EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDNOG00000048989 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 339 bases
Position: chrJH567992.1:966972-967310
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000018829	LSM	PF01423.22	1.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000042215	-	339	-	ENSDNOP00000018829	112 (aa)	-	UPI0003CBE2E0

Gene Model

Click here to download ENSDNOG00000048989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000048989's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDNOG00000048989	-	59	51.515	ENSDNOG00000044848	-	83	51.515
ENSDNOG00000048989	-	55	48.387	ENSDNOG00000040186	-	67	48.387
ENSDNOG00000048989	-	90	94.059	ENSDNOG00000043775	-	65	94.059
ENSDNOG00000048989	-	72	80.247	ENSDNOG00000049373	-	75	76.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000048989	-	77	98.837	ENSG00000139343	SNRPF	100	98.837	Homo_sapiens
ENSDNOG00000048989	-	72	88.889	ENSAPOG00000003377	snrpf	64	87.805	Acanthochromis_polyacanthus
ENSDNOG00000048989	-	76	98.824	ENSAMEG00000002166	-	100	98.824	Ailuropoda_melanoleuca
ENSDNOG00000048989	-	68	88.158	ENSAMEG00000018718	-	87	89.333	Ailuropoda_melanoleuca
ENSDNOG00000048989	-	75	96.429	ENSACIG00000013216	snrpf	99	96.429	Amphilophus_citrinellus
ENSDNOG00000048989	-	75	96.429	ENSAOCG00000015108	snrpf	99	96.429	Amphiprion_ocellaris
ENSDNOG00000048989	-	75	96.429	ENSAPEG00000022022	snrpf	99	96.429	Amphiprion_percula
ENSDNOG00000048989	-	75	96.429	ENSATEG00000022625	snrpf	90	96.429	Anabas_testudineus
ENSDNOG00000048989	-	66	97.297	ENSACAG00000014073	SNRPF	87	94.737	Anolis_carolinensis
ENSDNOG00000048989	-	67	68.000	ENSANAG00000025860	-	85	68.000	Aotus_nancymaae
ENSDNOG00000048989	-	77	98.837	ENSANAG00000032845	SNRPF	100	98.837	Aotus_nancymaae
ENSDNOG00000048989	-	78	81.609	ENSANAG00000020297	-	74	81.609	Aotus_nancymaae
ENSDNOG00000048989	-	75	96.429	ENSACLG00000016066	snrpf	99	96.429	Astatotilapia_calliptera
ENSDNOG00000048989	-	67	93.333	ENSAMXG00000007421	snrpf	87	93.333	Astyanax_mexicanus
ENSDNOG00000048989	-	70	92.308	ENSBTAG00000050012	-	93	92.000	Bos_taurus
ENSDNOG00000048989	-	77	98.837	ENSBTAG00000016271	SNRPF	100	98.837	Bos_taurus
ENSDNOG00000048989	-	69	72.727	WBGene00004918	snr-5	85	75.000	Caenorhabditis_elegans
ENSDNOG00000048989	-	77	98.837	ENSCJAG00000002705	-	100	98.837	Callithrix_jacchus
ENSDNOG00000048989	-	65	91.781	ENSCAFG00000031151	-	87	92.000	Canis_familiaris
ENSDNOG00000048989	-	89	87.000	ENSCAFG00000006395	-	90	87.000	Canis_familiaris
ENSDNOG00000048989	-	65	91.781	ENSCAFG00020010823	-	87	92.000	Canis_lupus_dingo
ENSDNOG00000048989	-	70	89.744	ENSCAFG00020013161	-	74	98.571	Canis_lupus_dingo
ENSDNOG00000048989	-	72	92.593	ENSTSYG00000031636	-	61	94.521	Carlito_syrichta
ENSDNOG00000048989	-	67	86.667	ENSTSYG00000030635	-	87	86.667	Carlito_syrichta
ENSDNOG00000048989	-	67	92.105	ENSTSYG00000036502	-	87	92.105	Carlito_syrichta
ENSDNOG00000048989	-	76	98.824	ENSCAPG00000007242	SNRPF	100	98.824	Cavia_aperea
ENSDNOG00000048989	-	77	98.837	ENSCPOG00000013898	SNRPF	100	98.837	Cavia_porcellus
ENSDNOG00000048989	-	77	98.837	ENSCCAG00000037378	-	100	98.837	Cebus_capucinus
ENSDNOG00000048989	-	77	87.209	ENSCCAG00000033627	-	59	88.000	Cebus_capucinus
ENSDNOG00000048989	-	77	97.674	ENSCCAG00000017356	-	100	97.674	Cebus_capucinus
ENSDNOG00000048989	-	77	98.837	ENSCLAG00000007200	SNRPF	100	98.837	Chinchilla_lanigera
ENSDNOG00000048989	-	87	88.660	ENSCSAG00000003602	-	79	88.660	Chlorocebus_sabaeus
ENSDNOG00000048989	-	57	98.438	ENSCHOG00000009392	SNRPF	100	98.438	Choloepus_hoffmanni
ENSDNOG00000048989	-	77	88.372	ENSCPBG00000026463	-	87	89.333	Chrysemys_picta_bellii
ENSDNOG00000048989	-	67	90.667	ENSCPBG00000006227	-	87	90.667	Chrysemys_picta_bellii
ENSDNOG00000048989	-	90	81.188	ENSCPBG00000024287	-	73	81.111	Chrysemys_picta_bellii
ENSDNOG00000048989	-	77	87.209	ENSCPBG00000001985	-	89	89.333	Chrysemys_picta_bellii
ENSDNOG00000048989	-	79	84.091	ENSCSAVG00000007498	-	88	85.714	Ciona_savignyi
ENSDNOG00000048989	-	77	98.837	ENSCGRG00001017100	-	100	98.837	Cricetulus_griseus_chok1gshd
ENSDNOG00000048989	-	67	90.667	ENSCGRG00001008965	-	58	90.667	Cricetulus_griseus_chok1gshd
ENSDNOG00000048989	-	71	91.250	ENSCGRG00000018878	-	94	90.667	Cricetulus_griseus_crigri
ENSDNOG00000048989	-	77	98.837	ENSCGRG00000000336	-	100	98.837	Cricetulus_griseus_crigri
ENSDNOG00000048989	-	67	94.667	ENSCSEG00000004748	snrpf	87	94.667	Cynoglossus_semilaevis
ENSDNOG00000048989	-	66	95.946	ENSCVAG00000000397	snrpf	60	93.421	Cyprinodon_variegatus
ENSDNOG00000048989	-	77	94.318	ENSDARG00000105037	snrpf	100	94.318	Danio_rerio
ENSDNOG00000048989	-	64	87.500	ENSDORG00000025351	-	100	87.500	Dipodomys_ordii
ENSDNOG00000048989	-	63	97.143	ENSDORG00000029740	-	85	97.143	Dipodomys_ordii
ENSDNOG00000048989	-	75	78.571	FBgn0000426	SmF	83	82.192	Drosophila_melanogaster
ENSDNOG00000048989	-	77	98.837	ENSETEG00000001558	-	100	98.837	Echinops_telfairi
ENSDNOG00000048989	-	72	75.309	ENSEBUG00000001793	-	72	85.075	Eptatretus_burgeri
ENSDNOG00000048989	-	87	90.722	ENSECAG00000019817	SNRPF	79	90.722	Equus_caballus
ENSDNOG00000048989	-	76	98.824	ENSEEUG00000013509	SNRPF	100	98.824	Erinaceus_europaeus
ENSDNOG00000048989	-	67	93.333	ENSELUG00000003121	RUXF	87	93.333	Esox_lucius
ENSDNOG00000048989	-	77	90.698	ENSELUG00000007737	RUXF	86	92.000	Esox_lucius
ENSDNOG00000048989	-	77	98.837	ENSFCAG00000029966	-	100	98.837	Felis_catus
ENSDNOG00000048989	-	93	69.231	ENSFCAG00000031148	-	91	66.667	Felis_catus
ENSDNOG00000048989	-	67	74.667	ENSFCAG00000021942	-	87	74.667	Felis_catus
ENSDNOG00000048989	-	76	98.824	ENSFALG00000010799	SNRPF	99	98.824	Ficedula_albicollis
ENSDNOG00000048989	-	77	98.837	ENSFDAG00000002831	-	100	98.837	Fukomys_damarensis
ENSDNOG00000048989	-	69	92.208	ENSFHEG00000003240	snrpf	68	92.208	Fundulus_heteroclitus
ENSDNOG00000048989	-	76	96.471	ENSGMOG00000007741	snrpf	100	96.471	Gadus_morhua
ENSDNOG00000048989	-	77	98.837	ENSGALG00000011409	SNRPF	100	98.837	Gallus_gallus
ENSDNOG00000048989	-	75	96.429	ENSGAFG00000016187	snrpf	97	96.429	Gambusia_affinis
ENSDNOG00000048989	-	66	94.595	ENSGACG00000020055	snrpf	87	94.595	Gasterosteus_aculeatus
ENSDNOG00000048989	-	56	93.651	ENSGAGG00000020974	-	54	92.188	Gopherus_agassizii
ENSDNOG00000048989	-	71	89.873	ENSGAGG00000022991	-	80	92.647	Gopherus_agassizii
ENSDNOG00000048989	-	79	89.773	ENSGAGG00000012945	-	71	92.208	Gopherus_agassizii
ENSDNOG00000048989	-	54	91.667	ENSGAGG00000011163	-	100	91.667	Gopherus_agassizii
ENSDNOG00000048989	-	62	85.507	ENSGAGG00000014132	-	83	85.507	Gopherus_agassizii
ENSDNOG00000048989	-	77	98.837	ENSGGOG00000001127	-	100	98.837	Gorilla_gorilla
ENSDNOG00000048989	-	75	79.762	ENSGGOG00000039936	-	83	77.333	Gorilla_gorilla
ENSDNOG00000048989	-	71	74.684	ENSGGOG00000039564	-	90	73.333	Gorilla_gorilla
ENSDNOG00000048989	-	77	97.674	ENSHGLG00000021172	-	100	97.674	Heterocephalus_glaber_female
ENSDNOG00000048989	-	77	98.837	ENSHGLG00000009108	SNRPF	100	98.837	Heterocephalus_glaber_female
ENSDNOG00000048989	-	77	97.674	ENSHGLG00100019596	-	100	97.674	Heterocephalus_glaber_male
ENSDNOG00000048989	-	76	98.824	ENSHGLG00100008103	-	100	98.824	Heterocephalus_glaber_male
ENSDNOG00000048989	-	56	84.286	ENSHCOG00000018663	snrpf	55	84.286	Hippocampus_comes
ENSDNOG00000048989	-	77	96.512	ENSIPUG00000018994	snrpf	100	96.512	Ictalurus_punctatus
ENSDNOG00000048989	-	77	98.837	ENSSTOG00000010434	-	100	98.837	Ictidomys_tridecemlineatus
ENSDNOG00000048989	-	77	86.047	ENSJJAG00000010502	-	89	88.000	Jaculus_jaculus
ENSDNOG00000048989	-	77	98.837	ENSJJAG00000011272	-	100	98.837	Jaculus_jaculus
ENSDNOG00000048989	-	77	80.233	ENSJJAG00000004558	-	89	81.333	Jaculus_jaculus
ENSDNOG00000048989	-	59	93.939	ENSJJAG00000004828	-	98	93.939	Jaculus_jaculus
ENSDNOG00000048989	-	67	94.667	ENSKMAG00000013566	snrpf	87	94.667	Kryptolebias_marmoratus
ENSDNOG00000048989	-	67	94.667	ENSLBEG00000008800	snrpf	87	94.667	Labrus_bergylta
ENSDNOG00000048989	-	88	77.778	ENSLACG00000002456	-	85	77.778	Latimeria_chalumnae
ENSDNOG00000048989	-	67	93.333	ENSLOCG00000015744	snrpf	87	93.333	Lepisosteus_oculatus
ENSDNOG00000048989	-	76	98.824	ENSLAFG00000017426	SNRPF	99	98.824	Loxodonta_africana
ENSDNOG00000048989	-	65	94.521	ENSMAMG00000016593	snrpf	86	94.521	Mastacembelus_armatus
ENSDNOG00000048989	-	75	96.429	ENSMZEG00005014701	snrpf	99	96.429	Maylandia_zebra
ENSDNOG00000048989	-	76	87.059	ENSMGAG00000011453	-	77	87.059	Meleagris_gallopavo
ENSDNOG00000048989	-	66	98.649	ENSMAUG00000016909	-	100	98.649	Mesocricetus_auratus
ENSDNOG00000048989	-	54	93.443	ENSMAUG00000010289	-	76	93.443	Mesocricetus_auratus
ENSDNOG00000048989	-	67	93.333	ENSMAUG00000008799	-	87	93.333	Mesocricetus_auratus
ENSDNOG00000048989	-	66	98.649	ENSMAUG00000019737	-	100	98.649	Mesocricetus_auratus
ENSDNOG00000048989	-	87	85.567	ENSMICG00000030494	-	78	85.567	Microcebus_murinus
ENSDNOG00000048989	-	77	98.837	ENSMICG00000012153	-	100	98.837	Microcebus_murinus
ENSDNOG00000048989	-	77	98.837	ENSMOCG00000020437	Snrpf	100	98.837	Microtus_ochrogaster
ENSDNOG00000048989	-	61	82.353	ENSMOCG00000020220	-	87	82.353	Microtus_ochrogaster
ENSDNOG00000048989	-	67	85.333	ENSMOCG00000022166	-	82	85.333	Microtus_ochrogaster
ENSDNOG00000048989	-	76	95.294	ENSMMOG00000007127	snrpf	100	95.294	Mola_mola
ENSDNOG00000048989	-	80	89.011	ENSMODG00000008091	SNRPF	80	89.011	Monodelphis_domestica
ENSDNOG00000048989	-	75	96.429	ENSMALG00000012328	snrpf	99	96.429	Monopterus_albus
ENSDNOG00000048989	-	77	98.837	MGP_CAROLIEiJ_G0015735	-	100	98.837	Mus_caroli
ENSDNOG00000048989	-	77	98.837	ENSMUSG00000020018	Snrpf	100	98.837	Mus_musculus
ENSDNOG00000048989	-	77	98.837	MGP_PahariEiJ_G0031350	Snrpf	100	98.837	Mus_pahari
ENSDNOG00000048989	-	77	98.837	MGP_SPRETEiJ_G0016553	Snrpf	100	98.837	Mus_spretus
ENSDNOG00000048989	-	87	85.567	ENSMPUG00000007176	-	87	85.567	Mustela_putorius_furo
ENSDNOG00000048989	-	76	98.824	ENSMLUG00000013577	-	100	98.824	Myotis_lucifugus
ENSDNOG00000048989	-	80	92.222	ENSMLUG00000026149	-	85	92.222	Myotis_lucifugus
ENSDNOG00000048989	-	84	75.532	ENSMLUG00000026269	-	78	73.494	Myotis_lucifugus
ENSDNOG00000048989	-	80	93.333	ENSMLUG00000027932	-	85	93.333	Myotis_lucifugus
ENSDNOG00000048989	-	80	92.222	ENSMLUG00000029201	-	85	92.222	Myotis_lucifugus
ENSDNOG00000048989	-	77	98.837	ENSNGAG00000024292	-	100	98.837	Nannospalax_galili
ENSDNOG00000048989	-	56	88.889	ENSNGAG00000005851	-	71	88.333	Nannospalax_galili
ENSDNOG00000048989	-	70	91.026	ENSNBRG00000011682	snrpf	80	91.026	Neolamprologus_brichardi
ENSDNOG00000048989	-	66	68.919	ENSMEUG00000000671	SNRPF	87	68.919	Notamacropus_eugenii
ENSDNOG00000048989	-	77	98.837	ENSODEG00000010328	-	100	98.837	Octodon_degus
ENSDNOG00000048989	-	86	82.474	ENSOCUG00000010925	SNRPF	86	82.474	Oryctolagus_cuniculus
ENSDNOG00000048989	-	66	93.243	ENSORLG00020008216	snrpf	87	93.243	Oryzias_latipes_hni
ENSDNOG00000048989	-	66	93.243	ENSORLG00015007418	snrpf	87	93.243	Oryzias_latipes_hsok
ENSDNOG00000048989	-	65	94.521	ENSOMEG00000003018	snrpf	86	94.521	Oryzias_melastigma
ENSDNOG00000048989	-	77	96.512	ENSOGAG00000030323	-	100	96.512	Otolemur_garnettii
ENSDNOG00000048989	-	88	82.524	ENSOARG00000011853	-	90	82.524	Ovis_aries
ENSDNOG00000048989	-	71	74.684	ENSPPAG00000037479	-	91	73.333	Pan_paniscus
ENSDNOG00000048989	-	75	79.762	ENSPPAG00000037544	-	83	77.333	Pan_paniscus
ENSDNOG00000048989	-	75	76.190	ENSPPRG00000007449	-	77	76.000	Panthera_pardus
ENSDNOG00000048989	-	77	98.837	ENSPPRG00000005875	-	100	98.837	Panthera_pardus
ENSDNOG00000048989	-	75	78.571	ENSPTIG00000005117	-	89	76.000	Panthera_tigris_altaica
ENSDNOG00000048989	-	77	98.837	ENSPTIG00000007520	SNRPF	100	98.837	Panthera_tigris_altaica
ENSDNOG00000048989	-	75	79.762	ENSPTRG00000043814	-	83	77.333	Pan_troglodytes
ENSDNOG00000048989	-	71	74.684	ENSPTRG00000047717	-	91	73.333	Pan_troglodytes
ENSDNOG00000048989	-	76	96.471	ENSPKIG00000014784	snrpf	93	96.471	Paramormyrops_kingsleyae
ENSDNOG00000048989	-	76	98.824	ENSPSIG00000016462	SNRPF	99	98.824	Pelodiscus_sinensis
ENSDNOG00000048989	-	76	95.294	ENSPMGG00000023548	snrpf	100	95.294	Periophthalmus_magnuspinnatus
ENSDNOG00000048989	-	77	98.837	ENSPEMG00000023326	Snrpf	100	98.837	Peromyscus_maniculatus_bairdii
ENSDNOG00000048989	-	75	96.429	ENSPLAG00000023932	snrpf	99	96.429	Poecilia_latipinna
ENSDNOG00000048989	-	75	96.429	ENSPMEG00000003377	snrpf	99	96.429	Poecilia_mexicana
ENSDNOG00000048989	-	75	96.429	ENSPREG00000022635	snrpf	97	96.429	Poecilia_reticulata
ENSDNOG00000048989	-	77	98.837	ENSPPYG00000004847	-	100	98.837	Pongo_abelii
ENSDNOG00000048989	-	77	98.837	ENSPCOG00000023833	-	100	98.837	Propithecus_coquereli
ENSDNOG00000048989	-	77	98.837	ENSPVAG00000009036	SNRPF	100	98.837	Pteropus_vampyrus
ENSDNOG00000048989	-	75	96.429	ENSPNYG00000021712	snrpf	99	96.429	Pundamilia_nyererei
ENSDNOG00000048989	-	65	94.521	ENSPNAG00000019117	snrpf	86	94.521	Pygocentrus_nattereri
ENSDNOG00000048989	-	77	98.837	ENSRNOG00000005556	Snrpf	100	98.837	Rattus_norvegicus
ENSDNOG00000048989	-	67	96.000	ENSRBIG00000030414	-	87	96.000	Rhinopithecus_bieti
ENSDNOG00000048989	-	67	96.000	ENSRROG00000021975	-	87	96.000	Rhinopithecus_roxellana
ENSDNOG00000048989	-	63	59.155	YPR182W	SMX3	83	59.155	Saccharomyces_cerevisiae
ENSDNOG00000048989	-	67	84.000	ENSSBOG00000032297	-	86	84.000	Saimiri_boliviensis_boliviensis
ENSDNOG00000048989	-	70	80.247	ENSSBOG00000027638	-	91	80.247	Saimiri_boliviensis_boliviensis
ENSDNOG00000048989	-	77	97.674	ENSSBOG00000012868	-	100	97.674	Saimiri_boliviensis_boliviensis
ENSDNOG00000048989	-	77	98.837	ENSSBOG00000036179	-	100	98.837	Saimiri_boliviensis_boliviensis
ENSDNOG00000048989	-	78	89.655	ENSSHAG00000012294	SNRPF	78	89.655	Sarcophilus_harrisii
ENSDNOG00000048989	-	57	95.312	ENSSFOG00015021523	snrpf	96	95.312	Scleropages_formosus
ENSDNOG00000048989	-	68	92.105	ENSSMAG00000005533	snrpf	87	92.105	Scophthalmus_maximus
ENSDNOG00000048989	-	58	95.385	ENSSDUG00000016283	snrpf	77	95.385	Seriola_dumerili
ENSDNOG00000048989	-	67	94.667	ENSSLDG00000005119	snrpf	87	94.667	Seriola_lalandi_dorsalis
ENSDNOG00000048989	-	71	73.750	ENSSLDG00000003885	-	90	77.027	Seriola_lalandi_dorsalis
ENSDNOG00000048989	-	75	98.810	ENSSPUG00000014590	-	99	98.810	Sphenodon_punctatus
ENSDNOG00000048989	-	76	96.471	ENSSPAG00000003283	snrpf	97	96.471	Stegastes_partitus
ENSDNOG00000048989	-	77	98.837	ENSSSCG00000000895	SNRPF	100	98.837	Sus_scrofa
ENSDNOG00000048989	-	52	93.103	ENSTRUG00000014956	snrpf	84	93.103	Takifugu_rubripes
ENSDNOG00000048989	-	67	94.667	ENSTNIG00000012672	snrpf	87	94.667	Tetraodon_nigroviridis
ENSDNOG00000048989	-	67	69.333	ENSTTRG00000006070	SNRPF	87	69.333	Tursiops_truncatus
ENSDNOG00000048989	-	77	86.047	ENSUAMG00000001101	-	88	88.000	Ursus_americanus
ENSDNOG00000048989	-	77	98.837	ENSUAMG00000008176	-	100	98.837	Ursus_americanus
ENSDNOG00000048989	-	67	88.000	ENSUMAG00000006177	-	88	88.000	Ursus_maritimus
ENSDNOG00000048989	-	77	98.837	ENSUMAG00000003528	-	100	98.837	Ursus_maritimus
ENSDNOG00000048989	-	77	98.837	ENSVPAG00000008712	-	100	98.837	Vicugna_pacos
ENSDNOG00000048989	-	70	93.590	ENSVVUG00000023821	-	96	93.333	Vulpes_vulpes
ENSDNOG00000048989	-	66	73.684	ENSXETG00000021630	snrpf	87	73.684	Xenopus_tropicalis
ENSDNOG00000048989	-	75	96.429	ENSXCOG00000013860	snrpf	97	96.429	Xiphophorus_couchianus
ENSDNOG00000048989	-	75	96.429	ENSXMAG00000015448	snrpf	99	96.429	Xiphophorus_maculatus