EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000000387 (Gene tree)
Gene ID: 105996056
Gene Symbol: Zfp408
Alias: LOC381410
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 5770 bases
Position: chrKN672471.1:1428865-1434634
Accession: 105996056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000000364	zf-C2H2	PF00096.26	1.9e-37	1	6
ENSDORP00000000364	zf-C2H2	PF00096.26	1.9e-37	2	6
ENSDORP00000000364	zf-C2H2	PF00096.26	1.9e-37	3	6
ENSDORP00000000364	zf-C2H2	PF00096.26	1.9e-37	4	6
ENSDORP00000000364	zf-C2H2	PF00096.26	1.9e-37	5	6
ENSDORP00000000364	zf-C2H2	PF00096.26	1.9e-37	6	6
ENSDORP00000000364	zf-met	PF12874.7	8e-07	1	2
ENSDORP00000000364	zf-met	PF12874.7	8e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000000387	-	2004	XM_013030005	ENSDORP00000000364	667 (aa)	XP_012885459	UPI000BAD02B8

Gene Model

Click here to download ENSDORG00000000387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000000387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000000387	Zfp408	69	40.092	ENSDORG00000006054	Mynn	60	40.092
ENSDORG00000000387	Zfp408	59	38.929	ENSDORG00000026133	-	90	39.209
ENSDORG00000000387	Zfp408	57	36.025	ENSDORG00000002988	Zfp646	62	35.450
ENSDORG00000000387	Zfp408	50	38.790	ENSDORG00000023595	Zfp35	84	38.790
ENSDORG00000000387	Zfp408	50	32.927	ENSDORG00000023772	Zfp423	98	33.735
ENSDORG00000000387	Zfp408	51	38.033	ENSDORG00000027564	Zfp26	80	38.333
ENSDORG00000000387	Zfp408	59	36.275	ENSDORG00000025398	Zbtb6	57	36.275
ENSDORG00000000387	Zfp408	69	35.526	ENSDORG00000009396	Zfp354a	99	35.738

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000000387	Zfp408	97	72.046	ENSG00000175213	ZNF408	99	71.248	Homo_sapiens
ENSDORG00000000387	Zfp408	99	69.705	ENSAMEG00000006904	ZNF408	99	69.705	Ailuropoda_melanoleuca
ENSDORG00000000387	Zfp408	98	66.476	ENSANAG00000036294	ZNF408	99	65.966	Aotus_nancymaae
ENSDORG00000000387	Zfp408	73	52.699	ENSAMXG00000032642	znf408	66	52.320	Astyanax_mexicanus
ENSDORG00000000387	Zfp408	98	71.449	ENSCJAG00000019859	ZNF408	99	70.827	Callithrix_jacchus
ENSDORG00000000387	Zfp408	99	68.465	ENSCAFG00000009143	ZNF408	96	68.603	Canis_familiaris
ENSDORG00000000387	Zfp408	99	68.603	ENSCAFG00020019155	ZNF408	96	68.741	Canis_lupus_dingo
ENSDORG00000000387	Zfp408	88	68.601	ENSCHIG00000025346	ZNF408	95	69.231	Capra_hircus
ENSDORG00000000387	Zfp408	99	71.284	ENSTSYG00000025443	ZNF408	99	72.006	Carlito_syrichta
ENSDORG00000000387	Zfp408	98	71.019	ENSCCAG00000029472	ZNF408	99	70.266	Cebus_capucinus
ENSDORG00000000387	Zfp408	60	90.722	ENSCHOG00000009909	ZNF408	73	91.901	Choloepus_hoffmanni
ENSDORG00000000387	Zfp408	99	67.746	ENSCGRG00001023588	Zfp408	99	68.169	Cricetulus_griseus_chok1gshd
ENSDORG00000000387	Zfp408	99	67.746	ENSCGRG00000017618	Zfp408	99	68.169	Cricetulus_griseus_crigri
ENSDORG00000000387	Zfp408	99	65.035	ENSDNOG00000047669	ZNF408	97	66.429	Dasypus_novemcinctus
ENSDORG00000000387	Zfp408	89	57.016	ENSETEG00000017621	-	100	58.602	Echinops_telfairi
ENSDORG00000000387	Zfp408	99	67.549	ENSEASG00005015461	ZNF408	99	67.688	Equus_asinus_asinus
ENSDORG00000000387	Zfp408	99	67.549	ENSECAG00000010878	ZNF408	99	67.688	Equus_caballus
ENSDORG00000000387	Zfp408	94	65.544	ENSEEUG00000010466	ZNF408	93	65.850	Erinaceus_europaeus
ENSDORG00000000387	Zfp408	99	71.770	ENSFCAG00000029105	ZNF408	99	71.770	Felis_catus
ENSDORG00000000387	Zfp408	83	38.599	ENSFHEG00000016754	-	79	38.925	Fundulus_heteroclitus
ENSDORG00000000387	Zfp408	90	37.482	ENSGAFG00000018557	-	82	40.068	Gambusia_affinis
ENSDORG00000000387	Zfp408	97	71.758	ENSGGOG00000010152	ZNF408	99	70.968	Gorilla_gorilla
ENSDORG00000000387	Zfp408	84	68.464	ENSLAFG00000027848	ZNF408	98	68.740	Loxodonta_africana
ENSDORG00000000387	Zfp408	98	71.306	ENSMICG00000045320	ZNF408	99	70.927	Microcebus_murinus
ENSDORG00000000387	Zfp408	72	52.846	ENSMODG00000019895	-	83	52.926	Monodelphis_domestica
ENSDORG00000000387	Zfp408	98	70.413	ENSMPUG00000005490	ZNF408	99	69.553	Mustela_putorius_furo
ENSDORG00000000387	Zfp408	99	68.697	ENSNGAG00000000309	Zfp408	99	68.697	Nannospalax_galili
ENSDORG00000000387	Zfp408	99	70.868	ENSNLEG00000014132	ZNF408	99	71.289	Nomascus_leucogenys
ENSDORG00000000387	Zfp408	99	57.709	ENSOPRG00000009225	ZNF408	99	57.670	Ochotona_princeps
ENSDORG00000000387	Zfp408	99	67.373	ENSOCUG00000010953	ZNF408	99	67.373	Oryctolagus_cuniculus
ENSDORG00000000387	Zfp408	85	72.578	ENSOGAG00000034080	ZNF408	99	72.578	Otolemur_garnettii
ENSDORG00000000387	Zfp408	97	72.190	ENSPPAG00000034993	ZNF408	99	71.388	Pan_paniscus
ENSDORG00000000387	Zfp408	99	71.629	ENSPPRG00000016866	ZNF408	99	71.629	Panthera_pardus
ENSDORG00000000387	Zfp408	99	71.031	ENSPTIG00000015467	ZNF408	99	71.170	Panthera_tigris_altaica
ENSDORG00000000387	Zfp408	97	72.190	ENSPTRG00000003551	ZNF408	99	71.388	Pan_troglodytes
ENSDORG00000000387	Zfp408	76	68.058	ENSPEMG00000016757	Zfp408	99	68.421	Peromyscus_maniculatus_bairdii
ENSDORG00000000387	Zfp408	90	37.054	ENSPFOG00000001760	-	83	50.000	Poecilia_formosa
ENSDORG00000000387	Zfp408	82	44.248	ENSPLAG00000019895	-	99	44.248	Poecilia_latipinna
ENSDORG00000000387	Zfp408	51	51.020	ENSPMEG00000021147	-	64	50.442	Poecilia_mexicana
ENSDORG00000000387	Zfp408	90	35.901	ENSPREG00000017068	-	82	38.889	Poecilia_reticulata
ENSDORG00000000387	Zfp408	97	72.886	ENSPPYG00000003318	ZNF408	99	74.232	Pongo_abelii
ENSDORG00000000387	Zfp408	99	66.385	ENSPCAG00000014001	ZNF408	99	66.385	Procavia_capensis
ENSDORG00000000387	Zfp408	97	73.132	ENSPCOG00000028698	ZNF408	99	72.511	Propithecus_coquereli
ENSDORG00000000387	Zfp408	97	71.698	ENSPVAG00000015791	ZNF408	99	70.822	Pteropus_vampyrus
ENSDORG00000000387	Zfp408	98	70.690	ENSSBOG00000033023	ZNF408	99	70.225	Saimiri_boliviensis_boliviensis
ENSDORG00000000387	Zfp408	99	68.524	ENSSSCG00000023097	ZNF408	96	68.050	Sus_scrofa
ENSDORG00000000387	Zfp408	81	86.328	ENSTBEG00000004260	ZNF408	83	86.328	Tupaia_belangeri
ENSDORG00000000387	Zfp408	99	69.846	ENSUAMG00000026154	ZNF408	99	69.846	Ursus_americanus
ENSDORG00000000387	Zfp408	99	69.944	ENSUMAG00000014405	ZNF408	99	69.944	Ursus_maritimus
ENSDORG00000000387	Zfp408	99	68.560	ENSVVUG00000026805	ZNF408	96	68.560	Vulpes_vulpes
ENSDORG00000000387	Zfp408	54	55.586	ENSXETG00000001980	znf408	94	55.313	Xenopus_tropicalis
ENSDORG00000000387	Zfp408	51	51.895	ENSXCOG00000002869	-	67	50.432	Xiphophorus_couchianus
ENSDORG00000000387	Zfp408	52	50.568	ENSXMAG00000018347	-	65	53.750	Xiphophorus_maculatus