EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000000127 (Gene tree)
Gene ID: 105995282
Gene Symbol: Ddb1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 32214 bases
Position: chrKN672463.1:1483046-1515259
Accession: 105995282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000022416	CPSF_A	PF03178.15	1e-85	1	1
ENSDORP00000000116	CPSF_A	PF03178.15	5.8e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000000128	-	3078	-	ENSDORP00000000116	1025 (aa)	-	UPI000BAD2B57
ENSDORT00000031391	-	3729	XM_013028990	ENSDORP00000022416	953 (aa)	XP_012884444	A0A1S3G857

Gene Model

Click here to download ENSDORG00000000127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000000127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000000127	Ddb1	100	100.000	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSDORG00000000127	Ddb1	97	95.000	ENSAPOG00000005036	ddb1	81	95.000	Acanthochromis_polyacanthus
ENSDORG00000000127	Ddb1	100	100.000	ENSAMEG00000016518	DDB1	84	100.000	Ailuropoda_melanoleuca
ENSDORG00000000127	Ddb1	83	95.000	ENSACIG00000020624	ddb1	81	95.000	Amphilophus_citrinellus
ENSDORG00000000127	Ddb1	100	95.000	ENSAOCG00000003066	ddb1	84	95.000	Amphiprion_ocellaris
ENSDORG00000000127	Ddb1	100	95.455	ENSAPEG00000000092	ddb1	84	95.455	Amphiprion_percula
ENSDORG00000000127	Ddb1	93	95.000	ENSATEG00000020571	ddb1	81	95.000	Anabas_testudineus
ENSDORG00000000127	Ddb1	98	96.065	ENSAPLG00000007174	DDB1	89	89.214	Anas_platyrhynchos
ENSDORG00000000127	Ddb1	100	97.285	ENSACAG00000017758	DDB1	84	97.285	Anolis_carolinensis
ENSDORG00000000127	Ddb1	100	100.000	ENSANAG00000021878	DDB1	84	100.000	Aotus_nancymaae
ENSDORG00000000127	Ddb1	100	95.000	ENSACLG00000012401	ddb1	84	95.000	Astatotilapia_calliptera
ENSDORG00000000127	Ddb1	100	100.000	ENSBTAG00000021569	DDB1	78	100.000	Bos_taurus
ENSDORG00000000127	Ddb1	100	36.016	WBGene00010890	ddb-1	84	35.884	Caenorhabditis_elegans
ENSDORG00000000127	Ddb1	100	100.000	ENSCJAG00000019319	DDB1	84	100.000	Callithrix_jacchus
ENSDORG00000000127	Ddb1	100	100.000	ENSCAFG00000016264	DDB1	84	100.000	Canis_familiaris
ENSDORG00000000127	Ddb1	93	100.000	ENSCAFG00020012722	DDB1	82	100.000	Canis_lupus_dingo
ENSDORG00000000127	Ddb1	100	100.000	ENSCHIG00000014969	DDB1	84	100.000	Capra_hircus
ENSDORG00000000127	Ddb1	100	99.548	ENSTSYG00000008027	DDB1	84	99.548	Carlito_syrichta
ENSDORG00000000127	Ddb1	99	98.229	ENSCAPG00000010786	DDB1	83	99.000	Cavia_aperea
ENSDORG00000000127	Ddb1	100	99.095	ENSCPOG00000009956	DDB1	84	99.095	Cavia_porcellus
ENSDORG00000000127	Ddb1	100	100.000	ENSCCAG00000035883	DDB1	84	100.000	Cebus_capucinus
ENSDORG00000000127	Ddb1	100	100.000	ENSCATG00000044495	DDB1	93	100.000	Cercocebus_atys
ENSDORG00000000127	Ddb1	100	99.548	ENSCLAG00000004126	DDB1	84	99.548	Chinchilla_lanigera
ENSDORG00000000127	Ddb1	100	100.000	ENSCSAG00000006392	DDB1	84	100.000	Chlorocebus_sabaeus
ENSDORG00000000127	Ddb1	84	98.361	ENSCHOG00000011377	DDB1	73	98.361	Choloepus_hoffmanni
ENSDORG00000000127	Ddb1	100	98.643	ENSCPBG00000017728	DDB1	84	98.643	Chrysemys_picta_bellii
ENSDORG00000000127	Ddb1	100	61.062	ENSCING00000007437	-	84	61.062	Ciona_intestinalis
ENSDORG00000000127	Ddb1	93	58.228	ENSCSAVG00000004783	-	84	59.060	Ciona_savignyi
ENSDORG00000000127	Ddb1	100	100.000	ENSCANG00000019948	DDB1	93	100.000	Colobus_angolensis_palliatus
ENSDORG00000000127	Ddb1	100	100.000	ENSCGRG00001016599	Ddb1	90	96.429	Cricetulus_griseus_chok1gshd
ENSDORG00000000127	Ddb1	100	100.000	ENSCGRG00000013427	Ddb1	84	100.000	Cricetulus_griseus_crigri
ENSDORG00000000127	Ddb1	92	94.091	ENSCSEG00000012499	ddb1	77	94.091	Cynoglossus_semilaevis
ENSDORG00000000127	Ddb1	93	95.455	ENSCVAG00000019531	ddb1	82	95.455	Cyprinodon_variegatus
ENSDORG00000000127	Ddb1	100	95.000	ENSDARG00000074431	ddb1	84	95.000	Danio_rerio
ENSDORG00000000127	Ddb1	93	100.000	ENSDNOG00000014884	DDB1	81	100.000	Dasypus_novemcinctus
ENSDORG00000000127	Ddb1	100	61.570	FBgn0260962	pic	84	61.247	Drosophila_melanogaster
ENSDORG00000000127	Ddb1	81	100.000	ENSETEG00000001053	-	68	100.000	Echinops_telfairi
ENSDORG00000000127	Ddb1	74	88.938	ENSEBUG00000014593	ddb1	78	90.000	Eptatretus_burgeri
ENSDORG00000000127	Ddb1	100	100.000	ENSEASG00005008184	DDB1	84	100.000	Equus_asinus_asinus
ENSDORG00000000127	Ddb1	100	100.000	ENSECAG00000012136	DDB1	84	100.000	Equus_caballus
ENSDORG00000000127	Ddb1	66	32.759	ENSEEUG00000015611	SF3B3	53	32.759	Erinaceus_europaeus
ENSDORG00000000127	Ddb1	82	97.475	ENSEEUG00000003194	DDB1	68	97.475	Erinaceus_europaeus
ENSDORG00000000127	Ddb1	100	95.455	ENSELUG00000023868	ddb1	84	95.455	Esox_lucius
ENSDORG00000000127	Ddb1	100	100.000	ENSFCAG00000029716	DDB1	84	100.000	Felis_catus
ENSDORG00000000127	Ddb1	100	96.201	ENSFALG00000011981	DDB1	84	96.201	Ficedula_albicollis
ENSDORG00000000127	Ddb1	100	100.000	ENSFDAG00000005128	DDB1	84	100.000	Fukomys_damarensis
ENSDORG00000000127	Ddb1	88	95.000	ENSFHEG00000022133	ddb1	80	95.000	Fundulus_heteroclitus
ENSDORG00000000127	Ddb1	75	93.694	ENSGMOG00000019386	ddb1	74	93.694	Gadus_morhua
ENSDORG00000000127	Ddb1	100	97.285	ENSGALG00000042333	DDB1	84	97.285	Gallus_gallus
ENSDORG00000000127	Ddb1	93	95.455	ENSGAFG00000013142	ddb1	82	95.455	Gambusia_affinis
ENSDORG00000000127	Ddb1	95	95.455	ENSGACG00000017182	ddb1	83	95.455	Gasterosteus_aculeatus
ENSDORG00000000127	Ddb1	94	98.788	ENSGAGG00000014124	DDB1	83	98.788	Gopherus_agassizii
ENSDORG00000000127	Ddb1	100	100.000	ENSGGOG00000004052	DDB1	93	100.000	Gorilla_gorilla
ENSDORG00000000127	Ddb1	100	95.000	ENSHBUG00000008873	ddb1	84	95.000	Haplochromis_burtoni
ENSDORG00000000127	Ddb1	100	100.000	ENSHGLG00000018430	DDB1	88	100.000	Heterocephalus_glaber_female
ENSDORG00000000127	Ddb1	100	100.000	ENSHGLG00100014475	DDB1	88	100.000	Heterocephalus_glaber_male
ENSDORG00000000127	Ddb1	93	94.091	ENSHCOG00000018670	ddb1	81	94.091	Hippocampus_comes
ENSDORG00000000127	Ddb1	100	93.636	ENSIPUG00000005612	DDB1	84	93.636	Ictalurus_punctatus
ENSDORG00000000127	Ddb1	100	100.000	ENSSTOG00000007552	DDB1	84	100.000	Ictidomys_tridecemlineatus
ENSDORG00000000127	Ddb1	100	100.000	ENSJJAG00000017769	Ddb1	84	100.000	Jaculus_jaculus
ENSDORG00000000127	Ddb1	93	95.455	ENSKMAG00000002315	ddb1	83	95.455	Kryptolebias_marmoratus
ENSDORG00000000127	Ddb1	82	94.146	ENSLBEG00000017065	ddb1	80	94.146	Labrus_bergylta
ENSDORG00000000127	Ddb1	100	95.475	ENSLACG00000017611	DDB1	84	95.475	Latimeria_chalumnae
ENSDORG00000000127	Ddb1	90	83.333	ENSLOCG00000000012	ddb1	84	83.333	Lepisosteus_oculatus
ENSDORG00000000127	Ddb1	100	100.000	ENSLAFG00000011513	DDB1	84	100.000	Loxodonta_africana
ENSDORG00000000127	Ddb1	100	100.000	ENSMFAG00000042035	DDB1	93	100.000	Macaca_fascicularis
ENSDORG00000000127	Ddb1	99	100.000	ENSMMUG00000002691	DDB1	100	98.936	Macaca_mulatta
ENSDORG00000000127	Ddb1	100	100.000	ENSMNEG00000031559	DDB1	93	100.000	Macaca_nemestrina
ENSDORG00000000127	Ddb1	100	100.000	ENSMLEG00000044136	DDB1	93	100.000	Mandrillus_leucophaeus
ENSDORG00000000127	Ddb1	100	95.455	ENSMAMG00000014372	ddb1	84	95.455	Mastacembelus_armatus
ENSDORG00000000127	Ddb1	100	95.000	ENSMZEG00005013835	ddb1	84	95.000	Maylandia_zebra
ENSDORG00000000127	Ddb1	93	96.053	ENSMGAG00000004990	DDB1	83	96.053	Meleagris_gallopavo
ENSDORG00000000127	Ddb1	100	100.000	ENSMAUG00000012926	Ddb1	84	100.000	Mesocricetus_auratus
ENSDORG00000000127	Ddb1	100	100.000	ENSMICG00000013703	DDB1	84	100.000	Microcebus_murinus
ENSDORG00000000127	Ddb1	100	99.728	ENSMOCG00000020499	Ddb1	84	99.728	Microtus_ochrogaster
ENSDORG00000000127	Ddb1	83	95.455	ENSMMOG00000001758	ddb1	81	95.455	Mola_mola
ENSDORG00000000127	Ddb1	100	96.118	ENSMODG00000020353	DDB1	84	96.118	Monodelphis_domestica
ENSDORG00000000127	Ddb1	100	95.455	ENSMALG00000014071	ddb1	84	95.455	Monopterus_albus
ENSDORG00000000127	Ddb1	100	100.000	MGP_CAROLIEiJ_G0022695	Ddb1	84	100.000	Mus_caroli
ENSDORG00000000127	Ddb1	100	100.000	ENSMUSG00000024740	Ddb1	84	100.000	Mus_musculus
ENSDORG00000000127	Ddb1	100	100.000	MGP_PahariEiJ_G0014189	Ddb1	84	100.000	Mus_pahari
ENSDORG00000000127	Ddb1	100	100.000	MGP_SPRETEiJ_G0023609	Ddb1	84	100.000	Mus_spretus
ENSDORG00000000127	Ddb1	100	100.000	ENSMPUG00000014200	DDB1	83	100.000	Mustela_putorius_furo
ENSDORG00000000127	Ddb1	100	99.548	ENSMLUG00000013232	DDB1	84	99.548	Myotis_lucifugus
ENSDORG00000000127	Ddb1	100	99.548	ENSNGAG00000009384	Ddb1	84	99.548	Nannospalax_galili
ENSDORG00000000127	Ddb1	100	95.000	ENSNBRG00000019581	ddb1	84	95.000	Neolamprologus_brichardi
ENSDORG00000000127	Ddb1	100	100.000	ENSNLEG00000002022	DDB1	84	100.000	Nomascus_leucogenys
ENSDORG00000000127	Ddb1	89	99.648	ENSMEUG00000001099	DDB1	76	99.648	Notamacropus_eugenii
ENSDORG00000000127	Ddb1	89	99.107	ENSOPRG00000008254	DDB1	74	99.107	Ochotona_princeps
ENSDORG00000000127	Ddb1	100	99.548	ENSODEG00000002419	DDB1	84	99.548	Octodon_degus
ENSDORG00000000127	Ddb1	100	95.000	ENSONIG00000005804	ddb1	84	95.000	Oreochromis_niloticus
ENSDORG00000000127	Ddb1	89	99.115	ENSOANG00000004897	DDB1	82	99.115	Ornithorhynchus_anatinus
ENSDORG00000000127	Ddb1	100	100.000	ENSOCUG00000001667	DDB1	84	100.000	Oryctolagus_cuniculus
ENSDORG00000000127	Ddb1	95	93.636	ENSORLG00000001399	ddb1	83	93.636	Oryzias_latipes
ENSDORG00000000127	Ddb1	95	93.636	ENSORLG00020001277	ddb1	83	93.636	Oryzias_latipes_hni
ENSDORG00000000127	Ddb1	93	93.636	ENSORLG00015002080	ddb1	85	93.636	Oryzias_latipes_hsok
ENSDORG00000000127	Ddb1	95	93.636	ENSOMEG00000006181	ddb1	82	93.636	Oryzias_melastigma
ENSDORG00000000127	Ddb1	100	100.000	ENSOGAG00000016103	DDB1	84	100.000	Otolemur_garnettii
ENSDORG00000000127	Ddb1	98	100.000	ENSOARG00000011716	DDB1	81	100.000	Ovis_aries
ENSDORG00000000127	Ddb1	100	100.000	ENSPPAG00000035343	DDB1	93	100.000	Pan_paniscus
ENSDORG00000000127	Ddb1	100	100.000	ENSPPRG00000013300	DDB1	84	100.000	Panthera_pardus
ENSDORG00000000127	Ddb1	98	100.000	ENSPTIG00000006909	DDB1	82	100.000	Panthera_tigris_altaica
ENSDORG00000000127	Ddb1	100	100.000	ENSPTRG00000003737	DDB1	93	100.000	Pan_troglodytes
ENSDORG00000000127	Ddb1	100	100.000	ENSPANG00000000242	DDB1	93	100.000	Papio_anubis
ENSDORG00000000127	Ddb1	93	95.000	ENSPKIG00000019213	ddb1	78	95.000	Paramormyrops_kingsleyae
ENSDORG00000000127	Ddb1	98	96.552	ENSPSIG00000013275	DDB1	84	96.552	Pelodiscus_sinensis
ENSDORG00000000127	Ddb1	83	94.545	ENSPMGG00000021179	ddb1	81	94.545	Periophthalmus_magnuspinnatus
ENSDORG00000000127	Ddb1	100	100.000	ENSPEMG00000012241	Ddb1	84	100.000	Peromyscus_maniculatus_bairdii
ENSDORG00000000127	Ddb1	87	88.350	ENSPMAG00000008479	ddb1	83	90.000	Petromyzon_marinus
ENSDORG00000000127	Ddb1	100	99.548	ENSPCIG00000002643	DDB1	87	99.548	Phascolarctos_cinereus
ENSDORG00000000127	Ddb1	100	95.455	ENSPFOG00000002768	ddb1	84	95.455	Poecilia_formosa
ENSDORG00000000127	Ddb1	100	95.455	ENSPLAG00000017227	ddb1	84	95.455	Poecilia_latipinna
ENSDORG00000000127	Ddb1	100	95.455	ENSPMEG00000011398	ddb1	84	95.455	Poecilia_mexicana
ENSDORG00000000127	Ddb1	93	95.455	ENSPREG00000004440	ddb1	81	95.455	Poecilia_reticulata
ENSDORG00000000127	Ddb1	100	100.000	ENSPPYG00000003193	DDB1	84	100.000	Pongo_abelii
ENSDORG00000000127	Ddb1	82	100.000	ENSPCAG00000011040	DDB1	68	100.000	Procavia_capensis
ENSDORG00000000127	Ddb1	100	100.000	ENSPCOG00000015176	DDB1	84	100.000	Propithecus_coquereli
ENSDORG00000000127	Ddb1	100	99.591	ENSPVAG00000003847	DDB1	84	99.591	Pteropus_vampyrus
ENSDORG00000000127	Ddb1	58	90.036	ENSPNYG00000010482	ddb1	100	90.036	Pundamilia_nyererei
ENSDORG00000000127	Ddb1	93	95.000	ENSPNAG00000006635	ddb1	80	95.000	Pygocentrus_nattereri
ENSDORG00000000127	Ddb1	100	100.000	ENSRNOG00000020715	Ddb1	84	100.000	Rattus_norvegicus
ENSDORG00000000127	Ddb1	100	100.000	ENSRBIG00000033611	DDB1	84	100.000	Rhinopithecus_bieti
ENSDORG00000000127	Ddb1	100	100.000	ENSRROG00000041407	DDB1	93	100.000	Rhinopithecus_roxellana
ENSDORG00000000127	Ddb1	100	100.000	ENSSBOG00000019775	DDB1	84	100.000	Saimiri_boliviensis_boliviensis
ENSDORG00000000127	Ddb1	93	99.338	ENSSHAG00000011600	DDB1	83	99.338	Sarcophilus_harrisii
ENSDORG00000000127	Ddb1	93	94.545	ENSSFOG00015011151	ddb1	80	94.545	Scleropages_formosus
ENSDORG00000000127	Ddb1	100	95.455	ENSSMAG00000009495	ddb1	84	95.455	Scophthalmus_maximus
ENSDORG00000000127	Ddb1	100	95.455	ENSSDUG00000004642	ddb1	84	95.455	Seriola_dumerili
ENSDORG00000000127	Ddb1	100	95.455	ENSSLDG00000015804	ddb1	84	95.455	Seriola_lalandi_dorsalis
ENSDORG00000000127	Ddb1	75	100.000	ENSSARG00000003290	-	64	100.000	Sorex_araneus
ENSDORG00000000127	Ddb1	100	99.548	ENSSPUG00000019338	DDB1	84	99.548	Sphenodon_punctatus
ENSDORG00000000127	Ddb1	93	95.455	ENSSPAG00000009888	ddb1	82	95.455	Stegastes_partitus
ENSDORG00000000127	Ddb1	100	100.000	ENSSSCG00000013094	DDB1	84	100.000	Sus_scrofa
ENSDORG00000000127	Ddb1	100	98.190	ENSTGUG00000006414	DDB1	84	98.190	Taeniopygia_guttata
ENSDORG00000000127	Ddb1	93	94.091	ENSTRUG00000016682	ddb1	81	94.091	Takifugu_rubripes
ENSDORG00000000127	Ddb1	85	86.250	ENSTNIG00000009565	ddb1	81	86.250	Tetraodon_nigroviridis
ENSDORG00000000127	Ddb1	94	100.000	ENSTTRG00000011055	DDB1	81	100.000	Tursiops_truncatus
ENSDORG00000000127	Ddb1	93	100.000	ENSUAMG00000017793	DDB1	77	100.000	Ursus_americanus
ENSDORG00000000127	Ddb1	93	100.000	ENSUMAG00000011788	DDB1	81	100.000	Ursus_maritimus
ENSDORG00000000127	Ddb1	87	100.000	ENSVPAG00000007963	DDB1	81	93.396	Vicugna_pacos
ENSDORG00000000127	Ddb1	100	100.000	ENSVVUG00000004987	DDB1	89	95.763	Vulpes_vulpes
ENSDORG00000000127	Ddb1	100	95.475	ENSXETG00000008820	ddb1	84	95.475	Xenopus_tropicalis
ENSDORG00000000127	Ddb1	83	95.455	ENSXCOG00000013956	ddb1	81	95.455	Xiphophorus_couchianus
ENSDORG00000000127	Ddb1	93	95.455	ENSXMAG00000000022	ddb1	82	95.455	Xiphophorus_maculatus