EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000037397 (Gene tree)
Gene ID: 101444642
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 12744 bases
Position: chrJH582577.1:492708-505451
Accession: 101444642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000023937	RRM_1	PF00076.22	5.5e-18	1	1
ENSDNOP00000034410	RRM_1	PF00076.22	6.1e-18	1	1
ENSDNOP00000032475	RRM_1	PF00076.22	6.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000050868	RBM42-202	4084	-	ENSDNOP00000034410	479 (aa)	XP_004483357	UPI000328D2F6
ENSDNOT00000037461	RBM42-203	3997	-	ENSDNOP00000023937	450 (aa)	XP_004483358	UPI00032887A6
ENSDNOT00000038847	RBM42-201	2310	-	ENSDNOP00000032475	495 (aa)	-	UPI0003CBF442

Gene Model

Click here to download ENSDNOG00000037397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000037397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000037397	RBM42	100	96.894	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSDNOG00000037397	RBM42	100	96.473	ENSAMEG00000000524	RBM42	100	96.473	Ailuropoda_melanoleuca
ENSDNOG00000037397	RBM42	100	96.667	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSDNOG00000037397	RBM42	100	96.667	ENSBTAG00000013440	RBM42	100	96.667	Bos_taurus
ENSDNOG00000037397	RBM42	100	97.118	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSDNOG00000037397	RBM42	100	87.708	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSDNOG00000037397	RBM42	100	96.896	ENSCHIG00000009518	RBM42	100	96.896	Capra_hircus
ENSDNOG00000037397	RBM42	100	96.875	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSDNOG00000037397	RBM42	81	97.172	ENSCAPG00000009566	RBM42	99	97.172	Cavia_aperea
ENSDNOG00000037397	RBM42	100	96.896	ENSCPOG00000012365	RBM42	99	96.896	Cavia_porcellus
ENSDNOG00000037397	RBM42	100	97.292	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSDNOG00000037397	RBM42	100	96.687	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSDNOG00000037397	RBM42	100	96.231	ENSCLAG00000012865	RBM42	99	96.231	Chinchilla_lanigera
ENSDNOG00000037397	RBM42	100	96.476	ENSCSAG00000004422	RBM42	100	96.476	Chlorocebus_sabaeus
ENSDNOG00000037397	RBM42	100	87.292	ENSCANG00000030272	RBM42	100	87.292	Colobus_angolensis_palliatus
ENSDNOG00000037397	RBM42	100	95.833	ENSCGRG00001018540	Rbm42	99	95.833	Cricetulus_griseus_chok1gshd
ENSDNOG00000037397	RBM42	100	95.833	ENSDORG00000013001	Rbm42	99	95.833	Dipodomys_ordii
ENSDNOG00000037397	RBM42	76	89.855	ENSETEG00000007878	RBM42	74	89.855	Echinops_telfairi
ENSDNOG00000037397	RBM42	100	97.118	ENSEASG00005001074	RBM42	100	97.118	Equus_asinus_asinus
ENSDNOG00000037397	RBM42	100	97.118	ENSECAG00000018215	RBM42	100	97.118	Equus_caballus
ENSDNOG00000037397	RBM42	100	97.083	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSDNOG00000037397	RBM42	100	96.452	ENSFDAG00000007440	RBM42	99	96.452	Fukomys_damarensis
ENSDNOG00000037397	RBM42	100	96.894	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSDNOG00000037397	RBM42	100	95.111	ENSHGLG00000008418	RBM42	99	95.111	Heterocephalus_glaber_female
ENSDNOG00000037397	RBM42	100	95.111	ENSHGLG00100018667	RBM42	99	95.111	Heterocephalus_glaber_male
ENSDNOG00000037397	RBM42	100	97.118	ENSSTOG00000013050	RBM42	99	97.118	Ictidomys_tridecemlineatus
ENSDNOG00000037397	RBM42	100	95.565	ENSJJAG00000010421	Rbm42	99	95.565	Jaculus_jaculus
ENSDNOG00000037397	RBM42	98	92.357	ENSLAFG00000014993	RBM42	99	90.417	Loxodonta_africana
ENSDNOG00000037397	RBM42	100	96.687	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSDNOG00000037397	RBM42	100	96.687	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSDNOG00000037397	RBM42	100	96.687	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSDNOG00000037397	RBM42	100	96.687	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSDNOG00000037397	RBM42	100	97.708	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSDNOG00000037397	RBM42	100	95.625	ENSMOCG00000000405	Rbm42	99	95.625	Microtus_ochrogaster
ENSDNOG00000037397	RBM42	100	96.250	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.250	Mus_caroli
ENSDNOG00000037397	RBM42	100	96.250	ENSMUSG00000036733	Rbm42	99	96.250	Mus_musculus
ENSDNOG00000037397	RBM42	100	96.250	MGP_PahariEiJ_G0012770	Rbm42	99	96.250	Mus_pahari
ENSDNOG00000037397	RBM42	100	96.250	MGP_SPRETEiJ_G0030632	Rbm42	99	96.250	Mus_spretus
ENSDNOG00000037397	RBM42	100	97.118	ENSMPUG00000006288	RBM42	100	97.118	Mustela_putorius_furo
ENSDNOG00000037397	RBM42	100	96.042	ENSMLUG00000011334	RBM42	100	96.042	Myotis_lucifugus
ENSDNOG00000037397	RBM42	100	95.625	ENSNGAG00000019698	Rbm42	99	92.708	Nannospalax_galili
ENSDNOG00000037397	RBM42	98	73.483	ENSNLEG00000011272	-	94	91.136	Nomascus_leucogenys
ENSDNOG00000037397	RBM42	96	83.405	ENSMEUG00000016300	RBM42	100	84.091	Notamacropus_eugenii
ENSDNOG00000037397	RBM42	100	92.902	ENSOPRG00000001229	RBM42	100	87.683	Ochotona_princeps
ENSDNOG00000037397	RBM42	100	96.452	ENSODEG00000013705	RBM42	99	96.452	Octodon_degus
ENSDNOG00000037397	RBM42	100	96.035	ENSOCUG00000003337	RBM42	100	96.035	Oryctolagus_cuniculus
ENSDNOG00000037397	RBM42	100	96.042	ENSOGAG00000004144	RBM42	100	96.042	Otolemur_garnettii
ENSDNOG00000037397	RBM42	100	97.292	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSDNOG00000037397	RBM42	100	97.083	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSDNOG00000037397	RBM42	100	96.667	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSDNOG00000037397	RBM42	100	96.894	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSDNOG00000037397	RBM42	100	96.250	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSDNOG00000037397	RBM42	100	96.667	ENSPEMG00000012065	Rbm42	99	96.667	Peromyscus_maniculatus_bairdii
ENSDNOG00000037397	RBM42	100	96.708	ENSPPYG00000009871	RBM42	100	96.708	Pongo_abelii
ENSDNOG00000037397	RBM42	89	95.455	ENSPCAG00000013053	RBM42	100	83.542	Procavia_capensis
ENSDNOG00000037397	RBM42	100	97.708	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSDNOG00000037397	RBM42	70	98.214	ENSPCOG00000020672	RBM42	81	98.214	Propithecus_coquereli
ENSDNOG00000037397	RBM42	100	97.083	ENSPVAG00000012815	RBM42	100	97.083	Pteropus_vampyrus
ENSDNOG00000037397	RBM42	100	96.458	ENSRNOG00000024278	Rbm42	99	96.458	Rattus_norvegicus
ENSDNOG00000037397	RBM42	100	96.687	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSDNOG00000037397	RBM42	100	97.292	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSDNOG00000037397	RBM42	85	98.044	ENSSBOG00000030666	RBM42	100	98.044	Saimiri_boliviensis_boliviensis
ENSDNOG00000037397	RBM42	100	86.749	ENSSARG00000010724	RBM42	100	86.749	Sorex_araneus
ENSDNOG00000037397	RBM42	100	96.009	ENSSSCG00000002905	RBM42	100	96.009	Sus_scrofa
ENSDNOG00000037397	RBM42	100	96.667	ENSUAMG00000020711	RBM42	100	96.667	Ursus_americanus
ENSDNOG00000037397	RBM42	100	96.667	ENSUMAG00000020223	RBM42	100	96.667	Ursus_maritimus
ENSDNOG00000037397	RBM42	100	97.118	ENSVVUG00000015117	RBM42	100	97.118	Vulpes_vulpes