EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000000394 (Gene tree)
Gene ID: 105993740
Gene Symbol: -
Alias: -
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 17470 bases
Position: chrKN672445.1:6285524-6302993
Accession: 105993740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000000371	HAT	PF02184.16	8.6e-32	1	2
ENSDORP00000000371	HAT	PF02184.16	8.6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000000394	-	2082	XM_013027078	ENSDORP00000000371	693 (aa)	XP_012882532	UPI000BAD1A88

Gene Model

Click here to download ENSDORG00000000394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000000394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000000394	-	97	87.130	ENSDORG00000030174	-	99	87.130
ENSDORG00000000394	-	97	87.574	ENSDORG00000023724	-	99	87.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000000394	-	100	94.661	ENSG00000101343	CRNKL1	100	94.661	Homo_sapiens
ENSDORG00000000394	-	99	84.226	ENSAPOG00000009705	crnkl1	97	84.435	Acanthochromis_polyacanthus
ENSDORG00000000394	-	100	96.681	ENSAMEG00000000270	CRNKL1	83	96.681	Ailuropoda_melanoleuca
ENSDORG00000000394	-	98	84.265	ENSACIG00000015267	crnkl1	89	84.265	Amphilophus_citrinellus
ENSDORG00000000394	-	99	84.370	ENSAOCG00000021964	crnkl1	91	84.370	Amphiprion_ocellaris
ENSDORG00000000394	-	99	84.226	ENSAPEG00000015041	crnkl1	91	84.226	Amphiprion_percula
ENSDORG00000000394	-	99	84.380	ENSATEG00000001068	crnkl1	89	84.380	Anabas_testudineus
ENSDORG00000000394	-	99	88.584	ENSAPLG00000013105	CRNKL1	99	88.584	Anas_platyrhynchos
ENSDORG00000000394	-	99	91.292	ENSACAG00000005284	CRNKL1	99	91.292	Anolis_carolinensis
ENSDORG00000000394	-	92	94.984	ENSANAG00000024889	CRNKL1	100	94.984	Aotus_nancymaae
ENSDORG00000000394	-	99	85.652	ENSACLG00000010813	crnkl1	90	85.652	Astatotilapia_calliptera
ENSDORG00000000394	-	97	85.373	ENSAMXG00000018334	crnkl1	92	83.502	Astyanax_mexicanus
ENSDORG00000000394	-	100	95.382	ENSBTAG00000008472	CRNKL1	99	95.382	Bos_taurus
ENSDORG00000000394	-	93	61.325	WBGene00019762	M03F8.3	91	60.787	Caenorhabditis_elegans
ENSDORG00000000394	-	100	94.517	ENSCJAG00000005393	CRNKL1	100	94.517	Callithrix_jacchus
ENSDORG00000000394	-	100	96.392	ENSCAFG00000005333	CRNKL1	94	96.392	Canis_familiaris
ENSDORG00000000394	-	100	96.392	ENSCAFG00020027488	CRNKL1	100	96.392	Canis_lupus_dingo
ENSDORG00000000394	-	100	94.253	ENSCHIG00000013171	CRNKL1	99	94.253	Capra_hircus
ENSDORG00000000394	-	100	95.238	ENSTSYG00000004197	CRNKL1	100	95.238	Carlito_syrichta
ENSDORG00000000394	-	96	95.200	ENSCAPG00000010501	CRNKL1	99	95.200	Cavia_aperea
ENSDORG00000000394	-	100	95.527	ENSCPOG00000004418	CRNKL1	100	95.527	Cavia_porcellus
ENSDORG00000000394	-	100	94.517	ENSCCAG00000027037	CRNKL1	100	94.517	Cebus_capucinus
ENSDORG00000000394	-	100	94.949	ENSCATG00000034247	CRNKL1	100	94.949	Cercocebus_atys
ENSDORG00000000394	-	100	96.248	ENSCLAG00000013859	CRNKL1	100	96.248	Chinchilla_lanigera
ENSDORG00000000394	-	100	94.949	ENSCSAG00000011434	CRNKL1	100	94.949	Chlorocebus_sabaeus
ENSDORG00000000394	-	100	95.815	ENSCHOG00000006371	CRNKL1	84	95.815	Choloepus_hoffmanni
ENSDORG00000000394	-	99	91.896	ENSCPBG00000023501	CRNKL1	99	91.896	Chrysemys_picta_bellii
ENSDORG00000000394	-	96	68.413	ENSCING00000002709	-	99	66.812	Ciona_intestinalis
ENSDORG00000000394	-	100	95.094	ENSCANG00000038789	CRNKL1	100	95.094	Colobus_angolensis_palliatus
ENSDORG00000000394	-	100	96.537	ENSCGRG00001000687	-	99	96.537	Cricetulus_griseus_chok1gshd
ENSDORG00000000394	-	100	96.537	ENSCGRG00001001115	-	99	96.537	Cricetulus_griseus_chok1gshd
ENSDORG00000000394	-	100	96.537	ENSCGRG00000007854	Crnkl1	99	96.537	Cricetulus_griseus_crigri
ENSDORG00000000394	-	98	83.700	ENSCSEG00000005594	crnkl1	86	83.700	Cynoglossus_semilaevis
ENSDORG00000000394	-	97	85.268	ENSCVAG00000015172	crnkl1	92	83.357	Cyprinodon_variegatus
ENSDORG00000000394	-	96	85.180	ENSDARG00000007901	crnkl1	90	83.913	Danio_rerio
ENSDORG00000000394	-	99	96.667	ENSDNOG00000016226	CRNKL1	95	96.667	Dasypus_novemcinctus
ENSDORG00000000394	-	97	67.155	FBgn0000377	crn	95	67.708	Drosophila_melanogaster
ENSDORG00000000394	-	100	84.127	ENSETEG00000003711	CRNKL1	84	84.127	Echinops_telfairi
ENSDORG00000000394	-	99	59.600	ENSEBUG00000013461	crnkl1	96	56.023	Eptatretus_burgeri
ENSDORG00000000394	-	100	96.392	ENSEASG00005002072	CRNKL1	100	96.392	Equus_asinus_asinus
ENSDORG00000000394	-	100	96.392	ENSECAG00000022215	CRNKL1	100	96.392	Equus_caballus
ENSDORG00000000394	-	99	93.294	ENSEEUG00000000413	CRNKL1	92	93.362	Erinaceus_europaeus
ENSDORG00000000394	-	98	84.763	ENSELUG00000015424	crnkl1	97	83.694	Esox_lucius
ENSDORG00000000394	-	100	96.681	ENSFCAG00000000714	CRNKL1	100	96.681	Felis_catus
ENSDORG00000000394	-	98	90.399	ENSFALG00000004611	CRNKL1	100	90.399	Ficedula_albicollis
ENSDORG00000000394	-	100	96.248	ENSFDAG00000000604	CRNKL1	100	96.248	Fukomys_damarensis
ENSDORG00000000394	-	98	84.389	ENSFHEG00000013163	crnkl1	88	84.389	Fundulus_heteroclitus
ENSDORG00000000394	-	97	83.952	ENSGMOG00000007609	crnkl1	94	82.344	Gadus_morhua
ENSDORG00000000394	-	99	91.606	ENSGALG00000008429	CRNKL1	99	91.606	Gallus_gallus
ENSDORG00000000394	-	97	85.119	ENSGAFG00000014249	crnkl1	90	83.502	Gambusia_affinis
ENSDORG00000000394	-	99	83.019	ENSGACG00000011852	crnkl1	91	83.019	Gasterosteus_aculeatus
ENSDORG00000000394	-	96	90.634	ENSGAGG00000021233	CRNKL1	100	90.634	Gopherus_agassizii
ENSDORG00000000394	-	100	94.661	ENSGGOG00000014176	CRNKL1	100	94.661	Gorilla_gorilla
ENSDORG00000000394	-	99	85.505	ENSHBUG00000005246	crnkl1	90	85.505	Haplochromis_burtoni
ENSDORG00000000394	-	100	96.104	ENSHGLG00000010856	CRNKL1	100	96.104	Heterocephalus_glaber_female
ENSDORG00000000394	-	100	96.104	ENSHGLG00100011521	CRNKL1	100	96.104	Heterocephalus_glaber_male
ENSDORG00000000394	-	97	82.764	ENSHCOG00000006420	crnkl1	98	81.395	Hippocampus_comes
ENSDORG00000000394	-	94	85.627	ENSIPUG00000006751	crnkl1	93	83.852	Ictalurus_punctatus
ENSDORG00000000394	-	97	74.218	ENSIPUG00000006836	-	99	73.460	Ictalurus_punctatus
ENSDORG00000000394	-	93	67.185	ENSIPUG00000000315	-	100	68.380	Ictalurus_punctatus
ENSDORG00000000394	-	100	97.547	ENSSTOG00000014747	CRNKL1	100	97.547	Ictidomys_tridecemlineatus
ENSDORG00000000394	-	100	96.028	ENSJJAG00000016926	Crnkl1	100	96.028	Jaculus_jaculus
ENSDORG00000000394	-	99	84.302	ENSKMAG00000003620	crnkl1	86	84.302	Kryptolebias_marmoratus
ENSDORG00000000394	-	97	69.219	ENSLBEG00000003543	crnkl1	92	69.710	Labrus_bergylta
ENSDORG00000000394	-	99	86.067	ENSLACG00000001129	CRNKL1	99	86.067	Latimeria_chalumnae
ENSDORG00000000394	-	97	87.015	ENSLOCG00000016889	crnkl1	95	85.507	Lepisosteus_oculatus
ENSDORG00000000394	-	100	95.677	ENSLAFG00000004512	CRNKL1	100	95.677	Loxodonta_africana
ENSDORG00000000394	-	100	94.949	ENSMFAG00000039893	CRNKL1	100	94.949	Macaca_fascicularis
ENSDORG00000000394	-	100	94.949	ENSMMUG00000007709	CRNKL1	100	94.949	Macaca_mulatta
ENSDORG00000000394	-	100	94.949	ENSMNEG00000037490	CRNKL1	100	94.949	Macaca_nemestrina
ENSDORG00000000394	-	99	96.064	ENSMLEG00000034885	CRNKL1	100	94.949	Mandrillus_leucophaeus
ENSDORG00000000394	-	99	84.081	ENSMAMG00000008757	crnkl1	90	84.081	Mastacembelus_armatus
ENSDORG00000000394	-	99	85.652	ENSMZEG00005022345	crnkl1	90	85.652	Maylandia_zebra
ENSDORG00000000394	-	99	91.462	ENSMGAG00000003452	CRNKL1	94	91.462	Meleagris_gallopavo
ENSDORG00000000394	-	100	96.392	ENSMAUG00000020764	Crnkl1	99	96.392	Mesocricetus_auratus
ENSDORG00000000394	-	100	95.671	ENSMICG00000006048	CRNKL1	100	95.671	Microcebus_murinus
ENSDORG00000000394	-	100	90.272	ENSMOCG00000000681	-	99	90.272	Microtus_ochrogaster
ENSDORG00000000394	-	97	68.304	ENSMOCG00000004179	-	96	68.529	Microtus_ochrogaster
ENSDORG00000000394	-	92	83.333	ENSMMOG00000017601	crnkl1	97	83.333	Mola_mola
ENSDORG00000000394	-	100	92.672	ENSMODG00000005961	-	99	92.672	Monodelphis_domestica
ENSDORG00000000394	-	100	84.271	ENSMODG00000010857	-	99	84.271	Monodelphis_domestica
ENSDORG00000000394	-	98	61.079	ENSMALG00000011211	crnkl1	89	64.380	Monopterus_albus
ENSDORG00000000394	-	100	96.681	MGP_CAROLIEiJ_G0024394	Crnkl1	99	96.681	Mus_caroli
ENSDORG00000000394	-	100	96.825	ENSMUSG00000001767	Crnkl1	99	96.825	Mus_musculus
ENSDORG00000000394	-	100	95.094	MGP_PahariEiJ_G0025838	Crnkl1	99	95.094	Mus_pahari
ENSDORG00000000394	-	100	96.681	MGP_SPRETEiJ_G0025312	Crnkl1	99	96.681	Mus_spretus
ENSDORG00000000394	-	100	96.537	ENSMPUG00000001226	CRNKL1	100	96.537	Mustela_putorius_furo
ENSDORG00000000394	-	100	96.392	ENSMLUG00000016513	CRNKL1	89	96.392	Myotis_lucifugus
ENSDORG00000000394	-	100	96.148	ENSNGAG00000023097	Crnkl1	100	96.148	Nannospalax_galili
ENSDORG00000000394	-	99	85.798	ENSNBRG00000007867	crnkl1	89	85.798	Neolamprologus_brichardi
ENSDORG00000000394	-	100	91.198	ENSNLEG00000009862	CRNKL1	100	91.198	Nomascus_leucogenys
ENSDORG00000000394	-	100	84.150	ENSMEUG00000002361	-	99	84.150	Notamacropus_eugenii
ENSDORG00000000394	-	98	93.195	ENSMEUG00000012167	-	100	93.195	Notamacropus_eugenii
ENSDORG00000000394	-	75	65.649	ENSOPRG00000009242	-	61	65.649	Ochotona_princeps
ENSDORG00000000394	-	100	96.392	ENSODEG00000012175	CRNKL1	100	96.392	Octodon_degus
ENSDORG00000000394	-	99	86.091	ENSONIG00000018728	crnkl1	89	86.091	Oreochromis_niloticus
ENSDORG00000000394	-	99	96.387	ENSOCUG00000015484	CRNKL1	83	96.387	Oryctolagus_cuniculus
ENSDORG00000000394	-	99	81.621	ENSORLG00000017240	crnkl1	96	78.788	Oryzias_latipes
ENSDORG00000000394	-	97	83.631	ENSORLG00020001742	crnkl1	89	83.631	Oryzias_latipes_hni
ENSDORG00000000394	-	99	81.766	ENSORLG00015019564	crnkl1	89	83.631	Oryzias_latipes_hsok
ENSDORG00000000394	-	99	82.779	ENSOMEG00000019895	crnkl1	91	82.779	Oryzias_melastigma
ENSDORG00000000394	-	100	94.949	ENSOGAG00000011544	CRNKL1	100	94.949	Otolemur_garnettii
ENSDORG00000000394	-	99	95.335	ENSOARG00000002150	CRNKL1	89	95.382	Ovis_aries
ENSDORG00000000394	-	99	93.304	ENSPPAG00000027847	CRNKL1	83	93.372	Pan_paniscus
ENSDORG00000000394	-	100	96.681	ENSPPRG00000001955	CRNKL1	100	96.681	Panthera_pardus
ENSDORG00000000394	-	100	96.681	ENSPTIG00000007393	CRNKL1	100	96.681	Panthera_tigris_altaica
ENSDORG00000000394	-	100	94.517	ENSPTRG00000030609	CRNKL1	100	94.517	Pan_troglodytes
ENSDORG00000000394	-	100	94.949	ENSPANG00000017420	CRNKL1	100	94.949	Papio_anubis
ENSDORG00000000394	-	96	81.045	ENSPKIG00000017093	crnkl1	89	80.349	Paramormyrops_kingsleyae
ENSDORG00000000394	-	99	91.001	ENSPSIG00000012705	CRNKL1	99	91.001	Pelodiscus_sinensis
ENSDORG00000000394	-	99	78.488	ENSPMGG00000006263	crnkl1	96	78.102	Periophthalmus_magnuspinnatus
ENSDORG00000000394	-	100	96.537	ENSPEMG00000000073	-	99	96.537	Peromyscus_maniculatus_bairdii
ENSDORG00000000394	-	99	80.808	ENSPMAG00000002250	crnkl1	99	80.808	Petromyzon_marinus
ENSDORG00000000394	-	100	94.084	ENSPCIG00000025825	CRNKL1	96	94.084	Phascolarctos_cinereus
ENSDORG00000000394	-	97	84.970	ENSPFOG00000005102	crnkl1	93	83.141	Poecilia_formosa
ENSDORG00000000394	-	97	84.970	ENSPLAG00000007288	crnkl1	90	83.022	Poecilia_latipinna
ENSDORG00000000394	-	97	85.119	ENSPMEG00000008865	crnkl1	93	83.285	Poecilia_mexicana
ENSDORG00000000394	-	97	84.673	ENSPREG00000012615	crnkl1	92	82.899	Poecilia_reticulata
ENSDORG00000000394	-	99	94.898	ENSPPYG00000010747	CRNKL1	81	94.949	Pongo_abelii
ENSDORG00000000394	-	99	90.087	ENSPCAG00000003296	CRNKL1	85	90.188	Procavia_capensis
ENSDORG00000000394	-	100	96.104	ENSPCOG00000017608	CRNKL1	83	96.104	Propithecus_coquereli
ENSDORG00000000394	-	100	96.248	ENSPVAG00000006207	CRNKL1	83	96.248	Pteropus_vampyrus
ENSDORG00000000394	-	99	85.505	ENSPNYG00000001977	crnkl1	90	85.505	Pundamilia_nyererei
ENSDORG00000000394	-	98	86.243	ENSPNAG00000001507	crnkl1	98	83.357	Pygocentrus_nattereri
ENSDORG00000000394	-	100	96.392	ENSRNOG00000040045	Crnkl1	99	96.392	Rattus_norvegicus
ENSDORG00000000394	-	100	96.825	ENSRNOG00000010587	Crnkl1	99	96.825	Rattus_norvegicus
ENSDORG00000000394	-	100	94.805	ENSRBIG00000031770	CRNKL1	100	94.805	Rhinopithecus_bieti
ENSDORG00000000394	-	100	94.661	ENSRROG00000040450	CRNKL1	100	94.661	Rhinopithecus_roxellana
ENSDORG00000000394	-	94	36.585	YLR117C	CLF1	99	36.676	Saccharomyces_cerevisiae
ENSDORG00000000394	-	100	94.517	ENSSBOG00000029672	CRNKL1	100	94.517	Saimiri_boliviensis_boliviensis
ENSDORG00000000394	-	96	72.782	ENSSHAG00000011199	CRNKL1	99	72.782	Sarcophilus_harrisii
ENSDORG00000000394	-	96	85.928	ENSSFOG00015000946	crnkl1	89	84.348	Scleropages_formosus
ENSDORG00000000394	-	99	82.729	ENSSMAG00000007933	crnkl1	87	83.900	Scophthalmus_maximus
ENSDORG00000000394	-	99	78.363	ENSSDUG00000012625	crnkl1	87	78.363	Seriola_dumerili
ENSDORG00000000394	-	99	84.795	ENSSLDG00000021413	crnkl1	88	84.795	Seriola_lalandi_dorsalis
ENSDORG00000000394	-	100	95.527	ENSSARG00000006443	CRNKL1	82	95.527	Sorex_araneus
ENSDORG00000000394	-	99	90.711	ENSSPUG00000005254	CRNKL1	99	90.711	Sphenodon_punctatus
ENSDORG00000000394	-	97	85.714	ENSSPAG00000016150	crnkl1	86	85.714	Stegastes_partitus
ENSDORG00000000394	-	100	96.392	ENSSSCG00000038587	CRNKL1	99	96.392	Sus_scrofa
ENSDORG00000000394	-	99	90.883	ENSTGUG00000007645	CRNKL1	98	90.883	Taeniopygia_guttata
ENSDORG00000000394	-	98	79.438	ENSTRUG00000015417	crnkl1	90	78.832	Takifugu_rubripes
ENSDORG00000000394	-	97	83.631	ENSTNIG00000010710	crnkl1	99	82.344	Tetraodon_nigroviridis
ENSDORG00000000394	-	91	94.770	ENSTBEG00000001304	CRNKL1	82	94.828	Tupaia_belangeri
ENSDORG00000000394	-	92	92.947	ENSTTRG00000000484	CRNKL1	81	92.947	Tursiops_truncatus
ENSDORG00000000394	-	100	96.681	ENSUAMG00000018586	CRNKL1	100	96.681	Ursus_americanus
ENSDORG00000000394	-	100	96.681	ENSUMAG00000024957	CRNKL1	100	96.681	Ursus_maritimus
ENSDORG00000000394	-	100	96.392	ENSVVUG00000012559	CRNKL1	82	96.392	Vulpes_vulpes
ENSDORG00000000394	-	99	88.728	ENSXETG00000009698	crnkl1	99	88.728	Xenopus_tropicalis
ENSDORG00000000394	-	97	84.226	ENSXCOG00000000824	crnkl1	91	82.558	Xiphophorus_couchianus
ENSDORG00000000394	-	97	85.119	ENSXMAG00000006896	crnkl1	91	83.430	Xiphophorus_maculatus