EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000043654 (Gene tree)
Gene ID: -
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 26336 bases
Position: chrJH570730.1:400367-426702
Accession: 2324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000021223	CPSF_A	PF03178.15	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000047033	CPSF1-201	3024	-	ENSDNOP00000021223	982 (aa)	-	UPI0003CBEF79

Gene Model

Click here to download ENSDNOG00000043654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000043654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000043654	CPSF1	94	95.942	ENSG00000071894	CPSF1	57	95.942	Homo_sapiens
ENSDNOG00000043654	CPSF1	94	82.370	ENSAPOG00000019621	cpsf1	57	82.659	Acanthochromis_polyacanthus
ENSDNOG00000043654	CPSF1	89	97.101	ENSAMEG00000005557	CPSF1	67	97.101	Ailuropoda_melanoleuca
ENSDNOG00000043654	CPSF1	94	77.457	ENSACIG00000006112	cpsf1	56	78.322	Amphilophus_citrinellus
ENSDNOG00000043654	CPSF1	94	81.792	ENSAOCG00000007120	cpsf1	57	82.081	Amphiprion_ocellaris
ENSDNOG00000043654	CPSF1	94	81.792	ENSAPEG00000005755	cpsf1	57	82.081	Amphiprion_percula
ENSDNOG00000043654	CPSF1	94	81.503	ENSATEG00000011097	cpsf1	57	81.792	Anabas_testudineus
ENSDNOG00000043654	CPSF1	94	70.690	ENSACAG00000009655	CPSF1	61	82.639	Anolis_carolinensis
ENSDNOG00000043654	CPSF1	94	95.652	ENSANAG00000036514	CPSF1	57	95.652	Aotus_nancymaae
ENSDNOG00000043654	CPSF1	94	82.659	ENSACLG00000012231	cpsf1	57	82.659	Astatotilapia_calliptera
ENSDNOG00000043654	CPSF1	94	82.609	ENSAMXG00000008485	cpsf1	54	82.609	Astyanax_mexicanus
ENSDNOG00000043654	CPSF1	94	95.652	ENSBTAG00000008355	CPSF1	56	95.652	Bos_taurus
ENSDNOG00000043654	CPSF1	65	31.880	WBGene00022301	cpsf-1	54	31.608	Caenorhabditis_elegans
ENSDNOG00000043654	CPSF1	94	95.942	ENSCJAG00000021421	CPSF1	59	95.942	Callithrix_jacchus
ENSDNOG00000043654	CPSF1	89	96.812	ENSCAFG00000001600	CPSF1	67	96.812	Canis_familiaris
ENSDNOG00000043654	CPSF1	94	96.812	ENSCAFG00020020821	CPSF1	68	96.812	Canis_lupus_dingo
ENSDNOG00000043654	CPSF1	94	88.728	ENSCHIG00000015833	CPSF1	58	93.357	Capra_hircus
ENSDNOG00000043654	CPSF1	94	96.812	ENSTSYG00000028560	CPSF1	68	96.812	Carlito_syrichta
ENSDNOG00000043654	CPSF1	85	95.942	ENSCAPG00000014921	CPSF1	51	95.942	Cavia_aperea
ENSDNOG00000043654	CPSF1	94	95.942	ENSCPOG00000011448	CPSF1	56	95.942	Cavia_porcellus
ENSDNOG00000043654	CPSF1	94	95.942	ENSCCAG00000037658	CPSF1	57	95.942	Cebus_capucinus
ENSDNOG00000043654	CPSF1	94	95.652	ENSCATG00000037234	CPSF1	57	95.652	Cercocebus_atys
ENSDNOG00000043654	CPSF1	94	96.232	ENSCLAG00000012166	CPSF1	68	96.232	Chinchilla_lanigera
ENSDNOG00000043654	CPSF1	94	96.232	ENSCSAG00000008502	CPSF1	68	96.232	Chlorocebus_sabaeus
ENSDNOG00000043654	CPSF1	94	89.275	ENSCPBG00000018910	CPSF1	55	89.275	Chrysemys_picta_bellii
ENSDNOG00000043654	CPSF1	94	44.126	ENSCING00000000514	-	70	43.840	Ciona_intestinalis
ENSDNOG00000043654	CPSF1	100	47.714	ENSCSAVG00000002293	-	55	51.220	Ciona_savignyi
ENSDNOG00000043654	CPSF1	98	65.889	ENSCANG00000032760	CPSF1	57	95.652	Colobus_angolensis_palliatus
ENSDNOG00000043654	CPSF1	94	96.522	ENSCGRG00001016344	Cpsf1	68	96.522	Cricetulus_griseus_chok1gshd
ENSDNOG00000043654	CPSF1	94	96.522	ENSCGRG00000003118	Cpsf1	69	96.522	Cricetulus_griseus_crigri
ENSDNOG00000043654	CPSF1	94	82.319	ENSCSEG00000013464	cpsf1	56	82.319	Cynoglossus_semilaevis
ENSDNOG00000043654	CPSF1	74	75.850	ENSCVAG00000014059	cpsf1	52	75.768	Cyprinodon_variegatus
ENSDNOG00000043654	CPSF1	94	80.870	ENSDARG00000034178	cpsf1	57	80.870	Danio_rerio
ENSDNOG00000043654	CPSF1	88	96.812	ENSDORG00000006278	Cpsf1	67	96.812	Dipodomys_ordii
ENSDNOG00000043654	CPSF1	97	40.616	FBgn0024698	Cpsf160	57	40.510	Drosophila_melanogaster
ENSDNOG00000043654	CPSF1	94	97.101	ENSEASG00005010774	CPSF1	68	97.101	Equus_asinus_asinus
ENSDNOG00000043654	CPSF1	94	97.101	ENSECAG00000022209	CPSF1	68	97.101	Equus_caballus
ENSDNOG00000043654	CPSF1	94	94.203	ENSEEUG00000000471	CPSF1	57	94.203	Erinaceus_europaeus
ENSDNOG00000043654	CPSF1	94	81.662	ENSELUG00000012271	cpsf1	57	81.662	Esox_lucius
ENSDNOG00000043654	CPSF1	94	96.232	ENSFDAG00000016060	CPSF1	57	96.232	Fukomys_damarensis
ENSDNOG00000043654	CPSF1	94	79.191	ENSFHEG00000016801	cpsf1	56	79.480	Fundulus_heteroclitus
ENSDNOG00000043654	CPSF1	99	80.636	ENSGMOG00000000796	cpsf1	56	80.636	Gadus_morhua
ENSDNOG00000043654	CPSF1	95	75.134	ENSGAFG00000018890	cpsf1	62	76.897	Gambusia_affinis
ENSDNOG00000043654	CPSF1	94	81.503	ENSGACG00000008703	cpsf1	57	81.792	Gasterosteus_aculeatus
ENSDNOG00000043654	CPSF1	94	89.565	ENSGAGG00000004276	CPSF1	60	89.565	Gopherus_agassizii
ENSDNOG00000043654	CPSF1	94	95.942	ENSGGOG00000016185	CPSF1	57	95.942	Gorilla_gorilla
ENSDNOG00000043654	CPSF1	94	82.370	ENSHBUG00000018900	cpsf1	56	82.659	Haplochromis_burtoni
ENSDNOG00000043654	CPSF1	94	96.522	ENSHGLG00000016139	CPSF1	68	96.522	Heterocephalus_glaber_female
ENSDNOG00000043654	CPSF1	94	96.232	ENSHGLG00100009750	CPSF1	68	96.232	Heterocephalus_glaber_male
ENSDNOG00000043654	CPSF1	94	80.870	ENSHCOG00000018509	cpsf1	58	80.870	Hippocampus_comes
ENSDNOG00000043654	CPSF1	94	81.159	ENSIPUG00000011259	cpsf1	57	81.159	Ictalurus_punctatus
ENSDNOG00000043654	CPSF1	87	96.522	ENSSTOG00000009957	CPSF1	65	96.522	Ictidomys_tridecemlineatus
ENSDNOG00000043654	CPSF1	94	96.522	ENSJJAG00000023002	Cpsf1	68	96.522	Jaculus_jaculus
ENSDNOG00000043654	CPSF1	77	61.572	ENSKMAG00000001940	cpsf1	51	73.140	Kryptolebias_marmoratus
ENSDNOG00000043654	CPSF1	94	81.792	ENSLBEG00000003601	cpsf1	67	82.081	Labrus_bergylta
ENSDNOG00000043654	CPSF1	94	82.709	ENSLOCG00000008484	cpsf1	54	84.726	Lepisosteus_oculatus
ENSDNOG00000043654	CPSF1	88	95.652	ENSLAFG00000022601	CPSF1	55	95.652	Loxodonta_africana
ENSDNOG00000043654	CPSF1	94	95.652	ENSMFAG00000037013	CPSF1	57	95.652	Macaca_fascicularis
ENSDNOG00000043654	CPSF1	94	95.652	ENSMMUG00000007380	CPSF1	59	95.652	Macaca_mulatta
ENSDNOG00000043654	CPSF1	87	95.652	ENSMNEG00000043564	CPSF1	54	95.652	Macaca_nemestrina
ENSDNOG00000043654	CPSF1	94	95.652	ENSMLEG00000043010	CPSF1	57	95.652	Mandrillus_leucophaeus
ENSDNOG00000043654	CPSF1	94	82.948	ENSMAMG00000003803	cpsf1	57	83.237	Mastacembelus_armatus
ENSDNOG00000043654	CPSF1	94	75.434	ENSMZEG00005001168	cpsf1	55	76.573	Maylandia_zebra
ENSDNOG00000043654	CPSF1	94	96.812	ENSMAUG00000003601	Cpsf1	68	96.812	Mesocricetus_auratus
ENSDNOG00000043654	CPSF1	94	97.101	ENSMICG00000015767	CPSF1	68	97.101	Microcebus_murinus
ENSDNOG00000043654	CPSF1	94	96.522	ENSMOCG00000022758	Cpsf1	68	96.522	Microtus_ochrogaster
ENSDNOG00000043654	CPSF1	94	82.081	ENSMMOG00000021245	cpsf1	56	82.370	Mola_mola
ENSDNOG00000043654	CPSF1	94	94.783	ENSMODG00000010755	CPSF1	57	94.783	Monodelphis_domestica
ENSDNOG00000043654	CPSF1	96	77.273	ENSMALG00000020545	cpsf1	59	77.540	Monopterus_albus
ENSDNOG00000043654	CPSF1	96	91.421	MGP_CAROLIEiJ_G0019936	Cpsf1	57	96.522	Mus_caroli
ENSDNOG00000043654	CPSF1	96	91.153	ENSMUSG00000034022	Cpsf1	57	96.232	Mus_musculus
ENSDNOG00000043654	CPSF1	94	96.522	MGP_PahariEiJ_G0019946	Cpsf1	68	96.522	Mus_pahari
ENSDNOG00000043654	CPSF1	96	91.421	MGP_SPRETEiJ_G0020839	Cpsf1	57	96.522	Mus_spretus
ENSDNOG00000043654	CPSF1	84	96.232	ENSMPUG00000006419	CPSF1	61	96.232	Mustela_putorius_furo
ENSDNOG00000043654	CPSF1	94	96.812	ENSNGAG00000022460	Cpsf1	68	96.812	Nannospalax_galili
ENSDNOG00000043654	CPSF1	94	73.913	ENSNBRG00000000813	cpsf1	54	73.913	Neolamprologus_brichardi
ENSDNOG00000043654	CPSF1	77	93.274	ENSNLEG00000010633	-	51	93.274	Nomascus_leucogenys
ENSDNOG00000043654	CPSF1	94	96.522	ENSODEG00000013995	CPSF1	68	96.522	Octodon_degus
ENSDNOG00000043654	CPSF1	94	82.370	ENSONIG00000007676	cpsf1	57	82.659	Oreochromis_niloticus
ENSDNOG00000043654	CPSF1	97	74.872	ENSORLG00000013544	cpsf1	60	74.359	Oryzias_latipes
ENSDNOG00000043654	CPSF1	97	74.872	ENSORLG00020021693	cpsf1	60	74.359	Oryzias_latipes_hni
ENSDNOG00000043654	CPSF1	94	80.925	ENSORLG00015009979	cpsf1	57	80.347	Oryzias_latipes_hsok
ENSDNOG00000043654	CPSF1	94	79.769	ENSOMEG00000011849	cpsf1	57	80.058	Oryzias_melastigma
ENSDNOG00000043654	CPSF1	94	97.391	ENSOGAG00000000315	CPSF1	68	97.391	Otolemur_garnettii
ENSDNOG00000043654	CPSF1	94	95.942	ENSPPAG00000019280	CPSF1	57	95.942	Pan_paniscus
ENSDNOG00000043654	CPSF1	94	95.942	ENSPTRG00000051253	-	56	95.942	Pan_troglodytes
ENSDNOG00000043654	CPSF1	94	95.942	ENSPTRG00000049288	-	57	95.942	Pan_troglodytes
ENSDNOG00000043654	CPSF1	87	95.652	ENSPANG00000015005	CPSF1	54	95.652	Papio_anubis
ENSDNOG00000043654	CPSF1	94	82.133	ENSPKIG00000002582	cpsf1	56	82.709	Paramormyrops_kingsleyae
ENSDNOG00000043654	CPSF1	94	94.783	ENSPCIG00000009035	CPSF1	57	94.783	Phascolarctos_cinereus
ENSDNOG00000043654	CPSF1	97	74.479	ENSPFOG00000012870	cpsf1	60	74.479	Poecilia_formosa
ENSDNOG00000043654	CPSF1	97	73.958	ENSPREG00000016307	cpsf1	60	73.958	Poecilia_reticulata
ENSDNOG00000043654	CPSF1	94	84.638	ENSPPYG00000018973	CPSF1	58	93.380	Pongo_abelii
ENSDNOG00000043654	CPSF1	94	96.812	ENSPCOG00000020001	CPSF1	68	96.812	Propithecus_coquereli
ENSDNOG00000043654	CPSF1	94	82.659	ENSPNYG00000004906	cpsf1	57	82.659	Pundamilia_nyererei
ENSDNOG00000043654	CPSF1	94	79.130	ENSPNAG00000024395	cpsf1	56	79.130	Pygocentrus_nattereri
ENSDNOG00000043654	CPSF1	94	96.522	ENSRNOG00000030705	Cpsf1	59	96.522	Rattus_norvegicus
ENSDNOG00000043654	CPSF1	94	95.652	ENSRBIG00000044907	CPSF1	59	95.652	Rhinopithecus_bieti
ENSDNOG00000043654	CPSF1	94	95.652	ENSRROG00000044861	CPSF1	59	95.652	Rhinopithecus_roxellana
ENSDNOG00000043654	CPSF1	88	96.232	ENSSBOG00000027177	CPSF1	55	96.232	Saimiri_boliviensis_boliviensis
ENSDNOG00000043654	CPSF1	94	94.783	ENSSHAG00000006500	CPSF1	57	94.783	Sarcophilus_harrisii
ENSDNOG00000043654	CPSF1	94	80.980	ENSSFOG00015004606	cpsf1	56	81.268	Scleropages_formosus
ENSDNOG00000043654	CPSF1	94	82.997	ENSSMAG00000020547	cpsf1	57	82.709	Scophthalmus_maximus
ENSDNOG00000043654	CPSF1	94	82.370	ENSSDUG00000001100	cpsf1	56	82.659	Seriola_dumerili
ENSDNOG00000043654	CPSF1	94	82.081	ENSSLDG00000003619	cpsf1	56	82.370	Seriola_lalandi_dorsalis
ENSDNOG00000043654	CPSF1	87	89.275	ENSSPUG00000014396	CPSF1	55	89.275	Sphenodon_punctatus
ENSDNOG00000043654	CPSF1	94	81.503	ENSSPAG00000005349	cpsf1	57	81.503	Stegastes_partitus
ENSDNOG00000043654	CPSF1	94	95.942	ENSSSCG00000005906	CPSF1	57	95.942	Sus_scrofa
ENSDNOG00000043654	CPSF1	87	82.184	ENSTRUG00000013134	cpsf1	55	82.184	Takifugu_rubripes
ENSDNOG00000043654	CPSF1	94	81.897	ENSTNIG00000014027	cpsf1	57	81.897	Tetraodon_nigroviridis
ENSDNOG00000043654	CPSF1	89	81.449	ENSTBEG00000001756	CPSF1	62	90.041	Tupaia_belangeri
ENSDNOG00000043654	CPSF1	87	95.273	ENSTTRG00000001937	CPSF1	52	95.273	Tursiops_truncatus
ENSDNOG00000043654	CPSF1	89	97.101	ENSUAMG00000006476	CPSF1	65	97.101	Ursus_americanus
ENSDNOG00000043654	CPSF1	94	80.347	ENSXCOG00000003608	cpsf1	56	80.636	Xiphophorus_couchianus
ENSDNOG00000043654	CPSF1	94	80.347	ENSXMAG00000005798	cpsf1	56	80.636	Xiphophorus_maculatus