EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000040418 (Gene tree)
Gene ID: 101437580
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 170981 bases
Position: chrJH578425.1:975826-1146806
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000030977	CMS1	PF14617.6	5.7e-32	1	1
ENSDNOP00000022587	CMS1	PF14617.6	1.6e-31	1	1
ENSDNOP00000022587	DEAD	PF00270.29	2.2e-07	1	1
ENSDNOP00000030977	DEAD	PF00270.29	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000036814	CMSS1-202	3006	-	ENSDNOP00000022587	276 (aa)	-	UPI0003CBE30D
ENSDNOT00000034610	CMSS1-201	3051	-	ENSDNOP00000030977	291 (aa)	-	UPI0003CBF8C8

Gene Model

Click here to download ENSDNOG00000040418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000040418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000040418	CMSS1	93	84.351	ENSG00000184220	CMSS1	99	91.358	Homo_sapiens
ENSDNOG00000040418	CMSS1	73	63.861	ENSAPOG00000010604	cmss1	94	59.052	Acanthochromis_polyacanthus
ENSDNOG00000040418	CMSS1	92	86.923	ENSAMEG00000004092	CMSS1	100	86.923	Ailuropoda_melanoleuca
ENSDNOG00000040418	CMSS1	73	53.960	ENSACIG00000021854	cmss1	75	53.960	Amphilophus_citrinellus
ENSDNOG00000040418	CMSS1	73	62.871	ENSAOCG00000013361	cmss1	70	62.871	Amphiprion_ocellaris
ENSDNOG00000040418	CMSS1	73	62.871	ENSAPEG00000005829	cmss1	70	62.871	Amphiprion_percula
ENSDNOG00000040418	CMSS1	75	64.563	ENSATEG00000008209	cmss1	80	60.345	Anabas_testudineus
ENSDNOG00000040418	CMSS1	83	68.261	ENSAPLG00000010542	CMSS1	100	68.261	Anas_platyrhynchos
ENSDNOG00000040418	CMSS1	94	59.559	ENSACAG00000011065	CMSS1	99	59.559	Anolis_carolinensis
ENSDNOG00000040418	CMSS1	93	85.496	ENSANAG00000023565	CMSS1	100	85.496	Aotus_nancymaae
ENSDNOG00000040418	CMSS1	73	60.891	ENSACLG00000027294	cmss1	69	60.891	Astatotilapia_calliptera
ENSDNOG00000040418	CMSS1	72	54.000	ENSAMXG00000002046	cmss1	83	48.971	Astyanax_mexicanus
ENSDNOG00000040418	CMSS1	88	85.944	ENSBTAG00000013663	CMSS1	95	85.115	Bos_taurus
ENSDNOG00000040418	CMSS1	95	84.644	ENSCJAG00000000610	CMSS1	100	85.115	Callithrix_jacchus
ENSDNOG00000040418	CMSS1	93	88.550	ENSCAFG00000009230	CMSS1	95	88.550	Canis_familiaris
ENSDNOG00000040418	CMSS1	93	87.739	ENSCAFG00020009464	-	96	87.121	Canis_lupus_dingo
ENSDNOG00000040418	CMSS1	78	86.111	ENSCAFG00020024156	-	68	86.111	Canis_lupus_dingo
ENSDNOG00000040418	CMSS1	93	85.496	ENSCHIG00000013003	CMSS1	95	85.496	Capra_hircus
ENSDNOG00000040418	CMSS1	93	82.824	ENSTSYG00000009266	CMSS1	99	82.692	Carlito_syrichta
ENSDNOG00000040418	CMSS1	81	71.616	ENSCAPG00000013584	CMSS1	100	69.432	Cavia_aperea
ENSDNOG00000040418	CMSS1	92	83.012	ENSCPOG00000014680	CMSS1	94	82.443	Cavia_porcellus
ENSDNOG00000040418	CMSS1	93	86.260	ENSCCAG00000034685	CMSS1	100	86.260	Cebus_capucinus
ENSDNOG00000040418	CMSS1	93	85.496	ENSCATG00000031980	CMSS1	100	85.496	Cercocebus_atys
ENSDNOG00000040418	CMSS1	83	90.393	ENSCLAG00000011241	CMSS1	98	90.393	Chinchilla_lanigera
ENSDNOG00000040418	CMSS1	87	86.939	ENSCSAG00000006024	CMSS1	100	86.939	Chlorocebus_sabaeus
ENSDNOG00000040418	CMSS1	92	70.769	ENSCHOG00000012098	CMSS1	94	70.769	Choloepus_hoffmanni
ENSDNOG00000040418	CMSS1	71	40.500	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSDNOG00000040418	CMSS1	92	85.714	ENSCANG00000031337	CMSS1	99	85.385	Colobus_angolensis_palliatus
ENSDNOG00000040418	CMSS1	91	78.431	ENSCGRG00001014305	Cmss1	92	78.431	Cricetulus_griseus_chok1gshd
ENSDNOG00000040418	CMSS1	91	78.824	ENSCGRG00000006722	Cmss1	99	78.824	Cricetulus_griseus_crigri
ENSDNOG00000040418	CMSS1	73	63.861	ENSCSEG00000004958	cmss1	77	61.135	Cynoglossus_semilaevis
ENSDNOG00000040418	CMSS1	73	60.891	ENSCVAG00000005039	cmss1	79	58.369	Cyprinodon_variegatus
ENSDNOG00000040418	CMSS1	82	52.814	ENSDARG00000112579	cmss1	79	53.017	Danio_rerio
ENSDNOG00000040418	CMSS1	92	83.012	ENSDORG00000010461	Cmss1	94	82.443	Dipodomys_ordii
ENSDNOG00000040418	CMSS1	87	86.250	ENSEASG00005010966	CMSS1	99	89.498	Equus_asinus_asinus
ENSDNOG00000040418	CMSS1	93	83.270	ENSECAG00000015662	CMSS1	99	88.053	Equus_caballus
ENSDNOG00000040418	CMSS1	83	61.404	ENSEEUG00000007624	-	82	61.404	Erinaceus_europaeus
ENSDNOG00000040418	CMSS1	73	62.376	ENSELUG00000019459	cmss1	77	58.442	Esox_lucius
ENSDNOG00000040418	CMSS1	92	89.961	ENSFCAG00000044577	CMSS1	94	89.313	Felis_catus
ENSDNOG00000040418	CMSS1	83	64.629	ENSFALG00000005816	CMSS1	97	64.629	Ficedula_albicollis
ENSDNOG00000040418	CMSS1	83	88.158	ENSFDAG00000012577	CMSS1	100	88.158	Fukomys_damarensis
ENSDNOG00000040418	CMSS1	82	59.307	ENSFHEG00000012008	cmss1	95	59.307	Fundulus_heteroclitus
ENSDNOG00000040418	CMSS1	73	61.386	ENSGMOG00000016729	cmss1	96	53.184	Gadus_morhua
ENSDNOG00000040418	CMSS1	93	61.940	ENSGALG00000015267	CMSS1	100	62.642	Gallus_gallus
ENSDNOG00000040418	CMSS1	75	61.353	ENSGAFG00000021217	cmss1	77	61.881	Gambusia_affinis
ENSDNOG00000040418	CMSS1	73	57.426	ENSGACG00000002798	cmss1	97	50.000	Gasterosteus_aculeatus
ENSDNOG00000040418	CMSS1	95	63.359	ENSGAGG00000019861	CMSS1	99	63.258	Gopherus_agassizii
ENSDNOG00000040418	CMSS1	93	85.551	ENSGGOG00000014125	CMSS1	100	85.496	Gorilla_gorilla
ENSDNOG00000040418	CMSS1	73	60.891	ENSHBUG00000008431	cmss1	71	60.891	Haplochromis_burtoni
ENSDNOG00000040418	CMSS1	90	85.484	ENSHGLG00000019481	CMSS1	100	85.484	Heterocephalus_glaber_female
ENSDNOG00000040418	CMSS1	92	84.980	ENSHGLG00100010314	CMSS1	100	84.980	Heterocephalus_glaber_male
ENSDNOG00000040418	CMSS1	79	62.100	ENSHCOG00000003222	cmss1	74	62.100	Hippocampus_comes
ENSDNOG00000040418	CMSS1	80	55.204	ENSIPUG00000011591	cmss1	76	55.204	Ictalurus_punctatus
ENSDNOG00000040418	CMSS1	92	86.873	ENSSTOG00000019366	CMSS1	94	85.932	Ictidomys_tridecemlineatus
ENSDNOG00000040418	CMSS1	92	81.395	ENSJJAG00000014894	Cmss1	90	88.119	Jaculus_jaculus
ENSDNOG00000040418	CMSS1	73	54.950	ENSKMAG00000002390	cmss1	81	54.950	Kryptolebias_marmoratus
ENSDNOG00000040418	CMSS1	73	57.635	ENSLBEG00000006298	cmss1	83	57.635	Labrus_bergylta
ENSDNOG00000040418	CMSS1	83	65.217	ENSLACG00000009293	CMSS1	100	65.217	Latimeria_chalumnae
ENSDNOG00000040418	CMSS1	82	56.828	ENSLOCG00000009391	cmss1	84	55.462	Lepisosteus_oculatus
ENSDNOG00000040418	CMSS1	83	89.474	ENSLAFG00000017509	CMSS1	100	89.474	Loxodonta_africana
ENSDNOG00000040418	CMSS1	93	85.878	ENSMFAG00000045006	CMSS1	100	85.878	Macaca_fascicularis
ENSDNOG00000040418	CMSS1	96	83.704	ENSMMUG00000002939	CMSS1	98	89.545	Macaca_mulatta
ENSDNOG00000040418	CMSS1	93	85.496	ENSMNEG00000031315	CMSS1	100	85.496	Macaca_nemestrina
ENSDNOG00000040418	CMSS1	93	85.115	ENSMLEG00000033660	CMSS1	100	85.115	Mandrillus_leucophaeus
ENSDNOG00000040418	CMSS1	73	63.861	ENSMAMG00000017176	cmss1	70	63.861	Mastacembelus_armatus
ENSDNOG00000040418	CMSS1	73	60.891	ENSMZEG00005021886	cmss1	69	60.891	Maylandia_zebra
ENSDNOG00000040418	CMSS1	83	67.105	ENSMGAG00000014360	CMSS1	100	67.105	Meleagris_gallopavo
ENSDNOG00000040418	CMSS1	91	55.814	ENSMAUG00000020609	Cmss1	92	53.846	Mesocricetus_auratus
ENSDNOG00000040418	CMSS1	92	86.100	ENSMICG00000048977	CMSS1	99	86.100	Microcebus_murinus
ENSDNOG00000040418	CMSS1	92	80.859	ENSMOCG00000021937	Cmss1	94	80.309	Microtus_ochrogaster
ENSDNOG00000040418	CMSS1	73	62.376	ENSMMOG00000019794	cmss1	84	62.376	Mola_mola
ENSDNOG00000040418	CMSS1	93	73.563	ENSMODG00000002275	CMSS1	100	73.208	Monodelphis_domestica
ENSDNOG00000040418	CMSS1	73	64.851	ENSMALG00000004250	cmss1	69	64.851	Monopterus_albus
ENSDNOG00000040418	CMSS1	92	80.545	MGP_CAROLIEiJ_G0020824	Cmss1	94	80.000	Mus_caroli
ENSDNOG00000040418	CMSS1	92	81.712	ENSMUSG00000022748	Cmss1	94	81.154	Mus_musculus
ENSDNOG00000040418	CMSS1	92	79.767	MGP_PahariEiJ_G0016524	Cmss1	93	79.767	Mus_pahari
ENSDNOG00000040418	CMSS1	92	81.712	MGP_SPRETEiJ_G0021724	Cmss1	94	81.154	Mus_spretus
ENSDNOG00000040418	CMSS1	87	90.164	ENSMPUG00000011324	CMSS1	100	88.506	Mustela_putorius_furo
ENSDNOG00000040418	CMSS1	92	87.405	ENSMLUG00000001131	CMSS1	99	87.786	Myotis_lucifugus
ENSDNOG00000040418	CMSS1	92	82.625	ENSNGAG00000020316	Cmss1	94	82.443	Nannospalax_galili
ENSDNOG00000040418	CMSS1	73	60.396	ENSNBRG00000003095	cmss1	69	60.396	Neolamprologus_brichardi
ENSDNOG00000040418	CMSS1	92	87.645	ENSNLEG00000034172	CMSS1	100	86.641	Nomascus_leucogenys
ENSDNOG00000040418	CMSS1	83	65.789	ENSMEUG00000014505	CMSS1	100	65.789	Notamacropus_eugenii
ENSDNOG00000040418	CMSS1	92	86.434	ENSOPRG00000002986	CMSS1	94	85.496	Ochotona_princeps
ENSDNOG00000040418	CMSS1	92	71.154	ENSODEG00000001853	-	94	70.992	Octodon_degus
ENSDNOG00000040418	CMSS1	92	83.398	ENSODEG00000005226	-	94	82.824	Octodon_degus
ENSDNOG00000040418	CMSS1	79	77.523	ENSODEG00000009446	-	85	77.523	Octodon_degus
ENSDNOG00000040418	CMSS1	90	81.452	ENSODEG00000003558	-	90	81.452	Octodon_degus
ENSDNOG00000040418	CMSS1	73	61.386	ENSONIG00000006678	cmss1	77	61.386	Oreochromis_niloticus
ENSDNOG00000040418	CMSS1	91	71.595	ENSOANG00000007529	CMSS1	100	73.391	Ornithorhynchus_anatinus
ENSDNOG00000040418	CMSS1	95	85.338	ENSOCUG00000025366	CMSS1	96	85.338	Oryctolagus_cuniculus
ENSDNOG00000040418	CMSS1	73	64.356	ENSORLG00000020340	cmss1	78	60.262	Oryzias_latipes
ENSDNOG00000040418	CMSS1	83	54.148	ENSORLG00020012235	cmss1	85	57.921	Oryzias_latipes_hni
ENSDNOG00000040418	CMSS1	73	57.921	ENSORLG00015015551	cmss1	75	57.921	Oryzias_latipes_hsok
ENSDNOG00000040418	CMSS1	73	63.366	ENSOMEG00000012555	cmss1	84	59.016	Oryzias_melastigma
ENSDNOG00000040418	CMSS1	83	89.035	ENSOGAG00000002045	CMSS1	100	89.035	Otolemur_garnettii
ENSDNOG00000040418	CMSS1	94	84.211	ENSOARG00000017899	CMSS1	91	84.211	Ovis_aries
ENSDNOG00000040418	CMSS1	93	85.824	ENSPPAG00000038515	CMSS1	96	85.824	Pan_paniscus
ENSDNOG00000040418	CMSS1	92	88.803	ENSPPRG00000016767	CMSS1	94	88.168	Panthera_pardus
ENSDNOG00000040418	CMSS1	92	88.417	ENSPTIG00000018274	CMSS1	94	87.786	Panthera_tigris_altaica
ENSDNOG00000040418	CMSS1	93	84.733	ENSPTRG00000015157	CMSS1	100	86.531	Pan_troglodytes
ENSDNOG00000040418	CMSS1	92	86.614	ENSPANG00000019980	CMSS1	99	86.614	Papio_anubis
ENSDNOG00000040418	CMSS1	82	60.870	ENSPKIG00000012609	cmss1	88	60.084	Paramormyrops_kingsleyae
ENSDNOG00000040418	CMSS1	83	71.179	ENSPSIG00000003849	CMSS1	100	71.179	Pelodiscus_sinensis
ENSDNOG00000040418	CMSS1	73	62.069	ENSPMGG00000010286	cmss1	87	62.069	Periophthalmus_magnuspinnatus
ENSDNOG00000040418	CMSS1	92	79.923	ENSPEMG00000016384	Cmss1	93	79.389	Peromyscus_maniculatus_bairdii
ENSDNOG00000040418	CMSS1	74	54.412	ENSPMAG00000001146	cmss1	99	54.950	Petromyzon_marinus
ENSDNOG00000040418	CMSS1	92	72.624	ENSPCIG00000015656	CMSS1	99	72.624	Phascolarctos_cinereus
ENSDNOG00000040418	CMSS1	73	62.376	ENSPFOG00000016849	cmss1	71	62.376	Poecilia_formosa
ENSDNOG00000040418	CMSS1	73	61.881	ENSPLAG00000008323	cmss1	71	61.881	Poecilia_latipinna
ENSDNOG00000040418	CMSS1	73	62.376	ENSPMEG00000021020	cmss1	70	62.376	Poecilia_mexicana
ENSDNOG00000040418	CMSS1	82	58.190	ENSPREG00000007618	cmss1	69	61.386	Poecilia_reticulata
ENSDNOG00000040418	CMSS1	92	86.100	ENSPPYG00000013606	CMSS1	95	86.100	Pongo_abelii
ENSDNOG00000040418	CMSS1	94	85.338	ENSPCOG00000020035	CMSS1	99	86.873	Propithecus_coquereli
ENSDNOG00000040418	CMSS1	96	72.694	ENSPVAG00000017031	CMSS1	97	72.694	Pteropus_vampyrus
ENSDNOG00000040418	CMSS1	64	62.500	ENSPNYG00000013428	cmss1	65	62.500	Pundamilia_nyererei
ENSDNOG00000040418	CMSS1	88	51.417	ENSPNAG00000007912	cmss1	84	52.227	Pygocentrus_nattereri
ENSDNOG00000040418	CMSS1	92	80.233	ENSRNOG00000027888	Cmss1	100	80.620	Rattus_norvegicus
ENSDNOG00000040418	CMSS1	93	83.969	ENSRBIG00000037931	CMSS1	100	83.969	Rhinopithecus_bieti
ENSDNOG00000040418	CMSS1	93	83.969	ENSRROG00000042910	CMSS1	100	83.969	Rhinopithecus_roxellana
ENSDNOG00000040418	CMSS1	93	84.733	ENSSBOG00000030980	CMSS1	99	85.385	Saimiri_boliviensis_boliviensis
ENSDNOG00000040418	CMSS1	88	74.900	ENSSHAG00000009321	CMSS1	99	74.900	Sarcophilus_harrisii
ENSDNOG00000040418	CMSS1	82	62.174	ENSSFOG00015001509	cmss1	81	61.702	Scleropages_formosus
ENSDNOG00000040418	CMSS1	94	55.212	ENSSMAG00000001653	cmss1	84	55.212	Scophthalmus_maximus
ENSDNOG00000040418	CMSS1	82	61.135	ENSSDUG00000007719	cmss1	84	59.336	Seriola_dumerili
ENSDNOG00000040418	CMSS1	75	64.734	ENSSLDG00000012300	cmss1	80	57.292	Seriola_lalandi_dorsalis
ENSDNOG00000040418	CMSS1	92	70.656	ENSSARG00000003584	CMSS1	93	70.229	Sorex_araneus
ENSDNOG00000040418	CMSS1	82	70.796	ENSSPUG00000003865	CMSS1	100	70.796	Sphenodon_punctatus
ENSDNOG00000040418	CMSS1	75	64.078	ENSSPAG00000019182	cmss1	63	64.356	Stegastes_partitus
ENSDNOG00000040418	CMSS1	96	84.502	ENSSSCG00000011970	CMSS1	97	84.502	Sus_scrofa
ENSDNOG00000040418	CMSS1	83	64.192	ENSTGUG00000013635	CMSS1	100	64.192	Taeniopygia_guttata
ENSDNOG00000040418	CMSS1	73	61.881	ENSTRUG00000015265	cmss1	72	61.881	Takifugu_rubripes
ENSDNOG00000040418	CMSS1	73	54.950	ENSTNIG00000002880	cmss1	87	50.417	Tetraodon_nigroviridis
ENSDNOG00000040418	CMSS1	83	66.667	ENSTBEG00000016722	CMSS1	81	66.667	Tupaia_belangeri
ENSDNOG00000040418	CMSS1	92	84.170	ENSTTRG00000001562	CMSS1	93	83.588	Tursiops_truncatus
ENSDNOG00000040418	CMSS1	92	88.077	ENSUAMG00000024209	CMSS1	100	91.928	Ursus_americanus
ENSDNOG00000040418	CMSS1	95	86.090	ENSUMAG00000001983	CMSS1	99	87.259	Ursus_maritimus
ENSDNOG00000040418	CMSS1	83	73.246	ENSVPAG00000000263	CMSS1	82	73.246	Vicugna_pacos
ENSDNOG00000040418	CMSS1	87	88.211	ENSVVUG00000021647	-	100	88.211	Vulpes_vulpes
ENSDNOG00000040418	CMSS1	78	92.593	ENSVVUG00000007776	-	85	92.593	Vulpes_vulpes
ENSDNOG00000040418	CMSS1	93	57.308	ENSXETG00000011858	cmss1	92	57.308	Xenopus_tropicalis
ENSDNOG00000040418	CMSS1	75	61.538	ENSXCOG00000018724	cmss1	69	62.376	Xiphophorus_couchianus
ENSDNOG00000040418	CMSS1	75	61.538	ENSXMAG00000011243	cmss1	76	62.376	Xiphophorus_maculatus