EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000048283 (Gene tree)
Gene ID: 101412130
Gene Symbol: SMG6
Alias: C17orf31|EST1A|KIAA0732|SMG-6
Full Name: SMG6%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 250422 bases
Position: chrJH582994.1:232360-482781
Accession: 101412130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000024057	EST1	PF10374.9	1.5e-15	1	1
ENSDNOP00000024057	EST1_DNA_bind	PF10373.9	3.1e-61	1	1
ENSDNOP00000024057	PIN_4	PF13638.6	2.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000045134	SMG6-201	6524	XM_004483742	ENSDNOP00000024057	1419 (aa)	XP_004483799	UPI000328CDA1

Gene Model

Click here to download ENSDNOG00000048283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000048283's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000048283	SMG6	100	91.966	ENSG00000070366	SMG6	100	97.065	Homo_sapiens
ENSDNOG00000048283	SMG6	83	54.346	ENSAPOG00000019448	smg6	74	54.553	Acanthochromis_polyacanthus
ENSDNOG00000048283	SMG6	100	93.446	ENSAMEG00000007632	SMG6	100	93.446	Ailuropoda_melanoleuca
ENSDNOG00000048283	SMG6	98	49.473	ENSACIG00000012997	smg6	78	55.048	Amphilophus_citrinellus
ENSDNOG00000048283	SMG6	71	59.028	ENSAOCG00000002630	smg6	74	54.375	Amphiprion_ocellaris
ENSDNOG00000048283	SMG6	83	54.016	ENSAPEG00000019101	smg6	74	54.453	Amphiprion_percula
ENSDNOG00000048283	SMG6	83	54.248	ENSATEG00000006483	smg6	73	54.630	Anabas_testudineus
ENSDNOG00000048283	SMG6	87	56.772	ENSACAG00000011783	SMG6	99	58.011	Anolis_carolinensis
ENSDNOG00000048283	SMG6	100	92.530	ENSANAG00000035760	SMG6	100	92.530	Aotus_nancymaae
ENSDNOG00000048283	SMG6	71	58.986	ENSACLG00000005288	smg6	80	54.738	Astatotilapia_calliptera
ENSDNOG00000048283	SMG6	68	62.866	ENSAMXG00000017326	smg6	72	61.576	Astyanax_mexicanus
ENSDNOG00000048283	SMG6	100	92.530	ENSBTAG00000000267	SMG6	100	92.530	Bos_taurus
ENSDNOG00000048283	SMG6	100	92.459	ENSCJAG00000001820	SMG6	100	92.459	Callithrix_jacchus
ENSDNOG00000048283	SMG6	100	93.094	ENSCAFG00000019260	SMG6	100	93.094	Canis_familiaris
ENSDNOG00000048283	SMG6	100	93.094	ENSCAFG00020009770	SMG6	100	93.094	Canis_lupus_dingo
ENSDNOG00000048283	SMG6	100	92.319	ENSCHIG00000021998	SMG6	100	92.319	Capra_hircus
ENSDNOG00000048283	SMG6	100	92.107	ENSTSYG00000003406	SMG6	100	97.260	Carlito_syrichta
ENSDNOG00000048283	SMG6	98	77.050	ENSCAPG00000016197	SMG6	99	83.138	Cavia_aperea
ENSDNOG00000048283	SMG6	100	91.056	ENSCPOG00000014878	SMG6	100	91.056	Cavia_porcellus
ENSDNOG00000048283	SMG6	100	92.671	ENSCCAG00000035801	SMG6	100	92.671	Cebus_capucinus
ENSDNOG00000048283	SMG6	100	92.530	ENSCATG00000031956	SMG6	100	92.530	Cercocebus_atys
ENSDNOG00000048283	SMG6	100	91.825	ENSCLAG00000006748	SMG6	100	91.825	Chinchilla_lanigera
ENSDNOG00000048283	SMG6	100	92.812	ENSCSAG00000013800	SMG6	100	92.812	Chlorocebus_sabaeus
ENSDNOG00000048283	SMG6	57	98.507	ENSCHOG00000005024	-	73	98.507	Choloepus_hoffmanni
ENSDNOG00000048283	SMG6	100	72.337	ENSCPBG00000020369	SMG6	100	72.891	Chrysemys_picta_bellii
ENSDNOG00000048283	SMG6	98	92.585	ENSCANG00000031764	SMG6	100	96.673	Colobus_angolensis_palliatus
ENSDNOG00000048283	SMG6	55	87.548	ENSCGRG00001019595	Smg6	100	87.548	Cricetulus_griseus_chok1gshd
ENSDNOG00000048283	SMG6	98	84.438	ENSCGRG00000007782	Smg6	100	84.654	Cricetulus_griseus_crigri
ENSDNOG00000048283	SMG6	86	53.822	ENSCSEG00000012757	smg6	78	54.604	Cynoglossus_semilaevis
ENSDNOG00000048283	SMG6	72	57.376	ENSCVAG00000012789	smg6	74	53.276	Cyprinodon_variegatus
ENSDNOG00000048283	SMG6	97	54.102	ENSDARG00000100481	smg6	89	54.751	Danio_rerio
ENSDNOG00000048283	SMG6	100	88.912	ENSDORG00000016614	Smg6	94	97.748	Dipodomys_ordii
ENSDNOG00000048283	SMG6	93	97.619	ENSETEG00000016790	SMG6	93	97.619	Echinops_telfairi
ENSDNOG00000048283	SMG6	75	50.243	ENSEBUG00000005059	smg6	73	49.662	Eptatretus_burgeri
ENSDNOG00000048283	SMG6	99	93.790	ENSEASG00005009318	SMG6	99	93.790	Equus_asinus_asinus
ENSDNOG00000048283	SMG6	99	93.507	ENSECAG00000006519	SMG6	99	93.507	Equus_caballus
ENSDNOG00000048283	SMG6	100	81.889	ENSEEUG00000003493	SMG6	100	81.889	Erinaceus_europaeus
ENSDNOG00000048283	SMG6	71	60.000	ENSELUG00000005934	smg6	67	55.808	Esox_lucius
ENSDNOG00000048283	SMG6	100	94.151	ENSFCAG00000028817	SMG6	100	94.151	Felis_catus
ENSDNOG00000048283	SMG6	98	71.642	ENSFALG00000006538	SMG6	100	71.713	Ficedula_albicollis
ENSDNOG00000048283	SMG6	100	91.825	ENSFDAG00000015106	SMG6	100	91.825	Fukomys_damarensis
ENSDNOG00000048283	SMG6	83	52.840	ENSFHEG00000013282	smg6	75	53.193	Fundulus_heteroclitus
ENSDNOG00000048283	SMG6	53	67.757	ENSGMOG00000019077	smg6	58	67.757	Gadus_morhua
ENSDNOG00000048283	SMG6	100	71.538	ENSGALG00000003108	SMG6	98	71.608	Gallus_gallus
ENSDNOG00000048283	SMG6	83	53.448	ENSGAFG00000000379	smg6	74	53.762	Gambusia_affinis
ENSDNOG00000048283	SMG6	91	53.299	ENSGACG00000020521	smg6	100	52.854	Gasterosteus_aculeatus
ENSDNOG00000048283	SMG6	98	71.904	ENSGAGG00000025617	SMG6	100	72.470	Gopherus_agassizii
ENSDNOG00000048283	SMG6	100	92.882	ENSGGOG00000017156	SMG6	100	92.882	Gorilla_gorilla
ENSDNOG00000048283	SMG6	86	53.252	ENSHBUG00000021311	smg6	74	55.086	Haplochromis_burtoni
ENSDNOG00000048283	SMG6	100	91.344	ENSHGLG00000012882	SMG6	100	91.344	Heterocephalus_glaber_female
ENSDNOG00000048283	SMG6	100	91.414	ENSHGLG00100017815	SMG6	100	91.414	Heterocephalus_glaber_male
ENSDNOG00000048283	SMG6	71	58.874	ENSHCOG00000008761	smg6	97	53.647	Hippocampus_comes
ENSDNOG00000048283	SMG6	96	55.244	ENSIPUG00000012493	smg6	88	54.798	Ictalurus_punctatus
ENSDNOG00000048283	SMG6	100	93.376	ENSSTOG00000028127	SMG6	100	93.376	Ictidomys_tridecemlineatus
ENSDNOG00000048283	SMG6	79	89.117	ENSJJAG00000015367	Smg6	95	86.482	Jaculus_jaculus
ENSDNOG00000048283	SMG6	86	52.719	ENSKMAG00000000279	smg6	75	54.232	Kryptolebias_marmoratus
ENSDNOG00000048283	SMG6	55	57.403	ENSLACG00000000806	-	98	57.228	Latimeria_chalumnae
ENSDNOG00000048283	SMG6	73	65.079	ENSLOCG00000006448	smg6	86	60.032	Lepisosteus_oculatus
ENSDNOG00000048283	SMG6	100	92.812	ENSLAFG00000001261	SMG6	100	92.812	Loxodonta_africana
ENSDNOG00000048283	SMG6	100	93.023	ENSMFAG00000003394	SMG6	100	93.023	Macaca_fascicularis
ENSDNOG00000048283	SMG6	100	93.023	ENSMMUG00000023161	SMG6	100	93.023	Macaca_mulatta
ENSDNOG00000048283	SMG6	100	88.053	ENSMNEG00000044592	SMG6	100	88.053	Macaca_nemestrina
ENSDNOG00000048283	SMG6	93	96.805	ENSMLEG00000029353	SMG6	100	96.805	Mandrillus_leucophaeus
ENSDNOG00000048283	SMG6	83	55.477	ENSMAMG00000020119	smg6	98	48.212	Mastacembelus_armatus
ENSDNOG00000048283	SMG6	71	59.099	ENSMZEG00005024736	smg6	74	54.874	Maylandia_zebra
ENSDNOG00000048283	SMG6	74	65.817	ENSMGAG00000005401	-	99	65.817	Meleagris_gallopavo
ENSDNOG00000048283	SMG6	100	93.728	ENSMICG00000012913	SMG6	100	93.728	Microcebus_murinus
ENSDNOG00000048283	SMG6	100	47.802	ENSMMOG00000010883	smg6	100	48.221	Mola_mola
ENSDNOG00000048283	SMG6	100	85.443	ENSMODG00000010622	SMG6	100	85.443	Monodelphis_domestica
ENSDNOG00000048283	SMG6	83	53.948	ENSMALG00000001106	smg6	73	54.673	Monopterus_albus
ENSDNOG00000048283	SMG6	100	90.698	MGP_CAROLIEiJ_G0016729	Smg6	100	90.698	Mus_caroli
ENSDNOG00000048283	SMG6	100	90.768	ENSMUSG00000038290	Smg6	100	90.768	Mus_musculus
ENSDNOG00000048283	SMG6	100	90.486	MGP_PahariEiJ_G0017866	Smg6	100	90.486	Mus_pahari
ENSDNOG00000048283	SMG6	100	90.627	MGP_SPRETEiJ_G0017572	Smg6	100	90.627	Mus_spretus
ENSDNOG00000048283	SMG6	100	93.587	ENSMPUG00000013046	SMG6	100	93.587	Mustela_putorius_furo
ENSDNOG00000048283	SMG6	100	92.530	ENSMLUG00000005739	SMG6	100	92.530	Myotis_lucifugus
ENSDNOG00000048283	SMG6	98	91.289	ENSNGAG00000007287	Smg6	100	91.289	Nannospalax_galili
ENSDNOG00000048283	SMG6	86	52.680	ENSNBRG00000009511	smg6	81	54.510	Neolamprologus_brichardi
ENSDNOG00000048283	SMG6	98	92.468	ENSNLEG00000017171	SMG6	100	97.260	Nomascus_leucogenys
ENSDNOG00000048283	SMG6	98	82.112	ENSMEUG00000015804	SMG6	100	81.505	Notamacropus_eugenii
ENSDNOG00000048283	SMG6	62	90.950	ENSOPRG00000000579	SMG6	85	97.368	Ochotona_princeps
ENSDNOG00000048283	SMG6	100	85.644	ENSODEG00000008038	SMG6	100	85.644	Octodon_degus
ENSDNOG00000048283	SMG6	100	50.670	ENSONIG00000005594	smg6	100	51.501	Oreochromis_niloticus
ENSDNOG00000048283	SMG6	100	92.118	ENSOCUG00000013018	SMG6	100	92.259	Oryctolagus_cuniculus
ENSDNOG00000048283	SMG6	97	53.072	ENSORLG00000003317	smg6	86	54.353	Oryzias_latipes
ENSDNOG00000048283	SMG6	95	54.101	ENSORLG00020015343	smg6	86	54.360	Oryzias_latipes_hni
ENSDNOG00000048283	SMG6	95	53.816	ENSORLG00015020454	smg6	86	54.310	Oryzias_latipes_hsok
ENSDNOG00000048283	SMG6	83	53.302	ENSOMEG00000010838	smg6	75	53.785	Oryzias_melastigma
ENSDNOG00000048283	SMG6	100	92.958	ENSOGAG00000004483	SMG6	100	92.958	Otolemur_garnettii
ENSDNOG00000048283	SMG6	100	90.775	ENSOARG00000015076	SMG6	100	92.274	Ovis_aries
ENSDNOG00000048283	SMG6	100	92.882	ENSPPAG00000043296	SMG6	100	92.882	Pan_paniscus
ENSDNOG00000048283	SMG6	100	94.221	ENSPPRG00000014581	SMG6	100	94.221	Panthera_pardus
ENSDNOG00000048283	SMG6	98	94.368	ENSPTIG00000008925	SMG6	100	98.239	Panthera_tigris_altaica
ENSDNOG00000048283	SMG6	100	92.671	ENSPTRG00000008544	SMG6	100	97.065	Pan_troglodytes
ENSDNOG00000048283	SMG6	100	92.741	ENSPANG00000024588	SMG6	100	92.741	Papio_anubis
ENSDNOG00000048283	SMG6	89	70.312	ENSPSIG00000006660	SMG6	96	70.391	Pelodiscus_sinensis
ENSDNOG00000048283	SMG6	98	60.764	ENSPMGG00000000844	smg6	100	60.764	Periophthalmus_magnuspinnatus
ENSDNOG00000048283	SMG6	100	91.966	ENSPEMG00000020707	Smg6	97	95.133	Peromyscus_maniculatus_bairdii
ENSDNOG00000048283	SMG6	100	50.869	ENSPFOG00000012035	smg6	100	50.703	Poecilia_formosa
ENSDNOG00000048283	SMG6	76	56.003	ENSPLAG00000017660	smg6	74	53.333	Poecilia_latipinna
ENSDNOG00000048283	SMG6	76	55.717	ENSPMEG00000000258	smg6	74	53.647	Poecilia_mexicana
ENSDNOG00000048283	SMG6	83	53.804	ENSPREG00000010066	smg6	74	53.689	Poecilia_reticulata
ENSDNOG00000048283	SMG6	100	87.553	ENSPPYG00000007790	SMG6	100	87.553	Pongo_abelii
ENSDNOG00000048283	SMG6	100	88.513	ENSPCAG00000000552	SMG6	100	88.513	Procavia_capensis
ENSDNOG00000048283	SMG6	100	93.517	ENSPCOG00000020925	SMG6	100	93.517	Propithecus_coquereli
ENSDNOG00000048283	SMG6	86	100.000	ENSPVAG00000002159	SMG6	86	100.000	Pteropus_vampyrus
ENSDNOG00000048283	SMG6	86	54.082	ENSPNYG00000024151	smg6	79	56.715	Pundamilia_nyererei
ENSDNOG00000048283	SMG6	87	51.229	ENSPNAG00000015480	smg6	74	63.243	Pygocentrus_nattereri
ENSDNOG00000048283	SMG6	100	90.909	ENSRNOG00000003041	Smg6	100	90.909	Rattus_norvegicus
ENSDNOG00000048283	SMG6	100	92.812	ENSRBIG00000024746	SMG6	100	92.812	Rhinopithecus_bieti
ENSDNOG00000048283	SMG6	100	92.882	ENSRROG00000030423	SMG6	100	96.282	Rhinopithecus_roxellana
ENSDNOG00000048283	SMG6	100	92.600	ENSSBOG00000022518	SMG6	100	90.909	Saimiri_boliviensis_boliviensis
ENSDNOG00000048283	SMG6	98	85.499	ENSSHAG00000010045	SMG6	98	84.825	Sarcophilus_harrisii
ENSDNOG00000048283	SMG6	73	61.293	ENSSFOG00015005436	smg6	70	57.165	Scleropages_formosus
ENSDNOG00000048283	SMG6	83	54.567	ENSSMAG00000019777	smg6	73	54.264	Scophthalmus_maximus
ENSDNOG00000048283	SMG6	83	54.319	ENSSDUG00000016412	smg6	74	54.524	Seriola_dumerili
ENSDNOG00000048283	SMG6	82	52.793	ENSSLDG00000020747	smg6	77	53.560	Seriola_lalandi_dorsalis
ENSDNOG00000048283	SMG6	99	69.284	ENSSPUG00000007152	SMG6	99	69.284	Sphenodon_punctatus
ENSDNOG00000048283	SMG6	71	58.532	ENSSPAG00000015633	smg6	74	54.595	Stegastes_partitus
ENSDNOG00000048283	SMG6	100	92.465	ENSSSCG00000017826	SMG6	100	92.465	Sus_scrofa
ENSDNOG00000048283	SMG6	100	71.950	ENSTGUG00000005836	SMG6	100	72.090	Taeniopygia_guttata
ENSDNOG00000048283	SMG6	100	48.483	ENSTRUG00000000358	smg6	81	54.379	Takifugu_rubripes
ENSDNOG00000048283	SMG6	100	49.636	ENSTNIG00000016164	smg6	100	49.472	Tetraodon_nigroviridis
ENSDNOG00000048283	SMG6	100	88.302	ENSTBEG00000011424	SMG6	100	88.302	Tupaia_belangeri
ENSDNOG00000048283	SMG6	91	92.273	ENSTTRG00000001175	SMG6	91	92.273	Tursiops_truncatus
ENSDNOG00000048283	SMG6	100	93.530	ENSUAMG00000025152	SMG6	100	93.588	Ursus_americanus
ENSDNOG00000048283	SMG6	98	93.791	ENSUMAG00000009306	SMG6	100	93.791	Ursus_maritimus
ENSDNOG00000048283	SMG6	85	100.000	ENSVPAG00000000225	SMG6	88	100.000	Vicugna_pacos
ENSDNOG00000048283	SMG6	100	93.164	ENSVVUG00000021727	SMG6	100	93.164	Vulpes_vulpes
ENSDNOG00000048283	SMG6	98	59.452	ENSXETG00000023799	SMG6	100	59.311	Xenopus_tropicalis
ENSDNOG00000048283	SMG6	72	59.517	ENSXCOG00000009867	smg6	74	54.170	Xiphophorus_couchianus
ENSDNOG00000048283	SMG6	83	54.069	ENSXMAG00000010321	smg6	74	53.678	Xiphophorus_maculatus