amphiprion_ocellaris
ENSDNOG00000036662	LSM10	90	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSDNOG00000036662	LSM10	96	68.644	ENSAPEG00000021845	-	98	68.644	Amphiprion_percula
ENSDNOG00000036662	LSM10	94	62.931	ENSATEG00000006310	oscp1a	86	62.931	Anabas_testudineus
ENSDNOG00000036662	LSM10	95	70.940	ENSACAG00000001231	LSM10	95	70.940	Anolis_carolinensis
ENSDNOG00000036662	LSM10	98	95.868	ENSANAG00000018759	-	98	95.868	Aotus_nancymaae
ENSDNOG00000036662	LSM10	98	94.215	ENSANAG00000031489	-	99	94.215	Aotus_nancymaae
ENSDNOG00000036662	LSM10	96	66.949	ENSACLG00000004728	oscp1a	96	66.949	Astatotilapia_calliptera
ENSDNOG00000036662	LSM10	96	66.949	ENSAMXG00000025301	oscp1a	98	66.949	Astyanax_mexicanus
ENSDNOG00000036662	LSM10	98	92.562	ENSBTAG00000024096	LSM10	99	92.562	Bos_taurus
ENSDNOG00000036662	LSM10	98	95.041	ENSCJAG00000044880	LSM10	98	95.041	Callithrix_jacchus
ENSDNOG00000036662	LSM10	99	95.902	ENSCAFG00000003382	LSM10	99	95.902	Canis_familiaris
ENSDNOG00000036662	LSM10	99	95.902	ENSCAFG00020008920	LSM10	99	95.902	Canis_lupus_dingo
ENSDNOG00000036662	LSM10	98	92.562	ENSCHIG00000009398	LSM10	99	92.562	Capra_hircus
ENSDNOG00000036662	LSM10	99	90.984	ENSCAPG00000012567	LSM10	99	90.984	Cavia_aperea
ENSDNOG00000036662	LSM10	99	90.984	ENSCPOG00000039302	LSM10	99	90.984	Cavia_porcellus
ENSDNOG00000036662	LSM10	98	94.215	ENSCCAG00000008378	-	98	94.215	Cebus_capucinus
ENSDNOG00000036662	LSM10	98	95.868	ENSCCAG00000018913	-	98	95.868	Cebus_capucinus
ENSDNOG00000036662	LSM10	99	94.262	ENSCATG00000006589	LSM10	99	94.262	Cercocebus_atys
ENSDNOG00000036662	LSM10	99	93.443	ENSCLAG00000008633	LSM10	99	93.443	Chinchilla_lanigera
ENSDNOG00000036662	LSM10	99	94.262	ENSCSAG00000000134	LSM10	99	94.262	Chlorocebus_sabaeus
ENSDNOG00000036662	LSM10	98	94.262	ENSCHOG00000008615	LSM10	98	94.262	Choloepus_hoffmanni
ENSDNOG00000036662	LSM10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSDNOG00000036662	LSM10	99	94.262	ENSCANG00000019928	LSM10	99	94.262	Colobus_angolensis_palliatus
ENSDNOG00000036662	LSM10	98	94.167	ENSCGRG00001004317	-	98	94.167	Cricetulus_griseus_chok1gshd
ENSDNOG00000036662	LSM10	93	84.483	ENSCGRG00001022673	-	93	84.483	Cricetulus_griseus_chok1gshd
ENSDNOG00000036662	LSM10	98	94.167	ENSCGRG00000014935	-	98	94.167	Cricetulus_griseus_crigri
ENSDNOG00000036662	LSM10	93	84.483	ENSCGRG00000015514	-	93	84.483	Cricetulus_griseus_crigri
ENSDNOG00000036662	LSM10	96	64.407	ENSCSEG00000010374	oscp1a	79	64.407	Cynoglossus_semilaevis
ENSDNOG00000036662	LSM10	98	65.833	ENSCVAG00000001536	oscp1a	91	65.833	Cyprinodon_variegatus
ENSDNOG00000036662	LSM10	69	71.765	ENSDARG00000109563	CABZ01074453.1	99	71.765	Danio_rerio
ENSDNOG00000036662	LSM10	98	71.667	ENSDARG00000101222	oscp1a	99	71.667	Danio_rerio
ENSDNOG00000036662	LSM10	99	92.623	ENSDORG00000007579	Lsm10	99	92.623	Dipodomys_ordii
ENSDNOG00000036662	LSM10	99	90.984	ENSETEG00000005703	LSM10	99	90.984	Echinops_telfairi
ENSDNOG00000036662	LSM10	95	52.137	ENSEBUG00000001312	oscp1a	96	52.137	Eptatretus_burgeri
ENSDNOG00000036662	LSM10	99	95.902	ENSEASG00005012194	LSM10	99	95.902	Equus_asinus_asinus
ENSDNOG00000036662	LSM10	99	96.721	ENSECAG00000005071	LSM10	99	96.721	Equus_caballus
ENSDNOG00000036662	LSM10	99	93.443	ENSEEUG00000012032	LSM10	99	93.443	Erinaceus_europaeus
ENSDNOG00000036662	LSM10	98	69.167	ENSELUG00000007452	oscp1a	98	69.167	Esox_lucius
ENSDNOG00000036662	LSM10	95	74.359	ENSFALG00000000851	LSM10	95	74.359	Ficedula_albicollis
ENSDNOG00000036662	LSM10	99	90.164	ENSFDAG00000021056	LSM10	99	90.164	Fukomys_damarensis
ENSDNOG00000036662	LSM10	89	67.273	ENSFHEG00000001058	oscp1a	95	67.273	Fundulus_heteroclitus
ENSDNOG00000036662	LSM10	87	66.355	ENSGMOG00000019832	oscp1a	90	66.355	Gadus_morhua
ENSDNOG00000036662	LSM10	99	74.590	ENSGALG00000002127	LSM10	99	74.590	Gallus_gallus
ENSDNOG00000036662	LSM10	91	60.870	ENSGAFG00000016445	oscp1a	93	60.870	Gambusia_affinis
ENSDNOG00000036662	LSM10	96	63.559	ENSGACG00000002329	oscp1a	97	63.559	Gasterosteus_aculeatus
ENSDNOG00000036662	LSM10	99	74.590	ENSGAGG00000024848	LSM10	99	74.590	Gopherus_agassizii
ENSDNOG00000036662	LSM10	98	95.041	ENSGGOG00000003556	LSM10	98	95.041	Gorilla_gorilla
ENSDNOG00000036662	LSM10	96	66.949	ENSHBUG00000001722	oscp1a	96	66.949	Haplochromis_burtoni
ENSDNOG00000036662	LSM10	99	92.623	ENSHGLG00000011625	LSM10	99	92.623	Heterocephalus_glaber_female
ENSDNOG00000036662	LSM10	99	92.623	ENSHGLG00100001769	LSM10	99	92.623	Heterocephalus_glaber_male
ENSDNOG00000036662	LSM10	85	68.571	ENSIPUG00000005808	oscp1a	91	68.571	Ictalurus_punctatus
ENSDNOG00000036662	LSM10	99	93.443	ENSSTOG00000000606	LSM10	99	93.443	Ictidomys_tridecemlineatus
ENSDNOG00000036662	LSM10	96	64.407	ENSKMAG00000012143	oscp1a	98	64.407	Kryptolebias_marmoratus
ENSDNOG00000036662	LSM10	98	63.333	ENSLBEG00000017764	oscp1a	98	63.333	Labrus_bergylta
ENSDNOG00000036662	LSM10	99	75.410	ENSLACG00000015904	LSM10	94	75.410	Latimeria_chalumnae
ENSDNOG00000036662	LSM10	98	72.500	ENSLOCG00000018277	oscp1a	98	72.500	Lepisosteus_oculatus
ENSDNOG00000036662	LSM10	99	94.262	ENSLAFG00000009600	LSM10	99	94.262	Loxodonta_africana
ENSDNOG00000036662	LSM10	99	94.262	ENSMFAG00000009115	LSM10	99	94.262	Macaca_fascicularis
ENSDNOG00000036662	LSM10	99	94.262	ENSMMUG00000017338	LSM10	99	94.262	Macaca_mulatta
ENSDNOG00000036662	LSM10	99	94.262	ENSMNEG00000020023	LSM10	99	94.262	Macaca_nemestrina
ENSDNOG00000036662	LSM10	99	94.262	ENSMLEG00000025150	LSM10	99	94.262	Mandrillus_leucophaeus
ENSDNOG00000036662	LSM10	98	65.289	ENSMAMG00000004427	oscp1a	99	65.289	Mastacembelus_armatus
ENSDNOG00000036662	LSM10	96	66.949	ENSMZEG00005026307	oscp1a	96	66.949	Maylandia_zebra
ENSDNOG00000036662	LSM10	99	72.951	ENSMGAG00000015707	LSM10	99	72.951	Meleagris_gallopavo
ENSDNOG00000036662	LSM10	98	92.500	ENSMAUG00000016624	Lsm10	98	92.500	Mesocricetus_auratus
ENSDNOG00000036662	LSM10	98	93.333	ENSMOCG00000021943	Lsm10	98	93.333	Microtus_ochrogaster
ENSDNOG00000036662	LSM10	90	67.568	ENSMMOG00000013597	oscp1a	83	67.568	Mola_mola
ENSDNOG00000036662	LSM10	99	85.246	ENSMODG00000023328	LSM10	99	85.246	Monodelphis_domestica
ENSDNOG00000036662	LSM10	58	60.526	ENSMALG00000012661	oscp1a	60	60.526	Monopterus_albus
ENSDNOG00000036662	LSM10	98	93.333	MGP_CAROLIEiJ_G0026467	Lsm10	100	92.473	Mus_caroli
ENSDNOG00000036662	LSM10	98	94.167	ENSMUSG00000050188	Lsm10	100	93.548	Mus_musculus
ENSDNOG00000036662	LSM10	98	94.167	MGP_PahariEiJ_G0028798	Lsm10	100	93.548	Mus_pahari
ENSDNOG00000036662	LSM10	98	94.167	MGP_SPRETEiJ_G0027446	Lsm10	100	93.548	Mus_spretus
ENSDNOG00000036662	LSM10	99	95.902	ENSMPUG00000018593	LSM10	99	95.902	Mustela_putorius_furo
ENSDNOG00000036662	LSM10	99	88.525	ENSMLUG00000023895	LSM10	99	88.525	Myotis_lucifugus
ENSDNOG00000036662	LSM10	98	95.000	ENSNGAG00000015011	Lsm10	98	95.000	Nannospalax_galili
ENSDNOG00000036662	LSM10	96	67.797	ENSNBRG00000014306	oscp1a	96	67.797	Neolamprologus_brichardi
ENSDNOG00000036662	LSM10	98	94.215	ENSNLEG00000033754	LSM10	98	94.215	Nomascus_leucogenys
ENSDNOG00000036662	LSM10	99	85.246	ENSMEUG00000006313	LSM10	99	85.246	Notamacropus_eugenii
ENSDNOG00000036662	LSM10	99	91.803	ENSOPRG00000001699	LSM10	99	91.803	Ochotona_princeps
ENSDNOG00000036662	LSM10	99	93.443	ENSODEG00000019161	LSM10	99	93.443	Octodon_degus
ENSDNOG00000036662	LSM10	96	67.797	ENSONIG00000020904	oscp1a	97	67.797	Oreochromis_niloticus
ENSDNOG00000036662	LSM10	98	77.686	ENSOANG00000002066	LSM10	98	77.686	Ornithorhynchus_anatinus
ENSDNOG00000036662	LSM10	99	90.984	ENSOCUG00000005333	LSM10	99	90.984	Oryctolagus_cuniculus
ENSDNOG00000036662	LSM10	96	66.102	ENSORLG00000009504	oscp1a	98	66.102	Oryzias_latipes
ENSDNOG00000036662	LSM10	96	66.102	ENSORLG00020016201	oscp1a	98	66.102	Oryzias_latipes_hni
ENSDNOG00000036662	LSM10	96	66.102	ENSORLG00015007794	oscp1a	97	66.102	Oryzias_latipes_hsok
ENSDNOG00000036662	LSM10	99	94.262	ENSOGAG00000002653	LSM10	99	94.262	Otolemur_garnettii
ENSDNOG00000036662	LSM10	98	92.562	ENSOARG00000009596	LSM10	99	92.562	Ovis_aries
ENSDNOG00000036662	LSM10	98	94.215	ENSPPAG00000023465	LSM10	98	94.215	Pan_paniscus
ENSDNOG00000036662	LSM10	99	96.721	ENSPPRG00000014619	LSM10	99	96.721	Panthera_pardus
ENSDNOG00000036662	LSM10	99	96.721	ENSPTIG00000004613	LSM10	99	96.721	Panthera_tigris_altaica
ENSDNOG00000036662	LSM10	98	94.215	ENSPTRG00000000539	LSM10	98	94.215	Pan_troglodytes
ENSDNOG00000036662	LSM10	99	94.262	ENSPANG00000023172	LSM10	99	94.262	Papio_anubis
ENSDNOG00000036662	LSM10	98	67.500	ENSPKIG00000003728	oscp1a	97	67.500	Paramormyrops_kingsleyae
ENSDNOG00000036662	LSM10	99	73.770	ENSPSIG00000000590	LSM10	99	73.770	Pelodiscus_sinensis
ENSDNOG00000036662	LSM10	62	65.789	ENSPMGG00000015718	oscp1a	99	65.789	Periophthalmus_magnuspinnatus
ENSDNOG00000036662	LSM10	84	87.379	ENSPCIG00000014865	LSM10	76	87.379	Phascolarctos_cinereus
ENSDNOG00000036662	LSM10	91	67.857	ENSPFOG00000020490	oscp1a	95	67.857	Poecilia_formosa
ENSDNOG00000036662	LSM10	91	67.857	ENSPLAG00000016537	oscp1a	85	67.857	Poecilia_latipinna
ENSDNOG00000036662	LSM10	88	68.519	ENSPMEG00000000174	oscp1a	94	68.519	Poecilia_mexicana
ENSDNOG00000036662	LSM10	91	66.964	ENSPREG00000009899	oscp1a	85	66.964	Poecilia_reticulata
ENSDNOG00000036662	LSM10	98	95.041	ENSPPYG00000001539	LSM10	98	95.041	Pongo_abelii
ENSDNOG00000036662	LSM10	98	91.736	ENSPCAG00000002520	LSM10	98	91.736	Procavia_capensis
ENSDNOG00000036662	LSM10	99	91.803	ENSPVAG00000008644	LSM10	99	91.803	Pteropus_vampyrus
ENSDNOG00000036662	LSM10	96	66.949	ENSPNYG00000003138	oscp1a	96	66.949	Pundamilia_nyererei
ENSDNOG00000036662	LSM10	95	65.812	ENSPNAG00000028829	oscp1a	97	65.812	Pygocentrus_nattereri
ENSDNOG00000036662	LSM10	98	95.000	ENSRNOG00000025716	Lsm10	98	95.000	Rattus_norvegicus
ENSDNOG00000036662	LSM10	99	94.262	ENSRBIG00000001561	LSM10	99	94.262	Rhinopithecus_bieti
ENSDNOG00000036662	LSM10	99	94.262	ENSRROG00000011414	LSM10	99	94.262	Rhinopithecus_roxellana
ENSDNOG00000036662	LSM10	98	95.868	ENSSBOG00000036413	-	98	95.868	Saimiri_boliviensis_boliviensis
ENSDNOG00000036662	LSM10	99	84.426	ENSSHAG00000018056	LSM10	99	84.426	Sarcophilus_harrisii
ENSDNOG00000036662	LSM10	98	66.116	ENSSFOG00015019954	lsm10	99	66.116	Scleropages_formosus
ENSDNOG00000036662	LSM10	93	66.087	ENSSMAG00000001297	oscp1a	98	66.087	Scophthalmus_maximus
ENSDNOG00000036662	LSM10	98	65.574	ENSSDUG00000007090	oscp1a	99	65.574	Seriola_dumerili
ENSDNOG00000036662	LSM10	95	66.667	ENSSLDG00000000800	oscp1a	97	66.667	Seriola_lalandi_dorsalis
ENSDNOG00000036662	LSM10	99	92.742	ENSSARG00000004211	LSM10	99	94.355	Sorex_araneus
ENSDNOG00000036662	LSM10	94	66.379	ENSSPAG00000009229	oscp1a	96	66.379	Stegastes_partitus
ENSDNOG00000036662	LSM10	98	93.388	ENSSSCG00000038916	LSM10	98	93.388	Sus_scrofa
ENSDNOG00000036662	LSM10	99	72.131	ENSTGUG00000001600	-	100	72.131	Taeniopygia_guttata
ENSDNOG00000036662	LSM10	99	72.131	ENSTGUG00000001602	-	100	72.131	Taeniopygia_guttata
ENSDNOG00000036662	LSM10	96	66.949	ENSTRUG00000010531	oscp1a	95	66.949	Takifugu_rubripes
ENSDNOG00000036662	LSM10	98	95.041	ENSTBEG00000016674	LSM10	98	95.041	Tupaia_belangeri
ENSDNOG00000036662	LSM10	99	94.262	ENSUAMG00000020265	LSM10	99	94.262	Ursus_americanus
ENSDNOG00000036662	LSM10	99	94.262	ENSUMAG00000001438	LSM10	56	94.262	Ursus_maritimus
ENSDNOG00000036662	LSM10	99	95.902	ENSVVUG00000023209	LSM10	99	95.902	Vulpes_vulpes
ENSDNOG00000036662	LSM10	98	70.000	ENSXETG00000027631	lsm10	98	70.000	Xenopus_tropicalis
ENSDNOG00000036662	LSM10	94	63.793	ENSXCOG00000018776	oscp1a	73	63.793	Xiphophorus_couchianus
ENSDNOG00000036662	LSM10	95	62.500	ENSXMAG00000019963	oscp1a	96	62.500	Xiphophorus_maculatus