EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000038853 (Gene tree)
Gene ID: 101440834
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 33794 bases
Position: chrJH571165.1:302569-336362
Accession: 101440834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000020317	MMR_HSR1	PF01926.23	0.0001	1	1
ENSDNOP00000027424	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000043689	RAB5C-201	2222	-	ENSDNOP00000020317	203 (aa)	-	UPI0003CC05CE
ENSDNOT00000034715	RAB5C-202	1783	XM_004472442	ENSDNOP00000027424	216 (aa)	XP_004472497	UPI000328B7C6

Gene Model

Click here to download ENSDNOG00000038853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000038853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000038853	RAB5C	82	43.713	ENSDNOG00000042746	RAB6A	84	44.000
ENSDNOG00000038853	RAB5C	90	31.148	ENSDNOG00000046741	KRAS	96	31.148
ENSDNOG00000038853	RAB5C	89	34.848	ENSDNOG00000025749	RAB9A	96	34.848
ENSDNOG00000038853	RAB5C	89	34.343	ENSDNOG00000032358	RAB9B	97	34.343
ENSDNOG00000038853	RAB5C	75	35.948	ENSDNOG00000035151	-	67	35.948
ENSDNOG00000038853	RAB5C	80	36.416	ENSDNOG00000015501	RAB23	73	36.416
ENSDNOG00000038853	RAB5C	58	31.148	ENSDNOG00000048007	ARL8A	61	31.148
ENSDNOG00000038853	RAB5C	85	41.279	ENSDNOG00000039115	RAB30	83	42.604
ENSDNOG00000038853	RAB5C	81	31.548	ENSDNOG00000019485	RAB34	64	32.143
ENSDNOG00000038853	RAB5C	98	41.256	ENSDNOG00000014618	RAB11B	99	41.256
ENSDNOG00000038853	RAB5C	80	33.333	ENSDNOG00000043559	-	95	32.161
ENSDNOG00000038853	RAB5C	81	33.149	ENSDNOG00000015293	HRAS	94	33.149
ENSDNOG00000038853	RAB5C	77	46.203	ENSDNOG00000039155	RAB25	64	45.679
ENSDNOG00000038853	RAB5C	90	42.512	ENSDNOG00000004134	-	94	42.512
ENSDNOG00000038853	RAB5C	69	37.415	ENSDNOG00000033622	RAB39B	78	34.857
ENSDNOG00000038853	RAB5C	89	44.388	ENSDNOG00000018236	RAB1A	95	44.388
ENSDNOG00000038853	RAB5C	86	32.759	ENSDNOG00000031679	-	76	32.759
ENSDNOG00000038853	RAB5C	84	35.260	ENSDNOG00000039895	RAB36	61	35.632
ENSDNOG00000038853	RAB5C	80	34.731	ENSDNOG00000043703	RERG	85	32.948
ENSDNOG00000038853	RAB5C	91	48.223	ENSDNOG00000019384	RAB31	98	48.223
ENSDNOG00000038853	RAB5C	100	87.500	ENSDNOG00000038467	RAB5A	100	87.500
ENSDNOG00000038853	RAB5C	85	41.799	ENSDNOG00000047713	RAB18	94	39.801
ENSDNOG00000038853	RAB5C	77	40.127	ENSDNOG00000006592	RAB15	75	39.623
ENSDNOG00000038853	RAB5C	52	46.667	ENSDNOG00000038845	-	72	45.370
ENSDNOG00000038853	RAB5C	90	42.512	ENSDNOG00000038479	RAB11A	78	42.512
ENSDNOG00000038853	RAB5C	89	38.579	ENSDNOG00000005253	RAB33B	80	38.579
ENSDNOG00000038853	RAB5C	78	39.877	ENSDNOG00000048455	RAB33A	70	40.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000038853	RAB5C	100	98.611	ENSG00000108774	RAB5C	100	99.194	Homo_sapiens
ENSDNOG00000038853	RAB5C	99	88.372	ENSAPOG00000016864	rab5c	98	90.698	Acanthochromis_polyacanthus
ENSDNOG00000038853	RAB5C	100	98.611	ENSAMEG00000006003	RAB5C	100	98.611	Ailuropoda_melanoleuca
ENSDNOG00000038853	RAB5C	99	87.963	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSDNOG00000038853	RAB5C	99	88.426	ENSAOCG00000016614	rab5c	98	90.741	Amphiprion_ocellaris
ENSDNOG00000038853	RAB5C	97	88.152	ENSAPEG00000017868	-	97	90.521	Amphiprion_percula
ENSDNOG00000038853	RAB5C	100	88.991	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSDNOG00000038853	RAB5C	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSDNOG00000038853	RAB5C	99	87.037	ENSACLG00000002706	rab5c	98	89.815	Astatotilapia_calliptera
ENSDNOG00000038853	RAB5C	96	89.573	ENSACLG00000008615	-	99	89.041	Astatotilapia_calliptera
ENSDNOG00000038853	RAB5C	96	88.095	ENSAMXG00000037267	-	99	90.476	Astyanax_mexicanus
ENSDNOG00000038853	RAB5C	99	88.940	ENSAMXG00000043717	rab5c	98	91.244	Astyanax_mexicanus
ENSDNOG00000038853	RAB5C	100	98.611	ENSBTAG00000006982	RAB5C	100	98.611	Bos_taurus
ENSDNOG00000038853	RAB5C	98	77.723	WBGene00004268	rab-5	96	77.723	Caenorhabditis_elegans
ENSDNOG00000038853	RAB5C	100	98.148	ENSCAFG00000015629	RAB5C	100	98.148	Canis_familiaris
ENSDNOG00000038853	RAB5C	100	98.148	ENSCAFG00020013537	RAB5C	100	98.148	Canis_lupus_dingo
ENSDNOG00000038853	RAB5C	100	98.611	ENSCHIG00000012960	RAB5C	100	98.611	Capra_hircus
ENSDNOG00000038853	RAB5C	100	99.074	ENSTSYG00000030531	RAB5C	100	99.074	Carlito_syrichta
ENSDNOG00000038853	RAB5C	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSDNOG00000038853	RAB5C	100	98.611	ENSCATG00000040873	RAB5C	100	98.611	Cercocebus_atys
ENSDNOG00000038853	RAB5C	100	96.759	ENSCLAG00000016650	RAB5C	100	96.759	Chinchilla_lanigera
ENSDNOG00000038853	RAB5C	88	98.876	ENSCHOG00000009886	RAB5C	100	98.876	Choloepus_hoffmanni
ENSDNOG00000038853	RAB5C	99	76.636	ENSCING00000003340	-	99	76.636	Ciona_intestinalis
ENSDNOG00000038853	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSDNOG00000038853	RAB5C	100	98.148	ENSCGRG00001014226	Rab5c	100	98.148	Cricetulus_griseus_chok1gshd
ENSDNOG00000038853	RAB5C	100	98.148	ENSCGRG00000007534	Rab5c	100	98.148	Cricetulus_griseus_crigri
ENSDNOG00000038853	RAB5C	99	90.741	ENSCSEG00000017024	rab5c	98	90.741	Cynoglossus_semilaevis
ENSDNOG00000038853	RAB5C	99	88.426	ENSCVAG00000009550	rab5c	98	90.741	Cyprinodon_variegatus
ENSDNOG00000038853	RAB5C	100	98.148	ENSDORG00000006819	Rab5c	100	98.148	Dipodomys_ordii
ENSDNOG00000038853	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSDNOG00000038853	RAB5C	99	79.070	ENSEBUG00000014794	rab5c	100	79.070	Eptatretus_burgeri
ENSDNOG00000038853	RAB5C	100	98.611	ENSEASG00005009281	RAB5C	100	98.611	Equus_asinus_asinus
ENSDNOG00000038853	RAB5C	100	99.074	ENSECAG00000025054	RAB5C	100	99.074	Equus_caballus
ENSDNOG00000038853	RAB5C	100	98.611	ENSEEUG00000002790	RAB5C	100	98.611	Erinaceus_europaeus
ENSDNOG00000038853	RAB5C	99	87.037	ENSELUG00000018516	rab5c	99	89.815	Esox_lucius
ENSDNOG00000038853	RAB5C	99	87.963	ENSELUG00000010439	-	98	87.963	Esox_lucius
ENSDNOG00000038853	RAB5C	100	98.611	ENSFCAG00000002148	RAB5C	100	98.611	Felis_catus
ENSDNOG00000038853	RAB5C	100	94.907	ENSFDAG00000021541	RAB5C	100	94.907	Fukomys_damarensis
ENSDNOG00000038853	RAB5C	99	88.426	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSDNOG00000038853	RAB5C	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSDNOG00000038853	RAB5C	85	86.628	ENSGMOG00000001876	-	99	86.628	Gadus_morhua
ENSDNOG00000038853	RAB5C	99	87.037	ENSGMOG00000015096	rab5c	98	89.815	Gadus_morhua
ENSDNOG00000038853	RAB5C	96	90.952	ENSGAFG00000003642	-	99	88.182	Gambusia_affinis
ENSDNOG00000038853	RAB5C	99	88.889	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSDNOG00000038853	RAB5C	89	92.778	ENSGACG00000008659	rab5c	98	86.574	Gasterosteus_aculeatus
ENSDNOG00000038853	RAB5C	100	98.611	ENSGGOG00000005472	RAB5C	100	98.611	Gorilla_gorilla
ENSDNOG00000038853	RAB5C	99	87.037	ENSHBUG00000002014	rab5c	98	89.815	Haplochromis_burtoni
ENSDNOG00000038853	RAB5C	96	89.573	ENSHBUG00000006823	-	99	89.041	Haplochromis_burtoni
ENSDNOG00000038853	RAB5C	100	96.296	ENSHGLG00000012067	RAB5C	100	96.296	Heterocephalus_glaber_female
ENSDNOG00000038853	RAB5C	99	88.940	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSDNOG00000038853	RAB5C	97	81.604	ENSHCOG00000020238	-	100	80.000	Hippocampus_comes
ENSDNOG00000038853	RAB5C	96	87.619	ENSIPUG00000020082	rab5c	98	88.073	Ictalurus_punctatus
ENSDNOG00000038853	RAB5C	100	97.222	ENSSTOG00000006620	RAB5C	100	97.222	Ictidomys_tridecemlineatus
ENSDNOG00000038853	RAB5C	100	99.537	ENSJJAG00000021181	Rab5c	100	99.537	Jaculus_jaculus
ENSDNOG00000038853	RAB5C	99	88.479	ENSKMAG00000017417	-	99	88.479	Kryptolebias_marmoratus
ENSDNOG00000038853	RAB5C	99	87.963	ENSKMAG00000020038	rab5c	98	90.741	Kryptolebias_marmoratus
ENSDNOG00000038853	RAB5C	99	89.352	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSDNOG00000038853	RAB5C	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSDNOG00000038853	RAB5C	99	92.523	ENSLOCG00000012566	rab5c	100	92.523	Lepisosteus_oculatus
ENSDNOG00000038853	RAB5C	100	98.611	ENSMFAG00000039627	RAB5C	100	98.611	Macaca_fascicularis
ENSDNOG00000038853	RAB5C	100	98.611	ENSMNEG00000000355	RAB5C	100	98.611	Macaca_nemestrina
ENSDNOG00000038853	RAB5C	99	87.500	ENSMAMG00000022322	rab5c	98	90.278	Mastacembelus_armatus
ENSDNOG00000038853	RAB5C	99	88.018	ENSMAMG00000016207	-	99	88.018	Mastacembelus_armatus
ENSDNOG00000038853	RAB5C	96	89.573	ENSMZEG00005021090	-	99	89.041	Maylandia_zebra
ENSDNOG00000038853	RAB5C	99	87.037	ENSMZEG00005022735	rab5c	98	89.815	Maylandia_zebra
ENSDNOG00000038853	RAB5C	100	98.611	ENSMAUG00000015005	Rab5c	100	98.611	Mesocricetus_auratus
ENSDNOG00000038853	RAB5C	100	98.611	ENSMICG00000041608	RAB5C	100	98.611	Microcebus_murinus
ENSDNOG00000038853	RAB5C	100	98.148	ENSMOCG00000018531	-	100	98.148	Microtus_ochrogaster
ENSDNOG00000038853	RAB5C	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSDNOG00000038853	RAB5C	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSDNOG00000038853	RAB5C	97	83.886	ENSMALG00000006052	rab5c	96	83.721	Monopterus_albus
ENSDNOG00000038853	RAB5C	100	98.148	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.148	Mus_caroli
ENSDNOG00000038853	RAB5C	100	98.148	ENSMUSG00000019173	Rab5c	100	98.148	Mus_musculus
ENSDNOG00000038853	RAB5C	100	98.148	MGP_PahariEiJ_G0018314	Rab5c	100	98.148	Mus_pahari
ENSDNOG00000038853	RAB5C	100	98.148	MGP_SPRETEiJ_G0018027	Rab5c	100	98.148	Mus_spretus
ENSDNOG00000038853	RAB5C	100	98.611	ENSMPUG00000010554	RAB5C	100	98.611	Mustela_putorius_furo
ENSDNOG00000038853	RAB5C	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSDNOG00000038853	RAB5C	99	87.963	ENSNBRG00000018165	rab5c	98	90.741	Neolamprologus_brichardi
ENSDNOG00000038853	RAB5C	96	89.573	ENSNBRG00000016922	-	99	89.041	Neolamprologus_brichardi
ENSDNOG00000038853	RAB5C	88	92.135	ENSOPRG00000008255	RAB5C	100	92.135	Ochotona_princeps
ENSDNOG00000038853	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSDNOG00000038853	RAB5C	99	87.963	ENSONIG00000001113	rab5c	98	90.741	Oreochromis_niloticus
ENSDNOG00000038853	RAB5C	100	87.615	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSDNOG00000038853	RAB5C	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSDNOG00000038853	RAB5C	100	87.615	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSDNOG00000038853	RAB5C	100	87.615	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSDNOG00000038853	RAB5C	100	98.611	ENSOGAG00000009456	RAB5C	100	98.611	Otolemur_garnettii
ENSDNOG00000038853	RAB5C	100	98.611	ENSOARG00000018768	RAB5C	100	98.611	Ovis_aries
ENSDNOG00000038853	RAB5C	100	98.611	ENSPPAG00000037206	RAB5C	100	98.611	Pan_paniscus
ENSDNOG00000038853	RAB5C	100	98.611	ENSPPRG00000005745	RAB5C	100	98.611	Panthera_pardus
ENSDNOG00000038853	RAB5C	100	98.611	ENSPTIG00000008177	RAB5C	100	98.611	Panthera_tigris_altaica
ENSDNOG00000038853	RAB5C	100	98.611	ENSPTRG00000009194	RAB5C	100	98.611	Pan_troglodytes
ENSDNOG00000038853	RAB5C	99	87.500	ENSPKIG00000020112	-	99	87.500	Paramormyrops_kingsleyae
ENSDNOG00000038853	RAB5C	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSDNOG00000038853	RAB5C	99	85.648	ENSPMGG00000010792	rab5c	97	90.047	Periophthalmus_magnuspinnatus
ENSDNOG00000038853	RAB5C	100	98.148	ENSPEMG00000017971	Rab5c	100	98.148	Peromyscus_maniculatus_bairdii
ENSDNOG00000038853	RAB5C	94	83.590	ENSPMAG00000000008	rab5c	100	77.679	Petromyzon_marinus
ENSDNOG00000038853	RAB5C	99	78.505	ENSPMAG00000007867	rab5c	99	78.505	Petromyzon_marinus
ENSDNOG00000038853	RAB5C	99	79.070	ENSPMAG00000001399	rab5c	100	79.070	Petromyzon_marinus
ENSDNOG00000038853	RAB5C	100	96.759	ENSPCIG00000020225	-	100	96.759	Phascolarctos_cinereus
ENSDNOG00000038853	RAB5C	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSDNOG00000038853	RAB5C	99	88.889	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSDNOG00000038853	RAB5C	99	88.889	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSDNOG00000038853	RAB5C	98	88.263	ENSPMEG00000012614	-	98	88.584	Poecilia_mexicana
ENSDNOG00000038853	RAB5C	89	93.923	ENSPREG00000022167	-	89	93.443	Poecilia_reticulata
ENSDNOG00000038853	RAB5C	99	88.889	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSDNOG00000038853	RAB5C	100	98.611	ENSPPYG00000008398	RAB5C	100	98.611	Pongo_abelii
ENSDNOG00000038853	RAB5C	100	98.148	ENSPCAG00000016412	RAB5C	100	98.148	Procavia_capensis
ENSDNOG00000038853	RAB5C	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSDNOG00000038853	RAB5C	100	99.074	ENSPVAG00000003867	RAB5C	100	99.074	Pteropus_vampyrus
ENSDNOG00000038853	RAB5C	96	89.573	ENSPNYG00000015851	-	99	89.041	Pundamilia_nyererei
ENSDNOG00000038853	RAB5C	99	87.037	ENSPNYG00000010615	rab5c	98	89.815	Pundamilia_nyererei
ENSDNOG00000038853	RAB5C	99	90.783	ENSPNAG00000028138	rab5c	98	90.783	Pygocentrus_nattereri
ENSDNOG00000038853	RAB5C	97	86.321	ENSPNAG00000002218	-	99	88.679	Pygocentrus_nattereri
ENSDNOG00000038853	RAB5C	100	98.611	ENSRNOG00000018568	Rab5c	100	98.611	Rattus_norvegicus
ENSDNOG00000038853	RAB5C	100	98.611	ENSRBIG00000031376	RAB5C	100	98.611	Rhinopithecus_bieti
ENSDNOG00000038853	RAB5C	100	98.611	ENSRROG00000032895	RAB5C	100	98.611	Rhinopithecus_roxellana
ENSDNOG00000038853	RAB5C	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSDNOG00000038853	RAB5C	100	97.222	ENSSHAG00000005267	-	100	97.222	Sarcophilus_harrisii
ENSDNOG00000038853	RAB5C	99	87.558	ENSSFOG00015009988	-	99	87.558	Scleropages_formosus
ENSDNOG00000038853	RAB5C	96	91.827	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSDNOG00000038853	RAB5C	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSDNOG00000038853	RAB5C	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSDNOG00000038853	RAB5C	100	95.370	ENSSPUG00000012950	-	100	95.370	Sphenodon_punctatus
ENSDNOG00000038853	RAB5C	99	88.889	ENSSPAG00000006436	rab5c	98	91.667	Stegastes_partitus
ENSDNOG00000038853	RAB5C	100	98.611	ENSSSCG00000032467	RAB5C	100	98.611	Sus_scrofa
ENSDNOG00000038853	RAB5C	99	88.426	ENSTRUG00000015590	rab5c	98	90.741	Takifugu_rubripes
ENSDNOG00000038853	RAB5C	96	90.431	ENSTNIG00000011711	rab5c	95	90.431	Tetraodon_nigroviridis
ENSDNOG00000038853	RAB5C	100	98.611	ENSTBEG00000007092	RAB5C	100	98.611	Tupaia_belangeri
ENSDNOG00000038853	RAB5C	100	98.611	ENSTTRG00000006673	RAB5C	100	98.611	Tursiops_truncatus
ENSDNOG00000038853	RAB5C	100	98.611	ENSUAMG00000024343	RAB5C	100	98.611	Ursus_americanus
ENSDNOG00000038853	RAB5C	100	98.611	ENSUMAG00000023270	RAB5C	100	98.611	Ursus_maritimus
ENSDNOG00000038853	RAB5C	96	91.429	ENSXCOG00000006300	-	99	88.235	Xiphophorus_couchianus
ENSDNOG00000038853	RAB5C	99	88.426	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSDNOG00000038853	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus
ENSDNOG00000038853	RAB5C	99	88.889	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus