EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDNOG00000049619 (Gene tree)
Gene ID: 101441449
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Dasypus_novemcinctus
Status: putative
Strand: Minus strand
Length: 9638 bases
Position: chrJH575811.1:50882-60519
Accession: 101441449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDNOP00000025348	MBD	PF01429.19	1.1e-21	1	1
ENSDNOP00000032553	MBD	PF01429.19	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDNOT00000050114	MBD4-202	3766	-	ENSDNOP00000032553	578 (aa)	XP_012374589	UPI0003CBFF25
ENSDNOT00000044889	MBD4-201	2650	-	ENSDNOP00000025348	567 (aa)	XP_004477293	UPI00032923F4

Gene Model

Click here to download ENSDNOG00000049619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDNOG00000049619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDNOG00000049619	MBD4	100	76.748	ENSG00000129071	MBD4	98	78.448	Homo_sapiens
ENSDNOG00000049619	MBD4	100	75.916	ENSAMEG00000004562	MBD4	99	75.916	Ailuropoda_melanoleuca
ENSDNOG00000049619	MBD4	54	60.976	ENSAOCG00000001157	mbd4	95	42.656	Amphiprion_ocellaris
ENSDNOG00000049619	MBD4	51	64.545	ENSAPEG00000016131	mbd4	95	42.715	Amphiprion_percula
ENSDNOG00000049619	MBD4	87	44.902	ENSACAG00000014733	MBD4	89	44.902	Anolis_carolinensis
ENSDNOG00000049619	MBD4	100	68.761	ENSBTAG00000021645	MBD4	100	68.761	Bos_taurus
ENSDNOG00000049619	MBD4	100	73.124	ENSCJAG00000017293	MBD4	99	73.124	Callithrix_jacchus
ENSDNOG00000049619	MBD4	100	77.352	ENSCAFG00000004867	MBD4	99	77.352	Canis_familiaris
ENSDNOG00000049619	MBD4	100	77.352	ENSCAFG00020007082	MBD4	99	77.352	Canis_lupus_dingo
ENSDNOG00000049619	MBD4	100	68.935	ENSCHIG00000009760	MBD4	100	68.935	Capra_hircus
ENSDNOG00000049619	MBD4	100	75.261	ENSCCAG00000029796	MBD4	99	75.261	Cebus_capucinus
ENSDNOG00000049619	MBD4	100	76.357	ENSCATG00000035211	MBD4	99	76.357	Cercocebus_atys
ENSDNOG00000049619	MBD4	100	67.133	ENSCLAG00000008974	MBD4	100	67.133	Chinchilla_lanigera
ENSDNOG00000049619	MBD4	100	76.182	ENSCSAG00000009037	MBD4	99	76.182	Chlorocebus_sabaeus
ENSDNOG00000049619	MBD4	87	50.476	ENSCPBG00000014704	MBD4	89	50.476	Chrysemys_picta_bellii
ENSDNOG00000049619	MBD4	100	76.182	ENSCANG00000007120	MBD4	99	76.182	Colobus_angolensis_palliatus
ENSDNOG00000049619	MBD4	100	64.386	ENSCGRG00001003507	Mbd4	100	64.737	Cricetulus_griseus_chok1gshd
ENSDNOG00000049619	MBD4	100	64.386	ENSCGRG00000010974	Mbd4	100	64.737	Cricetulus_griseus_crigri
ENSDNOG00000049619	MBD4	81	62.069	ENSDORG00000000902	-	98	61.345	Dipodomys_ordii
ENSDNOG00000049619	MBD4	86	38.384	ENSEBUG00000010816	mbd4	98	38.384	Eptatretus_burgeri
ENSDNOG00000049619	MBD4	100	76.789	ENSEASG00005014800	MBD4	100	76.789	Equus_asinus_asinus
ENSDNOG00000049619	MBD4	100	76.440	ENSECAG00000022106	MBD4	100	76.440	Equus_caballus
ENSDNOG00000049619	MBD4	91	61.877	ENSEEUG00000011459	MBD4	97	61.877	Erinaceus_europaeus
ENSDNOG00000049619	MBD4	100	75.916	ENSFCAG00000000083	MBD4	99	75.916	Felis_catus
ENSDNOG00000049619	MBD4	82	44.286	ENSFALG00000013663	MBD4	99	44.554	Ficedula_albicollis
ENSDNOG00000049619	MBD4	86	42.254	ENSGMOG00000013830	mbd4	100	42.254	Gadus_morhua
ENSDNOG00000049619	MBD4	87	51.644	ENSGAGG00000018644	MBD4	89	51.644	Gopherus_agassizii
ENSDNOG00000049619	MBD4	100	75.652	ENSGGOG00000010698	MBD4	99	75.652	Gorilla_gorilla
ENSDNOG00000049619	MBD4	100	68.182	ENSHGLG00000009034	MBD4	100	68.182	Heterocephalus_glaber_female
ENSDNOG00000049619	MBD4	100	68.357	ENSHGLG00100000135	MBD4	100	68.357	Heterocephalus_glaber_male
ENSDNOG00000049619	MBD4	100	70.351	ENSSTOG00000020663	MBD4	100	70.351	Ictidomys_tridecemlineatus
ENSDNOG00000049619	MBD4	99	71.701	ENSLAFG00000010609	MBD4	99	71.701	Loxodonta_africana
ENSDNOG00000049619	MBD4	99	76.842	ENSMFAG00000002266	MBD4	99	76.842	Macaca_fascicularis
ENSDNOG00000049619	MBD4	99	76.000	ENSMMUG00000012723	MBD4	99	76.000	Macaca_mulatta
ENSDNOG00000049619	MBD4	96	75.641	ENSMNEG00000029752	MBD4	99	75.641	Macaca_nemestrina
ENSDNOG00000049619	MBD4	100	75.832	ENSMLEG00000024859	MBD4	99	75.832	Mandrillus_leucophaeus
ENSDNOG00000049619	MBD4	100	75.567	ENSMICG00000008022	MBD4	99	75.567	Microcebus_murinus
ENSDNOG00000049619	MBD4	67	49.347	ENSMOCG00000002466	-	95	49.347	Microtus_ochrogaster
ENSDNOG00000049619	MBD4	87	59.319	ENSMODG00000006399	-	99	59.319	Monodelphis_domestica
ENSDNOG00000049619	MBD4	87	42.800	ENSMALG00000021517	mbd4	87	42.800	Monopterus_albus
ENSDNOG00000049619	MBD4	100	64.983	MGP_CAROLIEiJ_G0028760	Mbd4	100	64.983	Mus_caroli
ENSDNOG00000049619	MBD4	100	64.460	ENSMUSG00000030322	Mbd4	100	64.460	Mus_musculus
ENSDNOG00000049619	MBD4	100	64.049	MGP_PahariEiJ_G0022511	-	100	64.049	Mus_pahari
ENSDNOG00000049619	MBD4	100	63.763	MGP_SPRETEiJ_G0029788	Mbd4	100	63.763	Mus_spretus
ENSDNOG00000049619	MBD4	100	74.737	ENSMPUG00000017195	MBD4	99	74.737	Mustela_putorius_furo
ENSDNOG00000049619	MBD4	94	78.545	ENSMLUG00000014766	MBD4	98	78.545	Myotis_lucifugus
ENSDNOG00000049619	MBD4	100	76.265	ENSNLEG00000005337	MBD4	99	76.265	Nomascus_leucogenys
ENSDNOG00000049619	MBD4	51	95.652	ENSMEUG00000015599	-	73	95.652	Notamacropus_eugenii
ENSDNOG00000049619	MBD4	100	64.223	ENSOPRG00000000473	MBD4	99	64.223	Ochotona_princeps
ENSDNOG00000049619	MBD4	50	72.277	ENSONIG00000017212	mbd4	72	71.014	Oreochromis_niloticus
ENSDNOG00000049619	MBD4	68	49.490	ENSOANG00000004589	-	89	49.492	Ornithorhynchus_anatinus
ENSDNOG00000049619	MBD4	100	64.298	ENSOCUG00000013006	MBD4	99	64.298	Oryctolagus_cuniculus
ENSDNOG00000049619	MBD4	57	78.698	ENSORLG00020020013	mbd4	77	78.698	Oryzias_latipes_hni
ENSDNOG00000049619	MBD4	100	72.077	ENSOGAG00000010236	MBD4	100	72.077	Otolemur_garnettii
ENSDNOG00000049619	MBD4	100	68.935	ENSOARG00000014699	MBD4	100	68.935	Ovis_aries
ENSDNOG00000049619	MBD4	100	76.399	ENSPPAG00000036528	MBD4	99	76.399	Pan_paniscus
ENSDNOG00000049619	MBD4	100	75.614	ENSPPRG00000016480	MBD4	99	75.614	Panthera_pardus
ENSDNOG00000049619	MBD4	100	76.174	ENSPTRG00000015377	MBD4	99	76.174	Pan_troglodytes
ENSDNOG00000049619	MBD4	100	75.958	ENSPANG00000015047	MBD4	99	75.958	Papio_anubis
ENSDNOG00000049619	MBD4	87	49.526	ENSPSIG00000007892	MBD4	88	49.526	Pelodiscus_sinensis
ENSDNOG00000049619	MBD4	94	57.328	ENSPEMG00000006226	Mbd4	99	58.011	Peromyscus_maniculatus_bairdii
ENSDNOG00000049619	MBD4	91	57.765	ENSPCIG00000002276	-	99	57.765	Phascolarctos_cinereus
ENSDNOG00000049619	MBD4	100	76.182	ENSPPYG00000013417	MBD4	99	76.182	Pongo_abelii
ENSDNOG00000049619	MBD4	96	71.168	ENSPCAG00000012915	MBD4	99	71.168	Procavia_capensis
ENSDNOG00000049619	MBD4	100	77.622	ENSPVAG00000005238	MBD4	99	77.622	Pteropus_vampyrus
ENSDNOG00000049619	MBD4	100	65.858	ENSRNOG00000010919	Mbd4	100	65.858	Rattus_norvegicus
ENSDNOG00000049619	MBD4	100	76.357	ENSRBIG00000027722	MBD4	99	76.357	Rhinopithecus_bieti
ENSDNOG00000049619	MBD4	100	76.182	ENSRROG00000029136	MBD4	99	76.182	Rhinopithecus_roxellana
ENSDNOG00000049619	MBD4	100	73.822	ENSSBOG00000016810	MBD4	99	73.822	Saimiri_boliviensis_boliviensis
ENSDNOG00000049619	MBD4	94	57.807	ENSSHAG00000012953	MBD4	94	57.807	Sarcophilus_harrisii
ENSDNOG00000049619	MBD4	81	60.991	ENSSARG00000004496	-	80	60.991	Sorex_araneus
ENSDNOG00000049619	MBD4	87	51.373	ENSSPUG00000017344	MBD4	91	51.373	Sphenodon_punctatus
ENSDNOG00000049619	MBD4	100	72.426	ENSSSCG00000033303	MBD4	100	72.426	Sus_scrofa
ENSDNOG00000049619	MBD4	74	91.837	ENSTBEG00000003041	-	74	91.837	Tupaia_belangeri
ENSDNOG00000049619	MBD4	95	75.641	ENSTTRG00000011265	MBD4	97	75.641	Tursiops_truncatus
ENSDNOG00000049619	MBD4	87	78.000	ENSUAMG00000000814	MBD4	100	78.000	Ursus_americanus
ENSDNOG00000049619	MBD4	100	76.091	ENSUMAG00000017542	MBD4	100	76.091	Ursus_maritimus
ENSDNOG00000049619	MBD4	67	68.224	ENSVPAG00000004040	-	69	68.224	Vicugna_pacos
ENSDNOG00000049619	MBD4	100	76.307	ENSVVUG00000014222	MBD4	99	76.307	Vulpes_vulpes
ENSDNOG00000049619	MBD4	50	66.204	ENSXMAG00000021129	mbd4	65	66.204	Xiphophorus_maculatus