EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSDNOG00000048450 (Gene tree)
Gene ID
101416864
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Dasypus_novemcinctus
Status
putative
Strand
Minus strand
Length
28284 bases
Position
chrJH569036.1:41806-70089
Accession
15797
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDNOP00000021135PABPPF00658.186.4e-2711
ENSDNOP00000021135RRM_5PF13893.66.1e-0811
ENSDNOP00000021135RRM_1PF00076.224.9e-8914
ENSDNOP00000021135RRM_1PF00076.224.9e-8924
ENSDNOP00000021135RRM_1PF00076.224.9e-8934
ENSDNOP00000021135RRM_1PF00076.224.9e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDNOT00000045681PABPC1L-2012295-ENSDNOP00000021135614 (aa)-UPI000328B09B
Gene Model
Click here to download ENSDNOG00000048450's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000048450's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDNOG00000048450PABPC1L5934.667ENSDNOG00000024534RBM197334.667
ENSDNOG00000048450PABPC1L5934.759ENSDNOG00000048908-8134.759
ENSDNOG00000048450PABPC1L5531.098ENSDNOG00000030903HNRNPA05232.051
ENSDNOG00000048450PABPC1L9865.385ENSDNOG00000018444-9765.385
ENSDNOG00000048450PABPC1L5336.047ENSDNOG00000000252CELF27136.047
ENSDNOG00000048450PABPC1L9752.254ENSDNOG00000030956-9952.421
ENSDNOG00000048450PABPC1L6267.218ENSDNOG00000031077PABPC4L9767.218
ENSDNOG00000048450PABPC1L7280.000ENSDNOG00000006598-9580.000
ENSDNOG00000048450PABPC1L9970.128ENSDNOG00000008718PABPC19870.128
ENSDNOG00000048450PABPC1L6333.735ENSDNOG00000033502ELAVL48733.735
ENSDNOG00000048450PABPC1L5035.616ENSDNOG00000041501CELF36635.616
ENSDNOG00000048450PABPC1L6334.940ENSDNOG00000035657ELAVL28534.940
ENSDNOG00000048450PABPC1L6073.262ENSDNOG00000030926-9970.051
ENSDNOG00000048450PABPC1L5730.409ENSDNOG00000009552TIAL17430.114
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDNOG00000048450PABPC1L9989.396ENSG00000101104PABPC1L9994.753Homo_sapiens
ENSDNOG00000048450PABPC1L9967.205ENSAPOG00000010842pabpc1l9967.367Acanthochromis_polyacanthus
ENSDNOG00000048450PABPC1L9978.125ENSAMEG00000004099PABPC1L10078.281Ailuropoda_melanoleuca
ENSDNOG00000048450PABPC1L9967.949ENSACIG00000021004-9974.725Amphilophus_citrinellus
ENSDNOG00000048450PABPC1L9967.143ENSAOCG00000006167-9967.143Amphiprion_ocellaris
ENSDNOG00000048450PABPC1L9968.285ENSAPEG00000010558-9781.188Amphiprion_percula
ENSDNOG00000048450PABPC1L9968.669ENSATEG00000007428pabpc1l9968.669Anabas_testudineus
ENSDNOG00000048450PABPC1L9877.124ENSAPLG00000008415PABPC1L9877.199Anas_platyrhynchos
ENSDNOG00000048450PABPC1L9976.244ENSACAG00000011841PABPC1L9876.244Anolis_carolinensis
ENSDNOG00000048450PABPC1L9987.276ENSANAG00000026826PABPC1L9987.276Aotus_nancymaae
ENSDNOG00000048450PABPC1L9967.943ENSACLG00000024791pabpc1l9967.943Astatotilapia_calliptera
ENSDNOG00000048450PABPC1L9971.611ENSAMXG00000013552pabpc1l9971.611Astyanax_mexicanus
ENSDNOG00000048450PABPC1L5997.024ENSBTAG00000055300-10097.024Bos_taurus
ENSDNOG00000048450PABPC1L6877.273ENSBTAG00000016849PABPC1L8677.273Bos_taurus
ENSDNOG00000048450PABPC1L9987.765ENSCJAG00000017628PABPC1L9987.765Callithrix_jacchus
ENSDNOG00000048450PABPC1L6077.011ENSCJAG00000038506-10077.011Callithrix_jacchus
ENSDNOG00000048450PABPC1L9976.816ENSCAFG00000009573PABPC1L10076.816Canis_familiaris
ENSDNOG00000048450PABPC1L9989.621ENSCAFG00020013828PABPC1L9989.621Canis_lupus_dingo
ENSDNOG00000048450PABPC1L9787.291ENSCHIG00000025759PABPC1L9187.291Capra_hircus
ENSDNOG00000048450PABPC1L9986.297ENSTSYG00000006645PABPC1L9986.297Carlito_syrichta
ENSDNOG00000048450PABPC1L9979.562ENSCAPG00000014519PABPC1L9979.562Cavia_aperea
ENSDNOG00000048450PABPC1L9982.553ENSCPOG00000013633PABPC1L9982.553Cavia_porcellus
ENSDNOG00000048450PABPC1L9987.745ENSCCAG00000023338PABPC1L9987.745Cebus_capucinus
ENSDNOG00000048450PABPC1L9989.396ENSCATG00000034065PABPC1L9989.396Cercocebus_atys
ENSDNOG00000048450PABPC1L9981.260ENSCLAG00000005298PABPC1L9982.068Chinchilla_lanigera
ENSDNOG00000048450PABPC1L9989.233ENSCSAG00000014242PABPC1L9989.233Chlorocebus_sabaeus
ENSDNOG00000048450PABPC1L5381.061ENSCPBG00000007810-8181.061Chrysemys_picta_bellii
ENSDNOG00000048450PABPC1L7284.842ENSCPBG00000017755-9984.842Chrysemys_picta_bellii
ENSDNOG00000048450PABPC1L9749.595ENSCING00000002796-9750.203Ciona_intestinalis
ENSDNOG00000048450PABPC1L9859.933ENSCSAVG00000004246-9858.824Ciona_savignyi
ENSDNOG00000048450PABPC1L9758.696ENSCSAVG00000003102-10082.877Ciona_savignyi
ENSDNOG00000048450PABPC1L9985.370ENSCANG00000037530PABPC1L9985.370Colobus_angolensis_palliatus
ENSDNOG00000048450PABPC1L9976.461ENSCGRG00001021938Pabpc1l9976.461Cricetulus_griseus_chok1gshd
ENSDNOG00000048450PABPC1L9976.461ENSCGRG00000007946Pabpc1l9976.461Cricetulus_griseus_crigri
ENSDNOG00000048450PABPC1L9964.638ENSCSEG00000021295pabpc1l9964.638Cynoglossus_semilaevis
ENSDNOG00000048450PABPC1L9968.770ENSCVAG00000015943-8686.260Cyprinodon_variegatus
ENSDNOG00000048450PABPC1L9971.680ENSDARG00000002597pabpc1l8889.231Danio_rerio
ENSDNOG00000048450PABPC1L9985.294ENSDORG00000001067Pabpc1l9985.294Dipodomys_ordii
ENSDNOG00000048450PABPC1L9592.276ENSETEG00000009969PABPC1L7392.276Echinops_telfairi
ENSDNOG00000048450PABPC1L5878.049ENSEASG00005023407-8278.049Equus_asinus_asinus
ENSDNOG00000048450PABPC1L5995.833ENSEASG00005023408-10095.833Equus_asinus_asinus
ENSDNOG00000048450PABPC1L6789.520ENSECAG00000040139-8189.520Equus_caballus
ENSDNOG00000048450PABPC1L9983.770ENSEEUG00000005978PABPC1L9983.770Erinaceus_europaeus
ENSDNOG00000048450PABPC1L9971.019ENSELUG00000001811pabpc1l9971.019Esox_lucius
ENSDNOG00000048450PABPC1L9989.292ENSFCAG00000011692PABPC1L9989.292Felis_catus
ENSDNOG00000048450PABPC1L8478.776ENSFALG00000005372PABPC1L8878.776Ficedula_albicollis
ENSDNOG00000048450PABPC1L9982.085ENSFDAG00000008291PABPC1L9982.085Fukomys_damarensis
ENSDNOG00000048450PABPC1L9968.590ENSFHEG00000003398pabpc1l9968.590Fundulus_heteroclitus
ENSDNOG00000048450PABPC1L9970.921ENSGMOG00000004437pabpc1l9870.921Gadus_morhua
ENSDNOG00000048450PABPC1L9871.821ENSGALG00000004123PABPC1L9885.714Gallus_gallus
ENSDNOG00000048450PABPC1L9964.545ENSGAFG00000021057pabpc1l9964.545Gambusia_affinis
ENSDNOG00000048450PABPC1L9967.360ENSGACG00000002792pabpc1l9967.360Gasterosteus_aculeatus
ENSDNOG00000048450PABPC1L9978.457ENSGAGG00000000589PABPC1L9878.457Gopherus_agassizii
ENSDNOG00000048450PABPC1L9989.723ENSGGOG00000004584PABPC1L9989.723Gorilla_gorilla
ENSDNOG00000048450PABPC1L9967.783ENSHBUG00000006134pabpc1l9967.783Haplochromis_burtoni
ENSDNOG00000048450PABPC1L9983.683ENSHGLG00000008434PABPC1L9983.683Heterocephalus_glaber_female
ENSDNOG00000048450PABPC1L9983.683ENSHGLG00100012151PABPC1L9983.683Heterocephalus_glaber_male
ENSDNOG00000048450PABPC1L5982.022ENSHGLG00100019506-10082.022Heterocephalus_glaber_male
ENSDNOG00000048450PABPC1L9868.781ENSHCOG00000009270pabpc1l9968.781Hippocampus_comes
ENSDNOG00000048450PABPC1L6061.494ENSIPUG00000006780-8561.494Ictalurus_punctatus
ENSDNOG00000048450PABPC1L5361.538ENSIPUG00000005537-10061.538Ictalurus_punctatus
ENSDNOG00000048450PABPC1L9972.364ENSIPUG00000012602pabpc1l9972.364Ictalurus_punctatus
ENSDNOG00000048450PABPC1L5960.920ENSIPUG00000006760-8860.920Ictalurus_punctatus
ENSDNOG00000048450PABPC1L9987.439ENSSTOG00000003739PABPC1L9987.439Ictidomys_tridecemlineatus
ENSDNOG00000048450PABPC1L9869.358ENSJJAG00000022406Pabpc1l9966.174Jaculus_jaculus
ENSDNOG00000048450PABPC1L9968.871ENSKMAG00000016847pabpc1l9968.871Kryptolebias_marmoratus
ENSDNOG00000048450PABPC1L9967.594ENSLBEG00000010084pabpc1l9967.897Labrus_bergylta
ENSDNOG00000048450PABPC1L9970.932ENSLACG00000005762PABPC1L9972.628Latimeria_chalumnae
ENSDNOG00000048450PABPC1L9971.910ENSLOCG00000007519pabpc1l9871.910Lepisosteus_oculatus
ENSDNOG00000048450PABPC1L9986.560ENSLAFG00000003553PABPC1L10086.560Loxodonta_africana
ENSDNOG00000048450PABPC1L9989.723ENSMFAG00000040365PABPC1L9989.723Macaca_fascicularis
ENSDNOG00000048450PABPC1L9987.662ENSMNEG00000032298PABPC1L9987.662Macaca_nemestrina
ENSDNOG00000048450PABPC1L9989.396ENSMLEG00000043139PABPC1L9989.396Mandrillus_leucophaeus
ENSDNOG00000048450PABPC1L9767.715ENSMAMG00000011854pabpc1l9767.715Mastacembelus_armatus
ENSDNOG00000048450PABPC1L9967.943ENSMZEG00005023713pabpc1l9967.943Maylandia_zebra
ENSDNOG00000048450PABPC1L9976.661ENSMGAG00000003674PABPC1L9876.661Meleagris_gallopavo
ENSDNOG00000048450PABPC1L9975.163ENSMOCG00000013186Pabpc1l9975.163Microtus_ochrogaster
ENSDNOG00000048450PABPC1L9968.395ENSMMOG00000020574-9086.923Mola_mola
ENSDNOG00000048450PABPC1L9781.500ENSMODG00000016198PABPC1L9981.500Monodelphis_domestica
ENSDNOG00000048450PABPC1L9767.049ENSMALG00000021622pabpc1l10067.049Monopterus_albus
ENSDNOG00000048450PABPC1L9976.471MGP_CAROLIEiJ_G0024627Pabpc1l9976.471Mus_caroli
ENSDNOG00000048450PABPC1L9976.307ENSMUSG00000054582Pabpc1l9976.307Mus_musculus
ENSDNOG00000048450PABPC1L9976.183MGP_PahariEiJ_G0026071Pabpc1l9976.183Mus_pahari
ENSDNOG00000048450PABPC1L9976.471MGP_SPRETEiJ_G0025549Pabpc1l9976.471Mus_spretus
ENSDNOG00000048450PABPC1L9986.526ENSMPUG00000017646PABPC1L9986.526Mustela_putorius_furo
ENSDNOG00000048450PABPC1L9880.161ENSMLUG00000006324PABPC1L9780.161Myotis_lucifugus
ENSDNOG00000048450PABPC1L9980.065ENSNGAG00000010458Pabpc1l9980.065Nannospalax_galili
ENSDNOG00000048450PABPC1L9968.328ENSNBRG00000016633pabpc1l9975.000Neolamprologus_brichardi
ENSDNOG00000048450PABPC1L9969.331ENSMEUG00000007905-9969.331Notamacropus_eugenii
ENSDNOG00000048450PABPC1L9985.318ENSOPRG00000011846PABPC1L9985.318Ochotona_princeps
ENSDNOG00000048450PABPC1L5875.625ENSODEG00000002920-9775.625Octodon_degus
ENSDNOG00000048450PABPC1L9974.878ENSODEG00000015482PABPC1L9974.878Octodon_degus
ENSDNOG00000048450PABPC1L9967.943ENSONIG00000017314pabpc1l9967.943Oreochromis_niloticus
ENSDNOG00000048450PABPC1L8969.620ENSOANG00000015793-10069.620Ornithorhynchus_anatinus
ENSDNOG00000048450PABPC1L9978.528ENSOCUG00000003005PABPC1L10078.528Oryctolagus_cuniculus
ENSDNOG00000048450PABPC1L9968.558ENSORLG00000010322pabpc1l9976.923Oryzias_latipes
ENSDNOG00000048450PABPC1L9968.395ENSORLG00020021193pabpc1l9976.923Oryzias_latipes_hni
ENSDNOG00000048450PABPC1L9968.395ENSORLG00015017018pabpc1l9975.641Oryzias_latipes_hsok
ENSDNOG00000048450PABPC1L9965.396ENSOMEG00000010789pabpc1l9965.396Oryzias_melastigma
ENSDNOG00000048450PABPC1L9985.167ENSOGAG00000032999PABPC1L10085.167Otolemur_garnettii
ENSDNOG00000048450PABPC1L9987.276ENSOARG00000004578PABPC1L9987.276Ovis_aries
ENSDNOG00000048450PABPC1L9989.233ENSPPAG00000039677PABPC1L9989.233Pan_paniscus
ENSDNOG00000048450PABPC1L6382.407ENSPPRG00000019327-9882.407Panthera_pardus
ENSDNOG00000048450PABPC1L9889.517ENSPTIG00000006524PABPC1L9989.517Panthera_tigris_altaica
ENSDNOG00000048450PABPC1L6394.444ENSPTRG00000013531PABPC1L9994.444Pan_troglodytes
ENSDNOG00000048450PABPC1L9989.396ENSPANG00000018788PABPC1L9989.396Papio_anubis
ENSDNOG00000048450PABPC1L9972.669ENSPKIG00000007322pabpc1l9972.669Paramormyrops_kingsleyae
ENSDNOG00000048450PABPC1L5384.733ENSPKIG00000016810-9384.733Paramormyrops_kingsleyae
ENSDNOG00000048450PABPC1L6885.132ENSPSIG00000013289PABPC1L9985.132Pelodiscus_sinensis
ENSDNOG00000048450PABPC1L7268.812ENSPMGG00000023121-9368.812Periophthalmus_magnuspinnatus
ENSDNOG00000048450PABPC1L6385.606ENSPMGG00000023117pabpc1l9285.606Periophthalmus_magnuspinnatus
ENSDNOG00000048450PABPC1L9976.307ENSPEMG00000020671Pabpc1l9976.307Peromyscus_maniculatus_bairdii
ENSDNOG00000048450PABPC1L9969.368ENSPFOG00000013241pabpc1l9869.368Poecilia_formosa
ENSDNOG00000048450PABPC1L9967.994ENSPLAG00000017490-9967.994Poecilia_latipinna
ENSDNOG00000048450PABPC1L5387.692ENSPLAG00000023686-9287.692Poecilia_latipinna
ENSDNOG00000048450PABPC1L5387.692ENSPMEG00000009185-8887.692Poecilia_mexicana
ENSDNOG00000048450PABPC1L9968.530ENSPMEG00000007677pabpc1l9968.530Poecilia_mexicana
ENSDNOG00000048450PABPC1L6777.240ENSPREG00000015886pabpc1l9977.240Poecilia_reticulata
ENSDNOG00000048450PABPC1L9990.049ENSPPYG00000011042PABPC1L9990.049Pongo_abelii
ENSDNOG00000048450PABPC1L6293.750ENSPCAG00000011787-7593.750Procavia_capensis
ENSDNOG00000048450PABPC1L9987.479ENSPCOG00000020630PABPC1L9987.479Propithecus_coquereli
ENSDNOG00000048450PABPC1L9986.066ENSPVAG00000012663PABPC1L9986.066Pteropus_vampyrus
ENSDNOG00000048450PABPC1L9967.103ENSPNYG00000004101pabpc1l9975.000Pundamilia_nyererei
ENSDNOG00000048450PABPC1L9965.335ENSPNAG00000021248pabpc1l9965.335Pygocentrus_nattereri
ENSDNOG00000048450PABPC1L9975.851ENSRNOG00000012750Pabpc1l10075.851Rattus_norvegicus
ENSDNOG00000048450PABPC1L9989.560ENSRBIG00000035381PABPC1L9989.560Rhinopithecus_bieti
ENSDNOG00000048450PABPC1L9989.233ENSRROG00000044498PABPC1L9989.233Rhinopithecus_roxellana
ENSDNOG00000048450PABPC1L9987.439ENSSBOG00000009532-9987.439Saimiri_boliviensis_boliviensis
ENSDNOG00000048450PABPC1L9776.025ENSSHAG00000011446PABPC1L10076.025Sarcophilus_harrisii
ENSDNOG00000048450PABPC1L9972.756ENSSFOG00015017304pabpc1l9972.756Scleropages_formosus
ENSDNOG00000048450PABPC1L9967.363ENSSMAG00000010516pabpc1l9386.822Scophthalmus_maximus
ENSDNOG00000048450PABPC1L9968.750ENSSDUG00000014743pabpc1l9968.750Seriola_dumerili
ENSDNOG00000048450PABPC1L9975.060ENSSLDG00000006981pabpc1l9877.626Seriola_lalandi_dorsalis
ENSDNOG00000048450PABPC1L9975.762ENSSPUG00000004233PABPC1L9875.762Sphenodon_punctatus
ENSDNOG00000048450PABPC1L9965.950ENSSPAG00000017137pabpc1l9965.954Stegastes_partitus
ENSDNOG00000048450PABPC1L9986.184ENSSSCG00000007382PABPC1L9986.184Sus_scrofa
ENSDNOG00000048450PABPC1L9976.070ENSTGUG00000005114PABPC1L9976.070Taeniopygia_guttata
ENSDNOG00000048450PABPC1L9768.144ENSTRUG00000011085pabpc1l9768.144Takifugu_rubripes
ENSDNOG00000048450PABPC1L9965.600ENSTNIG00000017903pabpc1l9865.600Tetraodon_nigroviridis
ENSDNOG00000048450PABPC1L9494.521ENSTBEG00000002851PABPC1L8094.521Tupaia_belangeri
ENSDNOG00000048450PABPC1L9485.764ENSTTRG00000007618PABPC1L10085.811Tursiops_truncatus
ENSDNOG00000048450PABPC1L9986.326ENSUAMG00000017682PABPC1L9986.326Ursus_americanus
ENSDNOG00000048450PABPC1L6892.412ENSUMAG00000025436PABPC1L9492.412Ursus_maritimus
ENSDNOG00000048450PABPC1L9995.652ENSVVUG00000018939PABPC1L9995.652Vulpes_vulpes
ENSDNOG00000048450PABPC1L9971.314ENSXETG00000022831pabpc1l9871.314Xenopus_tropicalis
ENSDNOG00000048450PABPC1L9871.659ENSXCOG00000005459pabpc1l9982.979Xiphophorus_couchianus
ENSDNOG00000048450PABPC1L9968.153ENSXMAG00000017135pabpc1l9968.153Xiphophorus_maculatus

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