EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000046620 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 416 bases
Position: chrJH568305.1:3245003-3245418
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000019373	LSM	PF01423.22	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000031612	-	360	-	ENSDNOP00000019373	119 (aa)	-	UPI0003CBEE5A

Gene Model

Click here to download ENSDNOG00000046620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000046620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000046620	-	100	78.992	ENSDNOG00000032911	-	89	78.992
ENSDNOG00000046620	-	100	75.630	ENSDNOG00000030989	-	89	75.630
ENSDNOG00000046620	-	100	79.832	ENSDNOG00000046387	-	89	79.832

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000046620	-	100	79.832	ENSG00000175324	LSM1	89	79.832	Homo_sapiens
ENSDNOG00000046620	-	100	67.227	ENSAPOG00000010833	lsm1	89	67.227	Acanthochromis_polyacanthus
ENSDNOG00000046620	-	100	79.832	ENSAMEG00000011141	LSM1	89	79.832	Ailuropoda_melanoleuca
ENSDNOG00000046620	-	65	70.130	ENSACIG00000019593	lsm1	64	70.130	Amphilophus_citrinellus
ENSDNOG00000046620	-	100	67.227	ENSAOCG00000017096	lsm1	89	67.227	Amphiprion_ocellaris
ENSDNOG00000046620	-	100	67.227	ENSAOCG00000017997	-	89	67.227	Amphiprion_ocellaris
ENSDNOG00000046620	-	100	67.227	ENSAPEG00000011669	lsm1	89	67.227	Amphiprion_percula
ENSDNOG00000046620	-	100	65.546	ENSATEG00000022266	lsm1	89	65.546	Anabas_testudineus
ENSDNOG00000046620	-	100	79.832	ENSANAG00000027785	LSM1	89	79.832	Aotus_nancymaae
ENSDNOG00000046620	-	100	65.546	ENSACLG00000011400	lsm1	89	65.546	Astatotilapia_calliptera
ENSDNOG00000046620	-	100	67.227	ENSAMXG00000005441	lsm1	89	67.227	Astyanax_mexicanus
ENSDNOG00000046620	-	100	79.832	ENSBTAG00000001612	LSM1	89	79.832	Bos_taurus
ENSDNOG00000046620	-	64	48.684	WBGene00003076	lsm-1	61	48.684	Caenorhabditis_elegans
ENSDNOG00000046620	-	100	79.832	ENSCJAG00000048015	LSM1	89	79.832	Callithrix_jacchus
ENSDNOG00000046620	-	100	79.832	ENSCAFG00000006113	LSM1	89	79.832	Canis_familiaris
ENSDNOG00000046620	-	100	79.832	ENSCAFG00020001822	LSM1	89	79.832	Canis_lupus_dingo
ENSDNOG00000046620	-	100	79.832	ENSCHIG00000013194	LSM1	89	79.832	Capra_hircus
ENSDNOG00000046620	-	100	79.832	ENSTSYG00000010394	LSM1	89	79.832	Carlito_syrichta
ENSDNOG00000046620	-	100	79.832	ENSCPOG00000032671	LSM1	89	79.832	Cavia_porcellus
ENSDNOG00000046620	-	100	79.832	ENSCCAG00000037171	LSM1	89	79.832	Cebus_capucinus
ENSDNOG00000046620	-	100	79.832	ENSCATG00000020377	LSM1	89	79.832	Cercocebus_atys
ENSDNOG00000046620	-	100	78.151	ENSCLAG00000001137	LSM1	89	78.151	Chinchilla_lanigera
ENSDNOG00000046620	-	100	79.832	ENSCSAG00000015485	LSM1	89	79.832	Chlorocebus_sabaeus
ENSDNOG00000046620	-	100	79.832	ENSCHOG00000006030	LSM1	89	79.832	Choloepus_hoffmanni
ENSDNOG00000046620	-	98	67.521	ENSCPBG00000006569	LSM1	79	67.521	Chrysemys_picta_bellii
ENSDNOG00000046620	-	83	55.556	ENSCING00000013536	-	90	52.101	Ciona_intestinalis
ENSDNOG00000046620	-	100	79.832	ENSCANG00000019173	LSM1	89	79.832	Colobus_angolensis_palliatus
ENSDNOG00000046620	-	100	78.992	ENSCGRG00001024560	-	89	78.992	Cricetulus_griseus_chok1gshd
ENSDNOG00000046620	-	88	67.273	ENSCGRG00001002259	-	96	67.273	Cricetulus_griseus_chok1gshd
ENSDNOG00000046620	-	100	78.992	ENSCGRG00000006554	-	89	78.992	Cricetulus_griseus_crigri
ENSDNOG00000046620	-	88	67.273	ENSCGRG00000013603	-	96	67.273	Cricetulus_griseus_crigri
ENSDNOG00000046620	-	100	66.387	ENSCSEG00000008319	lsm1	82	66.387	Cynoglossus_semilaevis
ENSDNOG00000046620	-	100	65.546	ENSCSEG00000010570	lsm1	82	65.546	Cynoglossus_semilaevis
ENSDNOG00000046620	-	100	64.706	ENSCVAG00000003871	lsm1	89	64.706	Cyprinodon_variegatus
ENSDNOG00000046620	-	100	66.387	ENSDARG00000043177	lsm1	89	66.387	Danio_rerio
ENSDNOG00000046620	-	100	79.832	ENSDORG00000028172	Lsm1	89	79.832	Dipodomys_ordii
ENSDNOG00000046620	-	100	47.899	FBgn0261067	LSm1	87	47.899	Drosophila_melanogaster
ENSDNOG00000046620	-	100	78.992	ENSEASG00005016677	LSM1	89	78.992	Equus_asinus_asinus
ENSDNOG00000046620	-	100	78.992	ENSECAG00000010461	LSM1	89	78.992	Equus_caballus
ENSDNOG00000046620	-	81	64.583	ENSEEUG00000015181	LSM1	97	64.583	Erinaceus_europaeus
ENSDNOG00000046620	-	100	68.067	ENSELUG00000023374	lsm1	89	68.067	Esox_lucius
ENSDNOG00000046620	-	100	68.067	ENSELUG00000002322	lsm1	89	68.067	Esox_lucius
ENSDNOG00000046620	-	100	79.832	ENSFCAG00000039335	LSM1	89	79.832	Felis_catus
ENSDNOG00000046620	-	86	77.451	ENSFALG00000006723	LSM1	86	77.451	Ficedula_albicollis
ENSDNOG00000046620	-	100	79.832	ENSFDAG00000007658	LSM1	89	79.832	Fukomys_damarensis
ENSDNOG00000046620	-	100	64.706	ENSFHEG00000009556	lsm1	89	64.706	Fundulus_heteroclitus
ENSDNOG00000046620	-	100	64.706	ENSGMOG00000016651	lsm1	88	64.706	Gadus_morhua
ENSDNOG00000046620	-	100	74.790	ENSGALG00000003245	LSM1	89	74.790	Gallus_gallus
ENSDNOG00000046620	-	100	64.706	ENSGAFG00000011355	lsm1	89	64.706	Gambusia_affinis
ENSDNOG00000046620	-	100	65.546	ENSGACG00000011763	lsm1	88	65.546	Gasterosteus_aculeatus
ENSDNOG00000046620	-	100	74.790	ENSGAGG00000024065	LSM1	89	74.790	Gopherus_agassizii
ENSDNOG00000046620	-	100	79.832	ENSGGOG00000022658	LSM1	89	79.832	Gorilla_gorilla
ENSDNOG00000046620	-	100	65.546	ENSHBUG00000010897	lsm1	89	65.546	Haplochromis_burtoni
ENSDNOG00000046620	-	100	68.908	ENSHGLG00000017574	-	93	68.908	Heterocephalus_glaber_female
ENSDNOG00000046620	-	100	79.832	ENSHGLG00000005711	LSM1	89	79.832	Heterocephalus_glaber_female
ENSDNOG00000046620	-	100	68.908	ENSHGLG00100012152	-	93	68.908	Heterocephalus_glaber_male
ENSDNOG00000046620	-	100	79.832	ENSHGLG00100017660	LSM1	89	79.832	Heterocephalus_glaber_male
ENSDNOG00000046620	-	100	65.546	ENSHCOG00000017233	lsm1	89	65.546	Hippocampus_comes
ENSDNOG00000046620	-	100	67.227	ENSIPUG00000002312	LSM1	89	67.227	Ictalurus_punctatus
ENSDNOG00000046620	-	65	76.623	ENSSTOG00000026870	LSM1	94	76.623	Ictidomys_tridecemlineatus
ENSDNOG00000046620	-	100	78.151	ENSJJAG00000014605	-	89	78.151	Jaculus_jaculus
ENSDNOG00000046620	-	100	65.546	ENSKMAG00000003016	lsm1	89	65.546	Kryptolebias_marmoratus
ENSDNOG00000046620	-	100	65.546	ENSLBEG00000022352	lsm1	89	65.546	Labrus_bergylta
ENSDNOG00000046620	-	86	71.569	ENSLACG00000010947	LSM1	84	71.569	Latimeria_chalumnae
ENSDNOG00000046620	-	100	73.950	ENSLOCG00000015149	lsm1	89	73.950	Lepisosteus_oculatus
ENSDNOG00000046620	-	100	79.832	ENSLAFG00000003534	LSM1	89	79.832	Loxodonta_africana
ENSDNOG00000046620	-	100	79.832	ENSMFAG00000032661	LSM1	89	79.832	Macaca_fascicularis
ENSDNOG00000046620	-	100	79.832	ENSMLEG00000034535	LSM1	89	79.832	Mandrillus_leucophaeus
ENSDNOG00000046620	-	100	65.546	ENSMAMG00000007464	lsm1	89	65.546	Mastacembelus_armatus
ENSDNOG00000046620	-	100	65.546	ENSMZEG00005010321	lsm1	89	65.546	Maylandia_zebra
ENSDNOG00000046620	-	100	74.790	ENSMGAG00000002125	LSM1	89	74.790	Meleagris_gallopavo
ENSDNOG00000046620	-	100	78.992	ENSMICG00000030726	LSM1	89	78.992	Microcebus_murinus
ENSDNOG00000046620	-	100	78.992	ENSMOCG00000022817	Lsm1	89	78.992	Microtus_ochrogaster
ENSDNOG00000046620	-	100	66.387	ENSMMOG00000015466	lsm1	89	66.387	Mola_mola
ENSDNOG00000046620	-	100	77.311	ENSMODG00000010732	-	89	77.311	Monodelphis_domestica
ENSDNOG00000046620	-	65	70.130	ENSMALG00000001478	lsm1	82	70.130	Monopterus_albus
ENSDNOG00000046620	-	100	77.311	MGP_CAROLIEiJ_G0030930	Lsm1	89	77.311	Mus_caroli
ENSDNOG00000046620	-	100	77.311	ENSMUSG00000037296	Lsm1	89	77.311	Mus_musculus
ENSDNOG00000046620	-	100	77.311	MGP_PahariEiJ_G0021400	Lsm1	89	77.311	Mus_pahari
ENSDNOG00000046620	-	100	77.311	MGP_SPRETEiJ_G0032049	Lsm1	89	77.311	Mus_spretus
ENSDNOG00000046620	-	100	78.992	ENSMPUG00000009883	LSM1	89	78.992	Mustela_putorius_furo
ENSDNOG00000046620	-	100	78.992	ENSMLUG00000003734	LSM1	89	78.992	Myotis_lucifugus
ENSDNOG00000046620	-	100	78.992	ENSNGAG00000003753	Lsm1	89	78.992	Nannospalax_galili
ENSDNOG00000046620	-	65	70.130	ENSNBRG00000017370	lsm1	66	70.130	Neolamprologus_brichardi
ENSDNOG00000046620	-	100	79.832	ENSNLEG00000029390	LSM1	89	79.832	Nomascus_leucogenys
ENSDNOG00000046620	-	100	77.311	ENSMEUG00000014077	LSM1	89	77.311	Notamacropus_eugenii
ENSDNOG00000046620	-	86	78.431	ENSOPRG00000000333	LSM1	87	78.431	Ochotona_princeps
ENSDNOG00000046620	-	100	79.832	ENSODEG00000004834	LSM1	89	79.832	Octodon_degus
ENSDNOG00000046620	-	100	65.546	ENSONIG00000010782	lsm1	89	65.546	Oreochromis_niloticus
ENSDNOG00000046620	-	100	76.471	ENSOANG00000003256	LSM1	89	76.471	Ornithorhynchus_anatinus
ENSDNOG00000046620	-	100	79.832	ENSOCUG00000015399	LSM1	89	79.832	Oryctolagus_cuniculus
ENSDNOG00000046620	-	100	67.227	ENSORLG00000030288	lsm1	89	67.227	Oryzias_latipes
ENSDNOG00000046620	-	100	67.227	ENSORLG00020006213	-	77	67.227	Oryzias_latipes_hni
ENSDNOG00000046620	-	100	67.227	ENSORLG00020003941	lsm1	89	67.227	Oryzias_latipes_hni
ENSDNOG00000046620	-	100	67.227	ENSORLG00015018350	lsm1	89	67.227	Oryzias_latipes_hsok
ENSDNOG00000046620	-	100	66.387	ENSOMEG00000012454	lsm1	89	66.387	Oryzias_melastigma
ENSDNOG00000046620	-	100	79.832	ENSOGAG00000015161	LSM1	89	79.832	Otolemur_garnettii
ENSDNOG00000046620	-	100	79.832	ENSOARG00000001317	LSM1	89	79.832	Ovis_aries
ENSDNOG00000046620	-	100	79.832	ENSPPAG00000032279	LSM1	89	79.832	Pan_paniscus
ENSDNOG00000046620	-	100	79.832	ENSPPRG00000014172	-	89	79.832	Panthera_pardus
ENSDNOG00000046620	-	100	79.832	ENSPTIG00000010289	LSM1	89	79.832	Panthera_tigris_altaica
ENSDNOG00000046620	-	100	79.832	ENSPTRG00000020169	LSM1	89	79.832	Pan_troglodytes
ENSDNOG00000046620	-	100	79.832	ENSPANG00000008814	LSM1	89	79.832	Papio_anubis
ENSDNOG00000046620	-	99	71.186	ENSPKIG00000001839	lsm1	89	71.186	Paramormyrops_kingsleyae
ENSDNOG00000046620	-	100	63.866	ENSPKIG00000019409	LSM1	89	63.866	Paramormyrops_kingsleyae
ENSDNOG00000046620	-	97	68.966	ENSPSIG00000012563	LSM1	88	68.966	Pelodiscus_sinensis
ENSDNOG00000046620	-	65	70.130	ENSPMGG00000022999	lsm1	73	70.130	Periophthalmus_magnuspinnatus
ENSDNOG00000046620	-	82	64.286	ENSPMAG00000002671	lsm1	87	64.286	Petromyzon_marinus
ENSDNOG00000046620	-	100	77.311	ENSPCIG00000008880	LSM1	89	77.311	Phascolarctos_cinereus
ENSDNOG00000046620	-	100	64.706	ENSPFOG00000016029	lsm1	89	64.706	Poecilia_formosa
ENSDNOG00000046620	-	100	64.706	ENSPLAG00000007879	lsm1	89	64.706	Poecilia_latipinna
ENSDNOG00000046620	-	100	64.706	ENSPMEG00000023550	lsm1	89	64.706	Poecilia_mexicana
ENSDNOG00000046620	-	100	64.706	ENSPREG00000009574	lsm1	89	64.706	Poecilia_reticulata
ENSDNOG00000046620	-	100	79.832	ENSPPYG00000018521	LSM1	89	79.832	Pongo_abelii
ENSDNOG00000046620	-	100	79.832	ENSPCOG00000020901	-	89	79.832	Propithecus_coquereli
ENSDNOG00000046620	-	100	79.832	ENSPVAG00000006016	LSM1	89	79.832	Pteropus_vampyrus
ENSDNOG00000046620	-	100	65.546	ENSPNYG00000018067	lsm1	89	65.546	Pundamilia_nyererei
ENSDNOG00000046620	-	100	66.387	ENSPNAG00000013707	lsm1	89	66.387	Pygocentrus_nattereri
ENSDNOG00000046620	-	100	77.311	ENSRNOG00000015375	Lsm1	89	77.311	Rattus_norvegicus
ENSDNOG00000046620	-	100	79.832	ENSRBIG00000027449	LSM1	89	79.832	Rhinopithecus_bieti
ENSDNOG00000046620	-	100	79.832	ENSRROG00000036074	LSM1	89	79.832	Rhinopithecus_roxellana
ENSDNOG00000046620	-	100	77.311	ENSSHAG00000017260	LSM1	89	77.311	Sarcophilus_harrisii
ENSDNOG00000046620	-	100	72.269	ENSSFOG00015019528	lsm1	89	72.269	Scleropages_formosus
ENSDNOG00000046620	-	100	65.546	ENSSMAG00000004930	lsm1	89	65.546	Scophthalmus_maximus
ENSDNOG00000046620	-	100	66.387	ENSSDUG00000021823	lsm1	89	66.387	Seriola_dumerili
ENSDNOG00000046620	-	100	66.387	ENSSLDG00000012154	lsm1	89	66.387	Seriola_lalandi_dorsalis
ENSDNOG00000046620	-	100	74.790	ENSSPUG00000014878	LSM1	89	74.790	Sphenodon_punctatus
ENSDNOG00000046620	-	100	66.387	ENSSPAG00000020548	lsm1	89	66.387	Stegastes_partitus
ENSDNOG00000046620	-	100	78.151	ENSSSCG00000039058	LSM1	89	78.151	Sus_scrofa
ENSDNOG00000046620	-	100	74.790	ENSTGUG00000004793	LSM1	89	74.790	Taeniopygia_guttata
ENSDNOG00000046620	-	100	68.067	ENSTRUG00000025239	lsm1	89	68.067	Takifugu_rubripes
ENSDNOG00000046620	-	100	68.067	ENSTNIG00000004055	lsm1	89	68.067	Tetraodon_nigroviridis
ENSDNOG00000046620	-	86	78.431	ENSTBEG00000015884	LSM1	87	78.431	Tupaia_belangeri
ENSDNOG00000046620	-	100	79.832	ENSTTRG00000004482	LSM1	89	79.832	Tursiops_truncatus
ENSDNOG00000046620	-	100	79.832	ENSUAMG00000004103	LSM1	89	79.832	Ursus_americanus
ENSDNOG00000046620	-	100	79.832	ENSUMAG00000009132	LSM1	89	79.832	Ursus_maritimus
ENSDNOG00000046620	-	65	75.325	ENSVPAG00000011593	LSM1	100	75.325	Vicugna_pacos
ENSDNOG00000046620	-	100	79.832	ENSVVUG00000020191	LSM1	89	79.832	Vulpes_vulpes
ENSDNOG00000046620	-	72	61.628	ENSVVUG00000014880	-	91	61.628	Vulpes_vulpes
ENSDNOG00000046620	-	100	72.358	ENSXETG00000009004	lsm1	90	72.358	Xenopus_tropicalis
ENSDNOG00000046620	-	100	64.706	ENSXCOG00000015631	lsm1	89	64.706	Xiphophorus_couchianus
ENSDNOG00000046620	-	100	64.706	ENSXMAG00000026637	lsm1	89	64.706	Xiphophorus_maculatus