EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000039160 (Gene tree)
Gene ID: 101420747
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 12542 bases
Position: chrJH564682.1:184828-197369
Accession: 101420747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000031321	PseudoU_synth_2	PF00849.22	8.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000036454	RPUSD3-201	4572	-	ENSDNOP00000031321	378 (aa)	XP_004452728	UPI0003288F8F

Gene Model

Click here to download ENSDNOG00000039160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000039160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000039160	RPUSD3	72	33.449	ENSDNOG00000020026	RPUSD4	71	33.449

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000039160	RPUSD3	92	77.077	ENSG00000156990	RPUSD3	99	77.077	Homo_sapiens
ENSDNOG00000039160	RPUSD3	87	75.455	ENSAMEG00000016227	RPUSD3	94	75.455	Ailuropoda_melanoleuca
ENSDNOG00000039160	RPUSD3	88	45.858	ENSACAG00000009836	RPUSD3	93	45.858	Anolis_carolinensis
ENSDNOG00000039160	RPUSD3	67	54.511	ENSANAG00000007127	-	96	52.709	Aotus_nancymaae
ENSDNOG00000039160	RPUSD3	52	76.020	ENSANAG00000019945	-	78	76.020	Aotus_nancymaae
ENSDNOG00000039160	RPUSD3	50	74.074	ENSANAG00000038118	-	90	74.074	Aotus_nancymaae
ENSDNOG00000039160	RPUSD3	89	77.745	ENSBTAG00000007968	RPUSD3	98	77.745	Bos_taurus
ENSDNOG00000039160	RPUSD3	93	72.934	ENSCAFG00000029733	RPUSD3	99	72.934	Canis_familiaris
ENSDNOG00000039160	RPUSD3	93	72.934	ENSCAFG00020008582	RPUSD3	99	72.934	Canis_lupus_dingo
ENSDNOG00000039160	RPUSD3	90	74.854	ENSCHIG00000026027	RPUSD3	99	74.854	Capra_hircus
ENSDNOG00000039160	RPUSD3	91	70.029	ENSTSYG00000009994	RPUSD3	99	70.029	Carlito_syrichta
ENSDNOG00000039160	RPUSD3	69	75.191	ENSCAPG00000017559	RPUSD3	99	75.191	Cavia_aperea
ENSDNOG00000039160	RPUSD3	89	64.201	ENSCPOG00000037956	RPUSD3	89	64.201	Cavia_porcellus
ENSDNOG00000039160	RPUSD3	87	78.419	ENSCCAG00000029530	RPUSD3	95	77.723	Cebus_capucinus
ENSDNOG00000039160	RPUSD3	92	76.791	ENSCATG00000036939	RPUSD3	99	76.791	Cercocebus_atys
ENSDNOG00000039160	RPUSD3	93	76.286	ENSCSAG00000010506	RPUSD3	99	76.286	Chlorocebus_sabaeus
ENSDNOG00000039160	RPUSD3	68	52.918	ENSCPBG00000008825	RPUSD3	95	52.326	Chrysemys_picta_bellii
ENSDNOG00000039160	RPUSD3	92	75.072	ENSCANG00000040711	RPUSD3	99	75.072	Colobus_angolensis_palliatus
ENSDNOG00000039160	RPUSD3	88	73.273	ENSCGRG00001004923	Rpusd3	91	73.273	Cricetulus_griseus_chok1gshd
ENSDNOG00000039160	RPUSD3	88	73.273	ENSCGRG00000018315	Rpusd3	96	73.273	Cricetulus_griseus_crigri
ENSDNOG00000039160	RPUSD3	69	74.340	ENSDORG00000026827	Rpusd3	92	74.340	Dipodomys_ordii
ENSDNOG00000039160	RPUSD3	93	70.538	ENSETEG00000006538	RPUSD3	100	70.538	Echinops_telfairi
ENSDNOG00000039160	RPUSD3	54	39.320	ENSEBUG00000015605	RPUSD3	67	39.320	Eptatretus_burgeri
ENSDNOG00000039160	RPUSD3	93	74.359	ENSEASG00005014160	RPUSD3	98	74.359	Equus_asinus_asinus
ENSDNOG00000039160	RPUSD3	93	75.499	ENSECAG00000019988	RPUSD3	98	75.499	Equus_caballus
ENSDNOG00000039160	RPUSD3	92	55.398	ENSEEUG00000007353	RPUSD3	99	55.398	Erinaceus_europaeus
ENSDNOG00000039160	RPUSD3	93	74.074	ENSFCAG00000014199	RPUSD3	99	74.074	Felis_catus
ENSDNOG00000039160	RPUSD3	72	48.352	ENSFALG00000012968	RPUSD3	99	48.352	Ficedula_albicollis
ENSDNOG00000039160	RPUSD3	70	76.046	ENSFDAG00000008350	RPUSD3	81	76.046	Fukomys_damarensis
ENSDNOG00000039160	RPUSD3	71	52.963	ENSGAGG00000007493	RPUSD3	82	52.652	Gopherus_agassizii
ENSDNOG00000039160	RPUSD3	92	77.364	ENSGGOG00000013120	RPUSD3	99	77.364	Gorilla_gorilla
ENSDNOG00000039160	RPUSD3	74	74.910	ENSHGLG00000011722	RPUSD3	72	74.910	Heterocephalus_glaber_female
ENSDNOG00000039160	RPUSD3	74	74.910	ENSHGLG00100016038	RPUSD3	72	74.910	Heterocephalus_glaber_male
ENSDNOG00000039160	RPUSD3	93	73.789	ENSSTOG00000002125	RPUSD3	99	73.789	Ictidomys_tridecemlineatus
ENSDNOG00000039160	RPUSD3	87	69.091	ENSJJAG00000012679	Rpusd3	96	69.091	Jaculus_jaculus
ENSDNOG00000039160	RPUSD3	91	77.551	ENSLAFG00000017501	RPUSD3	99	77.551	Loxodonta_africana
ENSDNOG00000039160	RPUSD3	92	76.218	ENSMFAG00000032407	RPUSD3	99	76.218	Macaca_fascicularis
ENSDNOG00000039160	RPUSD3	92	72.206	ENSMMUG00000010628	RPUSD3	96	81.877	Macaca_mulatta
ENSDNOG00000039160	RPUSD3	92	76.218	ENSMNEG00000040308	RPUSD3	99	76.218	Macaca_nemestrina
ENSDNOG00000039160	RPUSD3	92	76.504	ENSMLEG00000033940	RPUSD3	99	76.504	Mandrillus_leucophaeus
ENSDNOG00000039160	RPUSD3	88	73.214	ENSMAUG00000015473	Rpusd3	97	73.214	Mesocricetus_auratus
ENSDNOG00000039160	RPUSD3	91	73.469	ENSMICG00000002315	RPUSD3	99	73.469	Microcebus_murinus
ENSDNOG00000039160	RPUSD3	88	72.537	ENSMOCG00000022613	Rpusd3	97	72.537	Microtus_ochrogaster
ENSDNOG00000039160	RPUSD3	80	59.211	ENSMODG00000005210	RPUSD3	80	58.882	Monodelphis_domestica
ENSDNOG00000039160	RPUSD3	88	71.772	MGP_CAROLIEiJ_G0028725	Rpusd3	97	71.772	Mus_caroli
ENSDNOG00000039160	RPUSD3	91	70.554	ENSMUSG00000051169	Rpusd3	99	70.554	Mus_musculus
ENSDNOG00000039160	RPUSD3	88	72.072	MGP_PahariEiJ_G0022476	Rpusd3	97	72.072	Mus_pahari
ENSDNOG00000039160	RPUSD3	91	70.262	MGP_SPRETEiJ_G0029753	Rpusd3	99	70.262	Mus_spretus
ENSDNOG00000039160	RPUSD3	93	70.940	ENSMPUG00000017132	RPUSD3	99	70.940	Mustela_putorius_furo
ENSDNOG00000039160	RPUSD3	92	77.233	ENSMLUG00000006135	RPUSD3	99	77.233	Myotis_lucifugus
ENSDNOG00000039160	RPUSD3	88	74.251	ENSNGAG00000023704	Rpusd3	97	74.474	Nannospalax_galili
ENSDNOG00000039160	RPUSD3	93	62.571	ENSNLEG00000004214	RPUSD3	95	78.218	Nomascus_leucogenys
ENSDNOG00000039160	RPUSD3	69	62.835	ENSMEUG00000013098	-	100	62.595	Notamacropus_eugenii
ENSDNOG00000039160	RPUSD3	91	59.767	ENSOPRG00000002300	RPUSD3	97	59.767	Ochotona_princeps
ENSDNOG00000039160	RPUSD3	70	74.525	ENSODEG00000018137	RPUSD3	91	74.525	Octodon_degus
ENSDNOG00000039160	RPUSD3	75	51.408	ENSOANG00000012081	-	99	51.408	Ornithorhynchus_anatinus
ENSDNOG00000039160	RPUSD3	89	63.953	ENSOCUG00000027885	RPUSD3	97	63.953	Oryctolagus_cuniculus
ENSDNOG00000039160	RPUSD3	83	77.955	ENSOGAG00000012592	RPUSD3	99	77.955	Otolemur_garnettii
ENSDNOG00000039160	RPUSD3	92	75.645	ENSOARG00000005928	RPUSD3	99	75.645	Ovis_aries
ENSDNOG00000039160	RPUSD3	92	76.791	ENSPPAG00000038083	RPUSD3	99	76.791	Pan_paniscus
ENSDNOG00000039160	RPUSD3	93	74.644	ENSPPRG00000024433	RPUSD3	99	74.644	Panthera_pardus
ENSDNOG00000039160	RPUSD3	91	76.968	ENSPTIG00000006828	RPUSD3	99	76.968	Panthera_tigris_altaica
ENSDNOG00000039160	RPUSD3	92	76.504	ENSPTRG00000051760	RPUSD3	99	76.504	Pan_troglodytes
ENSDNOG00000039160	RPUSD3	93	76.857	ENSPANG00000023885	RPUSD3	99	76.857	Papio_anubis
ENSDNOG00000039160	RPUSD3	88	73.653	ENSPEMG00000017245	Rpusd3	97	73.653	Peromyscus_maniculatus_bairdii
ENSDNOG00000039160	RPUSD3	77	62.543	ENSPCIG00000021901	RPUSD3	85	62.199	Phascolarctos_cinereus
ENSDNOG00000039160	RPUSD3	92	76.791	ENSPPYG00000013676	RPUSD3	99	76.791	Pongo_abelii
ENSDNOG00000039160	RPUSD3	76	59.170	ENSPCAG00000013731	-	100	59.170	Procavia_capensis
ENSDNOG00000039160	RPUSD3	93	77.208	ENSPCOG00000018314	RPUSD3	99	77.208	Propithecus_coquereli
ENSDNOG00000039160	RPUSD3	93	77.208	ENSPVAG00000011107	RPUSD3	99	77.208	Pteropus_vampyrus
ENSDNOG00000039160	RPUSD3	88	67.868	ENSRNOG00000009084	Rpusd3	97	67.868	Rattus_norvegicus
ENSDNOG00000039160	RPUSD3	93	76.571	ENSRBIG00000041230	RPUSD3	99	76.571	Rhinopithecus_bieti
ENSDNOG00000039160	RPUSD3	93	76.571	ENSRROG00000043328	RPUSD3	99	76.571	Rhinopithecus_roxellana
ENSDNOG00000039160	RPUSD3	87	78.354	ENSSBOG00000036106	RPUSD3	94	78.354	Saimiri_boliviensis_boliviensis
ENSDNOG00000039160	RPUSD3	80	58.609	ENSSHAG00000015536	RPUSD3	97	58.278	Sarcophilus_harrisii
ENSDNOG00000039160	RPUSD3	93	74.286	ENSSSCG00000011555	RPUSD3	99	74.286	Sus_scrofa
ENSDNOG00000039160	RPUSD3	62	50.215	ENSTGUG00000008744	RPUSD3	93	49.770	Taeniopygia_guttata
ENSDNOG00000039160	RPUSD3	76	71.626	ENSTBEG00000000176	RPUSD3	100	71.626	Tupaia_belangeri
ENSDNOG00000039160	RPUSD3	93	73.714	ENSTTRG00000007544	RPUSD3	99	73.714	Tursiops_truncatus
ENSDNOG00000039160	RPUSD3	83	77.636	ENSUAMG00000011354	RPUSD3	98	77.636	Ursus_americanus
ENSDNOG00000039160	RPUSD3	93	73.504	ENSUMAG00000018830	RPUSD3	99	73.504	Ursus_maritimus
ENSDNOG00000039160	RPUSD3	91	74.636	ENSVVUG00000023735	RPUSD3	99	74.636	Vulpes_vulpes
ENSDNOG00000039160	RPUSD3	74	48.936	ENSXETG00000023546	rpusd3	99	48.936	Xenopus_tropicalis