EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000042234 (Gene tree)
Gene ID: 101420999
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 1856 bases
Position: chrJH582061.1:1566521-1568376
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000021120	Exo_endo_phos	PF03372.23	6.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000048473	APEX1-201	1001	-	ENSDNOP00000021120	328 (aa)	-	UPI0003CC0922

Gene Model

Click here to download ENSDNOG00000042234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000042234's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000042234	APEX1	95	89.308	ENSG00000100823	APEX1	99	92.353	Homo_sapiens
ENSDNOG00000042234	APEX1	83	65.950	ENSAPOG00000017002	apex1	91	65.950	Acanthochromis_polyacanthus
ENSDNOG00000042234	APEX1	95	91.509	ENSAMEG00000005418	APEX1	100	91.509	Ailuropoda_melanoleuca
ENSDNOG00000042234	APEX1	82	67.754	ENSACIG00000010653	apex1	94	67.384	Amphilophus_citrinellus
ENSDNOG00000042234	APEX1	83	65.591	ENSAOCG00000009649	apex1	90	65.591	Amphiprion_ocellaris
ENSDNOG00000042234	APEX1	83	65.591	ENSAPEG00000021453	apex1	90	65.591	Amphiprion_percula
ENSDNOG00000042234	APEX1	81	68.000	ENSATEG00000002883	apex1	97	63.291	Anabas_testudineus
ENSDNOG00000042234	APEX1	95	66.460	ENSACAG00000008099	APEX1	100	66.460	Anolis_carolinensis
ENSDNOG00000042234	APEX1	95	90.252	ENSANAG00000030117	APEX1	100	90.252	Aotus_nancymaae
ENSDNOG00000042234	APEX1	82	67.754	ENSACLG00000018441	apex1	99	62.975	Astatotilapia_calliptera
ENSDNOG00000042234	APEX1	95	62.813	ENSAMXG00000034699	apex1	100	61.562	Astyanax_mexicanus
ENSDNOG00000042234	APEX1	95	90.252	ENSBTAG00000002745	APEX1	100	90.252	Bos_taurus
ENSDNOG00000042234	APEX1	74	39.921	WBGene00001372	exo-3	87	39.921	Caenorhabditis_elegans
ENSDNOG00000042234	APEX1	95	90.252	ENSCJAG00000009726	APEX1	100	90.252	Callithrix_jacchus
ENSDNOG00000042234	APEX1	95	89.308	ENSCAFG00000032033	APEX1	100	89.308	Canis_familiaris
ENSDNOG00000042234	APEX1	52	88.953	ENSCAFG00020023002	-	96	88.953	Canis_lupus_dingo
ENSDNOG00000042234	APEX1	95	89.308	ENSCAFG00020014377	-	100	89.308	Canis_lupus_dingo
ENSDNOG00000042234	APEX1	93	72.115	ENSCHIG00000014537	-	99	72.115	Capra_hircus
ENSDNOG00000042234	APEX1	95	89.623	ENSCHIG00000007298	-	100	89.623	Capra_hircus
ENSDNOG00000042234	APEX1	95	89.623	ENSTSYG00000034813	APEX1	100	89.623	Carlito_syrichta
ENSDNOG00000042234	APEX1	80	83.026	ENSCAPG00000016235	APEX1	91	90.678	Cavia_aperea
ENSDNOG00000042234	APEX1	95	89.623	ENSCPOG00000030909	APEX1	100	89.623	Cavia_porcellus
ENSDNOG00000042234	APEX1	95	77.358	ENSCCAG00000031931	-	100	77.358	Cebus_capucinus
ENSDNOG00000042234	APEX1	95	90.252	ENSCCAG00000033056	-	100	90.252	Cebus_capucinus
ENSDNOG00000042234	APEX1	95	89.308	ENSCATG00000015580	APEX1	100	89.308	Cercocebus_atys
ENSDNOG00000042234	APEX1	95	89.937	ENSCLAG00000001002	APEX1	100	89.937	Chinchilla_lanigera
ENSDNOG00000042234	APEX1	95	88.994	ENSCSAG00000016670	-	100	88.994	Chlorocebus_sabaeus
ENSDNOG00000042234	APEX1	95	88.994	ENSCSAG00000016685	-	100	88.994	Chlorocebus_sabaeus
ENSDNOG00000042234	APEX1	95	66.771	ENSCPBG00000009567	APEX1	100	66.771	Chrysemys_picta_bellii
ENSDNOG00000042234	APEX1	85	51.864	ENSCING00000008137	-	84	55.094	Ciona_intestinalis
ENSDNOG00000042234	APEX1	94	45.687	ENSCSAVG00000007144	-	100	50.000	Ciona_savignyi
ENSDNOG00000042234	APEX1	95	89.308	ENSCANG00000030726	APEX1	100	89.308	Colobus_angolensis_palliatus
ENSDNOG00000042234	APEX1	95	87.421	ENSCGRG00001017046	Apex1	100	87.421	Cricetulus_griseus_chok1gshd
ENSDNOG00000042234	APEX1	95	87.421	ENSCGRG00000008984	Apex1	100	87.421	Cricetulus_griseus_crigri
ENSDNOG00000042234	APEX1	94	61.514	ENSCSEG00000017499	apex1	99	61.006	Cynoglossus_semilaevis
ENSDNOG00000042234	APEX1	94	63.291	ENSCVAG00000022075	apex1	99	63.291	Cyprinodon_variegatus
ENSDNOG00000042234	APEX1	95	62.264	ENSDARG00000045843	apex1	100	62.264	Danio_rerio
ENSDNOG00000042234	APEX1	95	89.937	ENSDORG00000001616	Apex1	100	89.937	Dipodomys_ordii
ENSDNOG00000042234	APEX1	95	90.252	ENSETEG00000004855	-	100	90.252	Echinops_telfairi
ENSDNOG00000042234	APEX1	70	60.251	ENSEBUG00000000622	-	92	60.251	Eptatretus_burgeri
ENSDNOG00000042234	APEX1	100	89.881	ENSEASG00005017489	APEX1	78	89.881	Equus_asinus_asinus
ENSDNOG00000042234	APEX1	100	89.881	ENSECAG00000022325	APEX1	86	89.881	Equus_caballus
ENSDNOG00000042234	APEX1	85	88.194	ENSEEUG00000012569	APEX1	100	88.194	Erinaceus_europaeus
ENSDNOG00000042234	APEX1	95	62.579	ENSELUG00000021706	apex1	100	63.522	Esox_lucius
ENSDNOG00000042234	APEX1	100	88.690	ENSFCAG00000030869	APEX1	100	91.195	Felis_catus
ENSDNOG00000042234	APEX1	95	89.623	ENSFDAG00000006120	APEX1	100	89.623	Fukomys_damarensis
ENSDNOG00000042234	APEX1	94	64.241	ENSFHEG00000009031	apex1	83	64.241	Fundulus_heteroclitus
ENSDNOG00000042234	APEX1	94	58.544	ENSGMOG00000007943	apex1	99	58.228	Gadus_morhua
ENSDNOG00000042234	APEX1	83	68.817	ENSGAFG00000005311	apex1	99	63.924	Gambusia_affinis
ENSDNOG00000042234	APEX1	94	61.709	ENSGACG00000019497	apex1	99	65.789	Gasterosteus_aculeatus
ENSDNOG00000042234	APEX1	95	66.144	ENSGAGG00000014999	APEX1	100	66.144	Gopherus_agassizii
ENSDNOG00000042234	APEX1	95	89.623	ENSGGOG00000002128	APEX1	100	89.623	Gorilla_gorilla
ENSDNOG00000042234	APEX1	94	62.342	ENSHBUG00000005894	apex1	99	62.975	Haplochromis_burtoni
ENSDNOG00000042234	APEX1	95	89.937	ENSHGLG00000002848	APEX1	100	89.937	Heterocephalus_glaber_female
ENSDNOG00000042234	APEX1	95	89.937	ENSHGLG00100017878	APEX1	100	89.937	Heterocephalus_glaber_male
ENSDNOG00000042234	APEX1	94	63.208	ENSHCOG00000009961	apex1	99	62.264	Hippocampus_comes
ENSDNOG00000042234	APEX1	95	65.517	ENSIPUG00000005799	apex1	100	64.577	Ictalurus_punctatus
ENSDNOG00000042234	APEX1	95	89.623	ENSSTOG00000010096	APEX1	100	89.623	Ictidomys_tridecemlineatus
ENSDNOG00000042234	APEX1	95	88.994	ENSJJAG00000012067	-	100	88.994	Jaculus_jaculus
ENSDNOG00000042234	APEX1	88	79.866	ENSJJAG00000020465	-	96	79.866	Jaculus_jaculus
ENSDNOG00000042234	APEX1	95	79.874	ENSJJAG00000003660	-	100	79.874	Jaculus_jaculus
ENSDNOG00000042234	APEX1	94	63.291	ENSKMAG00000021171	apex1	99	63.291	Kryptolebias_marmoratus
ENSDNOG00000042234	APEX1	83	64.516	ENSLBEG00000010248	apex1	99	60.568	Labrus_bergylta
ENSDNOG00000042234	APEX1	95	63.750	ENSLACG00000008617	APEX1	100	63.836	Latimeria_chalumnae
ENSDNOG00000042234	APEX1	95	63.043	ENSLOCG00000015516	apex1	99	62.893	Lepisosteus_oculatus
ENSDNOG00000042234	APEX1	95	89.937	ENSLAFG00000021872	APEX1	100	89.937	Loxodonta_africana
ENSDNOG00000042234	APEX1	95	89.308	ENSMFAG00000002565	APEX1	100	89.308	Macaca_fascicularis
ENSDNOG00000042234	APEX1	95	89.308	ENSMMUG00000048039	APEX1	100	89.308	Macaca_mulatta
ENSDNOG00000042234	APEX1	95	89.308	ENSMNEG00000036944	APEX1	100	89.308	Macaca_nemestrina
ENSDNOG00000042234	APEX1	95	89.308	ENSMLEG00000042125	APEX1	100	89.308	Mandrillus_leucophaeus
ENSDNOG00000042234	APEX1	94	63.291	ENSMAMG00000023526	apex1	99	63.722	Mastacembelus_armatus
ENSDNOG00000042234	APEX1	82	67.754	ENSMZEG00005014187	apex1	99	62.975	Maylandia_zebra
ENSDNOG00000042234	APEX1	95	88.365	ENSMAUG00000013994	Apex1	100	88.365	Mesocricetus_auratus
ENSDNOG00000042234	APEX1	95	91.509	ENSMICG00000043554	APEX1	100	91.509	Microcebus_murinus
ENSDNOG00000042234	APEX1	95	88.365	ENSMOCG00000013721	Apex1	100	88.365	Microtus_ochrogaster
ENSDNOG00000042234	APEX1	83	63.929	ENSMMOG00000010031	apex1	97	60.063	Mola_mola
ENSDNOG00000042234	APEX1	95	80.312	ENSMODG00000007125	APEX1	100	80.938	Monodelphis_domestica
ENSDNOG00000042234	APEX1	83	62.132	ENSMALG00000011699	apex1	75	62.132	Monopterus_albus
ENSDNOG00000042234	APEX1	94	89.590	MGP_CAROLIEiJ_G0019209	Apex1	100	91.011	Mus_caroli
ENSDNOG00000042234	APEX1	95	90.252	ENSMUSG00000035960	Apex1	100	92.093	Mus_musculus
ENSDNOG00000042234	APEX1	95	89.623	MGP_PahariEiJ_G0030232	Apex1	100	89.888	Mus_pahari
ENSDNOG00000042234	APEX1	95	90.252	MGP_SPRETEiJ_G0020101	Apex1	100	90.449	Mus_spretus
ENSDNOG00000042234	APEX1	95	90.625	ENSMLUG00000028957	APEX1	100	90.625	Myotis_lucifugus
ENSDNOG00000042234	APEX1	91	68.182	ENSNGAG00000021748	-	95	68.182	Nannospalax_galili
ENSDNOG00000042234	APEX1	95	89.937	ENSNGAG00000002725	-	100	89.937	Nannospalax_galili
ENSDNOG00000042234	APEX1	82	67.391	ENSNBRG00000005334	apex1	91	62.658	Neolamprologus_brichardi
ENSDNOG00000042234	APEX1	95	89.937	ENSNLEG00000010839	APEX1	100	89.937	Nomascus_leucogenys
ENSDNOG00000042234	APEX1	95	82.390	ENSMEUG00000014519	APEX1	100	81.191	Notamacropus_eugenii
ENSDNOG00000042234	APEX1	95	88.679	ENSOPRG00000014029	APEX1	100	88.365	Ochotona_princeps
ENSDNOG00000042234	APEX1	92	72.168	ENSODEG00000004777	-	99	72.168	Octodon_degus
ENSDNOG00000042234	APEX1	95	67.593	ENSODEG00000006583	-	100	67.593	Octodon_degus
ENSDNOG00000042234	APEX1	95	90.566	ENSODEG00000001703	-	100	90.566	Octodon_degus
ENSDNOG00000042234	APEX1	82	67.626	ENSONIG00000012089	apex1	99	63.291	Oreochromis_niloticus
ENSDNOG00000042234	APEX1	100	71.053	ENSOANG00000008836	APEX1	85	71.930	Ornithorhynchus_anatinus
ENSDNOG00000042234	APEX1	95	89.937	ENSOCUG00000005022	APEX1	100	89.937	Oryctolagus_cuniculus
ENSDNOG00000042234	APEX1	94	63.522	ENSORLG00000012378	apex1	99	63.522	Oryzias_latipes
ENSDNOG00000042234	APEX1	94	63.522	ENSORLG00020021371	apex1	99	63.522	Oryzias_latipes_hni
ENSDNOG00000042234	APEX1	94	63.522	ENSORLG00015020089	apex1	99	63.522	Oryzias_latipes_hsok
ENSDNOG00000042234	APEX1	94	63.208	ENSOMEG00000018876	apex1	99	63.208	Oryzias_melastigma
ENSDNOG00000042234	APEX1	95	91.195	ENSOGAG00000013335	-	100	91.195	Otolemur_garnettii
ENSDNOG00000042234	APEX1	93	79.808	ENSOGAG00000029355	-	100	79.808	Otolemur_garnettii
ENSDNOG00000042234	APEX1	94	76.266	ENSOARG00000014424	-	100	75.949	Ovis_aries
ENSDNOG00000042234	APEX1	91	86.364	ENSOARG00000001876	-	100	86.364	Ovis_aries
ENSDNOG00000042234	APEX1	95	88.679	ENSOARG00000019740	-	100	88.679	Ovis_aries
ENSDNOG00000042234	APEX1	95	89.623	ENSPPAG00000038760	APEX1	100	89.623	Pan_paniscus
ENSDNOG00000042234	APEX1	95	90.881	ENSPPRG00000011794	APEX1	100	90.881	Panthera_pardus
ENSDNOG00000042234	APEX1	95	91.195	ENSPTIG00000014829	APEX1	100	91.195	Panthera_tigris_altaica
ENSDNOG00000042234	APEX1	95	89.623	ENSPTRG00000006093	APEX1	100	89.623	Pan_troglodytes
ENSDNOG00000042234	APEX1	95	89.308	ENSPANG00000022757	APEX1	100	89.308	Papio_anubis
ENSDNOG00000042234	APEX1	82	65.580	ENSPKIG00000003504	apex1	100	60.748	Paramormyrops_kingsleyae
ENSDNOG00000042234	APEX1	71	63.786	ENSPMGG00000016596	apex1	73	63.786	Periophthalmus_magnuspinnatus
ENSDNOG00000042234	APEX1	95	90.252	ENSPEMG00000019097	Apex1	100	90.252	Peromyscus_maniculatus_bairdii
ENSDNOG00000042234	APEX1	89	61.333	ENSPMAG00000007275	-	95	62.633	Petromyzon_marinus
ENSDNOG00000042234	APEX1	95	80.251	ENSPCIG00000023274	APEX1	100	81.931	Phascolarctos_cinereus
ENSDNOG00000042234	APEX1	83	69.176	ENSPFOG00000004178	apex1	99	64.353	Poecilia_formosa
ENSDNOG00000042234	APEX1	83	68.817	ENSPLAG00000012779	apex1	99	64.038	Poecilia_latipinna
ENSDNOG00000042234	APEX1	83	69.176	ENSPMEG00000019623	apex1	99	64.353	Poecilia_mexicana
ENSDNOG00000042234	APEX1	83	69.176	ENSPREG00000014298	apex1	99	64.353	Poecilia_reticulata
ENSDNOG00000042234	APEX1	95	89.308	ENSPPYG00000005565	APEX1	100	89.308	Pongo_abelii
ENSDNOG00000042234	APEX1	95	89.274	ENSPCAG00000010376	APEX1	100	89.274	Procavia_capensis
ENSDNOG00000042234	APEX1	95	91.509	ENSPCOG00000021564	APEX1	100	91.509	Propithecus_coquereli
ENSDNOG00000042234	APEX1	95	90.625	ENSPVAG00000010736	APEX1	100	90.625	Pteropus_vampyrus
ENSDNOG00000042234	APEX1	82	67.754	ENSPNYG00000023940	apex1	99	62.975	Pundamilia_nyererei
ENSDNOG00000042234	APEX1	88	62.500	ENSPNAG00000020897	apex1	96	61.356	Pygocentrus_nattereri
ENSDNOG00000042234	APEX1	95	89.308	ENSRNOG00000009663	Apex1	100	89.308	Rattus_norvegicus
ENSDNOG00000042234	APEX1	95	89.308	ENSRBIG00000038325	APEX1	99	89.308	Rhinopithecus_bieti
ENSDNOG00000042234	APEX1	95	89.937	ENSSBOG00000018921	-	100	89.937	Saimiri_boliviensis_boliviensis
ENSDNOG00000042234	APEX1	95	75.472	ENSSBOG00000031372	-	100	75.873	Saimiri_boliviensis_boliviensis
ENSDNOG00000042234	APEX1	95	79.321	ENSSHAG00000013524	APEX1	100	79.321	Sarcophilus_harrisii
ENSDNOG00000042234	APEX1	95	59.748	ENSSFOG00015001948	apex1	100	59.119	Scleropages_formosus
ENSDNOG00000042234	APEX1	82	66.304	ENSSMAG00000013348	apex1	99	62.776	Scophthalmus_maximus
ENSDNOG00000042234	APEX1	94	62.025	ENSSDUG00000016377	apex1	99	62.025	Seriola_dumerili
ENSDNOG00000042234	APEX1	94	62.342	ENSSLDG00000023005	apex1	99	62.342	Seriola_lalandi_dorsalis
ENSDNOG00000042234	APEX1	88	68.166	ENSSPUG00000000531	APEX1	95	70.036	Sphenodon_punctatus
ENSDNOG00000042234	APEX1	94	62.025	ENSSPAG00000000458	apex1	99	62.025	Stegastes_partitus
ENSDNOG00000042234	APEX1	95	89.937	ENSSSCG00000040060	-	100	89.937	Sus_scrofa
ENSDNOG00000042234	APEX1	90	52.769	ENSSSCG00000039705	-	96	52.769	Sus_scrofa
ENSDNOG00000042234	APEX1	70	56.780	ENSTGUG00000014378	APEX1	100	56.780	Taeniopygia_guttata
ENSDNOG00000042234	APEX1	82	64.493	ENSTRUG00000004268	apex1	95	60.443	Takifugu_rubripes
ENSDNOG00000042234	APEX1	94	60.759	ENSTNIG00000005778	apex1	99	60.759	Tetraodon_nigroviridis
ENSDNOG00000042234	APEX1	95	85.849	ENSTBEG00000006405	APEX1	100	85.849	Tupaia_belangeri
ENSDNOG00000042234	APEX1	70	90.254	ENSTTRG00000007860	APEX1	100	90.254	Tursiops_truncatus
ENSDNOG00000042234	APEX1	95	91.195	ENSUAMG00000010457	APEX1	100	91.195	Ursus_americanus
ENSDNOG00000042234	APEX1	95	91.195	ENSUMAG00000009178	APEX1	100	91.195	Ursus_maritimus
ENSDNOG00000042234	APEX1	70	84.322	ENSVPAG00000005083	APEX1	100	84.322	Vicugna_pacos
ENSDNOG00000042234	APEX1	95	89.623	ENSVVUG00000009010	APEX1	100	89.623	Vulpes_vulpes
ENSDNOG00000042234	APEX1	95	63.240	ENSXETG00000024773	apex1	100	63.240	Xenopus_tropicalis
ENSDNOG00000042234	APEX1	83	68.817	ENSXCOG00000015233	apex1	99	64.241	Xiphophorus_couchianus
ENSDNOG00000042234	APEX1	83	68.817	ENSXMAG00000006195	apex1	99	64.241	Xiphophorus_maculatus