EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000048335 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Plus strand
Length: 960 bases
Position: chrJH565206.1:299651-300610
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000034027	RRM_1	PF00076.22	2.6e-23	1	2
ENSDNOP00000034027	RRM_1	PF00076.22	2.6e-23	2	2
ENSDNOP00000034027	HnRNPA1	PF11627.8	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000032340	-	918	-	ENSDNOP00000034027	305 (aa)	-	UPI0003CBE503

Gene Model

Click here to download ENSDNOG00000048335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000048335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000048335	-	53	32.317	ENSDNOG00000033765	-	70	31.638
ENSDNOG00000048335	-	92	54.054	ENSDNOG00000035292	-	100	52.397
ENSDNOG00000048335	-	82	57.895	ENSDNOG00000036385	-	93	60.870
ENSDNOG00000048335	-	94	57.944	ENSDNOG00000030945	-	100	57.944
ENSDNOG00000048335	-	94	72.848	ENSDNOG00000039227	-	94	71.854
ENSDNOG00000048335	-	64	57.653	ENSDNOG00000012928	-	88	46.965
ENSDNOG00000048335	-	82	55.046	ENSDNOG00000049276	-	99	55.046
ENSDNOG00000048335	-	94	62.500	ENSDNOG00000040960	-	94	62.252
ENSDNOG00000048335	-	89	51.838	ENSDNOG00000039025	-	100	51.282
ENSDNOG00000048335	-	92	60.351	ENSDNOG00000041750	-	90	58.451
ENSDNOG00000048335	-	70	50.000	ENSDNOG00000037420	-	91	49.091
ENSDNOG00000048335	-	94	59.292	ENSDNOG00000043304	-	93	64.583
ENSDNOG00000048335	-	68	54.067	ENSDNOG00000044709	-	85	48.727
ENSDNOG00000048335	-	60	30.968	ENSDNOG00000014501	MSI2	55	31.373
ENSDNOG00000048335	-	75	46.121	ENSDNOG00000043784	-	89	39.667
ENSDNOG00000048335	-	92	62.630	ENSDNOG00000046137	-	90	60.424
ENSDNOG00000048335	-	57	30.508	ENSDNOG00000018280	-	55	30.508
ENSDNOG00000048335	-	93	52.013	ENSDNOG00000037882	-	99	51.027
ENSDNOG00000048335	-	71	32.273	ENSDNOG00000045079	-	60	32.240
ENSDNOG00000048335	-	85	72.761	ENSDNOG00000034908	-	98	72.015
ENSDNOG00000048335	-	59	67.213	ENSDNOG00000019022	HNRNPA3	74	56.028
ENSDNOG00000048335	-	93	48.973	ENSDNOG00000039534	-	93	48.454
ENSDNOG00000048335	-	57	48.000	ENSDNOG00000030903	HNRNPA0	90	40.625
ENSDNOG00000048335	-	77	49.796	ENSDNOG00000033368	-	80	62.500
ENSDNOG00000048335	-	91	54.007	ENSDNOG00000044747	-	93	51.228
ENSDNOG00000048335	-	58	51.955	ENSDNOG00000009228	-	81	57.333
ENSDNOG00000048335	-	66	56.436	ENSDNOG00000046740	-	86	46.395
ENSDNOG00000048335	-	59	63.388	ENSDNOG00000031964	-	86	55.052

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000048335	-	64	57.653	ENSAMEG00000002186	-	100	54.514	Ailuropoda_melanoleuca
ENSDNOG00000048335	-	78	64.516	ENSANAG00000031918	-	91	64.516	Aotus_nancymaae
ENSDNOG00000048335	-	94	69.408	ENSCAFG00000006327	-	94	68.092	Canis_familiaris
ENSDNOG00000048335	-	93	68.667	ENSCAFG00000017180	-	94	67.333	Canis_familiaris
ENSDNOG00000048335	-	88	66.426	ENSCHIG00000020351	-	90	66.901	Capra_hircus
ENSDNOG00000048335	-	54	58.084	ENSCGRG00001017212	-	76	49.818	Cricetulus_griseus_chok1gshd
ENSDNOG00000048335	-	94	73.510	ENSDORG00000027821	-	94	72.848	Dipodomys_ordii
ENSDNOG00000048335	-	92	42.361	ENSETEG00000010244	-	92	43.056	Echinops_telfairi
ENSDNOG00000048335	-	61	54.497	ENSETEG00000004129	-	71	54.639	Echinops_telfairi
ENSDNOG00000048335	-	94	72.517	ENSFDAG00000021342	-	94	71.854	Fukomys_damarensis
ENSDNOG00000048335	-	94	72.517	ENSHGLG00000003139	HNRNPA1	94	71.854	Heterocephalus_glaber_female
ENSDNOG00000048335	-	94	72.517	ENSHGLG00100015974	HNRNPA1	94	71.854	Heterocephalus_glaber_male
ENSDNOG00000048335	-	92	56.747	ENSHGLG00100017719	-	93	58.362	Heterocephalus_glaber_male
ENSDNOG00000048335	-	80	56.420	ENSSTOG00000034519	-	80	55.642	Ictidomys_tridecemlineatus
ENSDNOG00000048335	-	79	54.000	ENSMNEG00000038539	-	92	46.914	Macaca_nemestrina
ENSDNOG00000048335	-	78	59.091	ENSMPUG00000008269	-	96	52.650	Mustela_putorius_furo
ENSDNOG00000048335	-	78	49.388	ENSNLEG00000032512	-	93	64.286	Nomascus_leucogenys
ENSDNOG00000048335	-	88	53.237	ENSPTIG00000013949	-	90	52.518	Panthera_tigris_altaica
ENSDNOG00000048335	-	90	72.281	ENSTBEG00000012511	-	99	72.281	Tupaia_belangeri
ENSDNOG00000048335	-	95	48.534	ENSTBEG00000007607	-	94	47.315	Tupaia_belangeri