EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000000858 (Gene tree)
Gene ID: 105984445
Gene Symbol: Prpf18
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 27288 bases
Position: chrKN672370.1:16766871-16794158
Accession: 105984445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000000806	PRP4	PF08799.11	8.3e-14	1	1
ENSDORP00000000806	Prp18	PF02840.15	5.5e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000000858	-	1580	XM_013014622	ENSDORP00000000806	342 (aa)	XP_012870076	A0A1S3F0D4

Gene Model

Click here to download ENSDORG00000000858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000000858's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000000858	Prpf18	100	99.123	ENSG00000165630	PRPF18	100	99.123	Homo_sapiens
ENSDORG00000000858	Prpf18	100	84.795	ENSAPOG00000024177	prpf18	100	84.795	Acanthochromis_polyacanthus
ENSDORG00000000858	Prpf18	100	99.123	ENSAMEG00000013591	-	100	99.123	Ailuropoda_melanoleuca
ENSDORG00000000858	Prpf18	100	83.626	ENSACIG00000001186	prpf18	100	83.626	Amphilophus_citrinellus
ENSDORG00000000858	Prpf18	98	84.776	ENSAOCG00000006572	prpf18	94	82.164	Amphiprion_ocellaris
ENSDORG00000000858	Prpf18	100	85.088	ENSAPEG00000004564	prpf18	100	85.088	Amphiprion_percula
ENSDORG00000000858	Prpf18	100	83.626	ENSATEG00000000303	prpf18	100	83.626	Anabas_testudineus
ENSDORG00000000858	Prpf18	99	90.882	ENSAPLG00000003387	-	99	90.882	Anas_platyrhynchos
ENSDORG00000000858	Prpf18	100	91.279	ENSACAG00000000818	-	100	91.279	Anolis_carolinensis
ENSDORG00000000858	Prpf18	100	98.538	ENSANAG00000037445	-	100	98.538	Aotus_nancymaae
ENSDORG00000000858	Prpf18	100	84.211	ENSACLG00000026296	prpf18	100	84.211	Astatotilapia_calliptera
ENSDORG00000000858	Prpf18	100	83.429	ENSAMXG00000012848	prpf18	100	83.429	Astyanax_mexicanus
ENSDORG00000000858	Prpf18	100	98.830	ENSBTAG00000017244	PRPF18	100	98.830	Bos_taurus
ENSDORG00000000858	Prpf18	98	37.931	WBGene00009320	F32B6.3	97	37.931	Caenorhabditis_elegans
ENSDORG00000000858	Prpf18	100	98.538	ENSCJAG00000009432	-	100	98.538	Callithrix_jacchus
ENSDORG00000000858	Prpf18	100	99.123	ENSCAFG00000004735	-	100	99.123	Canis_familiaris
ENSDORG00000000858	Prpf18	100	99.123	ENSCAFG00020007712	-	100	99.123	Canis_lupus_dingo
ENSDORG00000000858	Prpf18	100	98.830	ENSCHIG00000000499	-	100	98.830	Capra_hircus
ENSDORG00000000858	Prpf18	100	98.830	ENSTSYG00000003517	-	100	98.830	Carlito_syrichta
ENSDORG00000000858	Prpf18	100	99.123	ENSCPOG00000021069	-	100	99.123	Cavia_porcellus
ENSDORG00000000858	Prpf18	100	98.538	ENSCCAG00000036822	-	100	98.538	Cebus_capucinus
ENSDORG00000000858	Prpf18	100	88.012	ENSCATG00000016633	-	100	88.012	Cercocebus_atys
ENSDORG00000000858	Prpf18	100	98.830	ENSCLAG00000011770	-	100	98.830	Chinchilla_lanigera
ENSDORG00000000858	Prpf18	100	96.581	ENSCSAG00000013109	-	100	96.581	Chlorocebus_sabaeus
ENSDORG00000000858	Prpf18	100	88.483	ENSCPBG00000003100	-	100	89.045	Chrysemys_picta_bellii
ENSDORG00000000858	Prpf18	99	54.706	ENSCING00000020481	-	97	54.706	Ciona_intestinalis
ENSDORG00000000858	Prpf18	99	54.046	ENSCSAVG00000010546	-	99	54.070	Ciona_savignyi
ENSDORG00000000858	Prpf18	100	98.830	ENSCANG00000034900	-	100	98.830	Colobus_angolensis_palliatus
ENSDORG00000000858	Prpf18	100	98.538	ENSCGRG00001023665	Prpf18	100	98.538	Cricetulus_griseus_chok1gshd
ENSDORG00000000858	Prpf18	100	98.538	ENSCGRG00000014690	Prpf18	100	98.538	Cricetulus_griseus_crigri
ENSDORG00000000858	Prpf18	100	82.164	ENSCSEG00000005536	prpf18	99	82.164	Cynoglossus_semilaevis
ENSDORG00000000858	Prpf18	100	83.626	ENSCVAG00000012401	prpf18	100	83.626	Cyprinodon_variegatus
ENSDORG00000000858	Prpf18	100	85.380	ENSDARG00000058306	prpf18	100	85.380	Danio_rerio
ENSDORG00000000858	Prpf18	100	98.538	ENSDNOG00000035607	-	100	98.538	Dasypus_novemcinctus
ENSDORG00000000858	Prpf18	99	51.327	FBgn0027784	Prp18	98	51.032	Drosophila_melanogaster
ENSDORG00000000858	Prpf18	100	86.842	ENSETEG00000015060	-	100	86.842	Echinops_telfairi
ENSDORG00000000858	Prpf18	100	66.282	ENSEBUG00000016502	prpf18	99	65.418	Eptatretus_burgeri
ENSDORG00000000858	Prpf18	100	98.830	ENSEASG00005019373	-	100	98.830	Equus_asinus_asinus
ENSDORG00000000858	Prpf18	100	98.830	ENSECAG00000006997	PRPF18	100	98.830	Equus_caballus
ENSDORG00000000858	Prpf18	92	62.975	ENSEEUG00000001171	-	100	62.975	Erinaceus_europaeus
ENSDORG00000000858	Prpf18	100	81.633	ENSELUG00000022190	prpf18	100	81.633	Esox_lucius
ENSDORG00000000858	Prpf18	100	98.830	ENSFCAG00000004436	-	100	98.830	Felis_catus
ENSDORG00000000858	Prpf18	92	87.462	ENSFALG00000001912	-	97	88.308	Ficedula_albicollis
ENSDORG00000000858	Prpf18	99	64.928	ENSFDAG00000010713	-	97	64.928	Fukomys_damarensis
ENSDORG00000000858	Prpf18	94	98.750	ENSFDAG00000014026	-	100	98.750	Fukomys_damarensis
ENSDORG00000000858	Prpf18	80	88.645	ENSFHEG00000020125	prpf18	98	88.764	Fundulus_heteroclitus
ENSDORG00000000858	Prpf18	99	79.472	ENSGMOG00000012210	prpf18	99	79.472	Gadus_morhua
ENSDORG00000000858	Prpf18	100	91.520	ENSGALG00000043593	-	100	91.520	Gallus_gallus
ENSDORG00000000858	Prpf18	100	82.456	ENSGAFG00000006034	prpf18	100	82.456	Gambusia_affinis
ENSDORG00000000858	Prpf18	100	80.994	ENSGACG00000012232	prpf18	100	80.994	Gasterosteus_aculeatus
ENSDORG00000000858	Prpf18	100	91.813	ENSGAGG00000016878	-	100	91.813	Gopherus_agassizii
ENSDORG00000000858	Prpf18	92	99.051	ENSGGOG00000025188	-	96	99.051	Gorilla_gorilla
ENSDORG00000000858	Prpf18	100	84.211	ENSHBUG00000010264	prpf18	100	84.211	Haplochromis_burtoni
ENSDORG00000000858	Prpf18	100	99.708	ENSHGLG00000018534	PRPF18	100	99.708	Heterocephalus_glaber_female
ENSDORG00000000858	Prpf18	94	99.688	ENSHGLG00100012161	-	98	99.688	Heterocephalus_glaber_male
ENSDORG00000000858	Prpf18	100	83.626	ENSHCOG00000015987	prpf18	100	83.626	Hippocampus_comes
ENSDORG00000000858	Prpf18	100	81.870	ENSIPUG00000007432	prpf18	100	82.720	Ictalurus_punctatus
ENSDORG00000000858	Prpf18	100	97.368	ENSSTOG00000008735	-	100	97.368	Ictidomys_tridecemlineatus
ENSDORG00000000858	Prpf18	100	72.046	ENSJJAG00000015191	-	100	72.046	Jaculus_jaculus
ENSDORG00000000858	Prpf18	100	99.123	ENSJJAG00000024041	-	100	99.123	Jaculus_jaculus
ENSDORG00000000858	Prpf18	100	82.456	ENSKMAG00000012124	prpf18	100	82.456	Kryptolebias_marmoratus
ENSDORG00000000858	Prpf18	99	83.136	ENSLBEG00000028466	prpf18	99	83.136	Labrus_bergylta
ENSDORG00000000858	Prpf18	100	86.257	ENSLACG00000009885	prpf18	100	86.257	Latimeria_chalumnae
ENSDORG00000000858	Prpf18	100	89.766	ENSLOCG00000016736	prpf18	100	89.766	Lepisosteus_oculatus
ENSDORG00000000858	Prpf18	100	99.123	ENSLAFG00000007753	-	100	99.123	Loxodonta_africana
ENSDORG00000000858	Prpf18	100	99.123	ENSMFAG00000000540	-	100	99.123	Macaca_fascicularis
ENSDORG00000000858	Prpf18	100	99.123	ENSMMUG00000015071	PRPF18	100	99.123	Macaca_mulatta
ENSDORG00000000858	Prpf18	100	99.123	ENSMNEG00000024679	-	100	99.123	Macaca_nemestrina
ENSDORG00000000858	Prpf18	100	83.918	ENSMLEG00000031715	-	100	83.918	Mandrillus_leucophaeus
ENSDORG00000000858	Prpf18	100	82.749	ENSMAMG00000006610	prpf18	100	82.749	Mastacembelus_armatus
ENSDORG00000000858	Prpf18	100	84.211	ENSMZEG00005019392	prpf18	100	84.211	Maylandia_zebra
ENSDORG00000000858	Prpf18	100	91.520	ENSMGAG00000005023	-	100	91.520	Meleagris_gallopavo
ENSDORG00000000858	Prpf18	100	98.830	ENSMICG00000006572	-	100	98.830	Microcebus_murinus
ENSDORG00000000858	Prpf18	100	99.123	ENSMOCG00000021468	Prpf18	100	99.123	Microtus_ochrogaster
ENSDORG00000000858	Prpf18	100	82.456	ENSMMOG00000013012	prpf18	100	82.456	Mola_mola
ENSDORG00000000858	Prpf18	96	90.237	ENSMODG00000016902	-	92	90.237	Monodelphis_domestica
ENSDORG00000000858	Prpf18	100	85.088	ENSMODG00000024043	-	100	85.088	Monodelphis_domestica
ENSDORG00000000858	Prpf18	100	77.429	ENSMALG00000005486	prpf18	100	77.714	Monopterus_albus
ENSDORG00000000858	Prpf18	100	98.538	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSDORG00000000858	Prpf18	100	98.246	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSDORG00000000858	Prpf18	100	98.830	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSDORG00000000858	Prpf18	100	97.953	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSDORG00000000858	Prpf18	100	98.830	ENSMPUG00000000938	-	100	98.830	Mustela_putorius_furo
ENSDORG00000000858	Prpf18	100	98.246	ENSMLUG00000009200	-	100	98.246	Myotis_lucifugus
ENSDORG00000000858	Prpf18	67	91.304	ENSNGAG00000023550	-	82	91.304	Nannospalax_galili
ENSDORG00000000858	Prpf18	100	98.538	ENSNGAG00000012500	-	100	98.538	Nannospalax_galili
ENSDORG00000000858	Prpf18	100	84.211	ENSNBRG00000001778	prpf18	100	84.211	Neolamprologus_brichardi
ENSDORG00000000858	Prpf18	100	99.123	ENSNLEG00000012186	-	100	99.123	Nomascus_leucogenys
ENSDORG00000000858	Prpf18	100	64.620	ENSMEUG00000005032	-	100	64.620	Notamacropus_eugenii
ENSDORG00000000858	Prpf18	77	80.377	ENSOPRG00000002153	-	100	80.377	Ochotona_princeps
ENSDORG00000000858	Prpf18	100	98.830	ENSODEG00000003770	-	100	98.830	Octodon_degus
ENSDORG00000000858	Prpf18	98	83.582	ENSONIG00000014854	prpf18	96	83.582	Oreochromis_niloticus
ENSDORG00000000858	Prpf18	100	94.444	ENSOANG00000015404	-	100	94.444	Ornithorhynchus_anatinus
ENSDORG00000000858	Prpf18	100	99.415	ENSOCUG00000027756	-	100	94.737	Oryctolagus_cuniculus
ENSDORG00000000858	Prpf18	100	81.429	ENSORLG00000010293	prpf18	100	81.429	Oryzias_latipes
ENSDORG00000000858	Prpf18	100	83.626	ENSORLG00020001530	prpf18	100	83.626	Oryzias_latipes_hni
ENSDORG00000000858	Prpf18	100	83.918	ENSORLG00015013705	prpf18	100	83.918	Oryzias_latipes_hsok
ENSDORG00000000858	Prpf18	100	84.795	ENSOMEG00000009167	prpf18	100	84.795	Oryzias_melastigma
ENSDORG00000000858	Prpf18	100	98.538	ENSOGAG00000007294	-	100	98.538	Otolemur_garnettii
ENSDORG00000000858	Prpf18	100	96.296	ENSOARG00000006243	-	100	96.296	Ovis_aries
ENSDORG00000000858	Prpf18	100	99.123	ENSPPAG00000041959	-	100	99.123	Pan_paniscus
ENSDORG00000000858	Prpf18	100	98.830	ENSPPRG00000000107	-	100	98.830	Panthera_pardus
ENSDORG00000000858	Prpf18	100	98.538	ENSPTIG00000021094	-	100	98.538	Panthera_tigris_altaica
ENSDORG00000000858	Prpf18	100	99.123	ENSPTRG00000002306	PRPF18	100	99.123	Pan_troglodytes
ENSDORG00000000858	Prpf18	100	99.415	ENSPANG00000023346	-	100	99.415	Papio_anubis
ENSDORG00000000858	Prpf18	86	98.113	ENSPKIG00000014128	prpf18	96	81.481	Paramormyrops_kingsleyae
ENSDORG00000000858	Prpf18	100	92.105	ENSPSIG00000016064	-	100	92.105	Pelodiscus_sinensis
ENSDORG00000000858	Prpf18	100	78.070	ENSPMGG00000016486	prpf18	100	78.070	Periophthalmus_magnuspinnatus
ENSDORG00000000858	Prpf18	100	98.830	ENSPEMG00000013704	Prpf18	100	98.830	Peromyscus_maniculatus_bairdii
ENSDORG00000000858	Prpf18	100	74.277	ENSPMAG00000000204	prpf18	100	74.277	Petromyzon_marinus
ENSDORG00000000858	Prpf18	92	95.886	ENSPCIG00000012963	-	99	95.886	Phascolarctos_cinereus
ENSDORG00000000858	Prpf18	100	81.143	ENSPFOG00000017611	prpf18	100	81.143	Poecilia_formosa
ENSDORG00000000858	Prpf18	100	82.749	ENSPLAG00000000369	prpf18	100	82.749	Poecilia_latipinna
ENSDORG00000000858	Prpf18	100	82.749	ENSPMEG00000005183	prpf18	100	82.749	Poecilia_mexicana
ENSDORG00000000858	Prpf18	100	82.164	ENSPREG00000015232	prpf18	100	82.164	Poecilia_reticulata
ENSDORG00000000858	Prpf18	100	98.830	ENSPPYG00000002101	PRPF18	100	98.830	Pongo_abelii
ENSDORG00000000858	Prpf18	100	80.117	ENSPCAG00000010833	-	100	80.117	Procavia_capensis
ENSDORG00000000858	Prpf18	100	91.520	ENSPCOG00000013057	-	100	91.520	Propithecus_coquereli
ENSDORG00000000858	Prpf18	100	60.819	ENSPVAG00000002947	-	100	60.819	Pteropus_vampyrus
ENSDORG00000000858	Prpf18	100	84.211	ENSPNYG00000003554	prpf18	100	84.211	Pundamilia_nyererei
ENSDORG00000000858	Prpf18	100	84.615	ENSPNAG00000023151	prpf18	100	84.615	Pygocentrus_nattereri
ENSDORG00000000858	Prpf18	100	97.953	ENSRNOG00000018396	Prpf18	100	97.953	Rattus_norvegicus
ENSDORG00000000858	Prpf18	100	98.538	ENSRBIG00000028028	-	100	98.538	Rhinopithecus_bieti
ENSDORG00000000858	Prpf18	100	98.830	ENSRROG00000040695	-	100	98.830	Rhinopithecus_roxellana
ENSDORG00000000858	Prpf18	100	98.538	ENSSBOG00000034482	-	100	98.538	Saimiri_boliviensis_boliviensis
ENSDORG00000000858	Prpf18	100	95.906	ENSSHAG00000016463	-	100	95.906	Sarcophilus_harrisii
ENSDORG00000000858	Prpf18	100	76.901	ENSSHAG00000009669	-	100	76.901	Sarcophilus_harrisii
ENSDORG00000000858	Prpf18	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSDORG00000000858	Prpf18	98	80.580	ENSSFOG00015022118	prpf18	100	76.369	Scleropages_formosus
ENSDORG00000000858	Prpf18	100	82.456	ENSSMAG00000005308	prpf18	100	82.456	Scophthalmus_maximus
ENSDORG00000000858	Prpf18	100	84.503	ENSSDUG00000015428	prpf18	100	84.503	Seriola_dumerili
ENSDORG00000000858	Prpf18	100	84.503	ENSSLDG00000023989	prpf18	100	84.503	Seriola_lalandi_dorsalis
ENSDORG00000000858	Prpf18	100	68.713	ENSSARG00000005307	-	100	68.713	Sorex_araneus
ENSDORG00000000858	Prpf18	100	91.813	ENSSPUG00000002619	-	100	91.813	Sphenodon_punctatus
ENSDORG00000000858	Prpf18	100	83.918	ENSSPAG00000019502	prpf18	100	83.918	Stegastes_partitus
ENSDORG00000000858	Prpf18	100	99.123	ENSSSCG00000026354	-	100	99.123	Sus_scrofa
ENSDORG00000000858	Prpf18	100	91.520	ENSTGUG00000002286	-	100	91.520	Taeniopygia_guttata
ENSDORG00000000858	Prpf18	100	81.579	ENSTRUG00000011278	prpf18	100	81.579	Takifugu_rubripes
ENSDORG00000000858	Prpf18	100	81.871	ENSTNIG00000000911	prpf18	100	81.871	Tetraodon_nigroviridis
ENSDORG00000000858	Prpf18	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSDORG00000000858	Prpf18	100	98.830	ENSTTRG00000011117	PRPF18	100	98.830	Tursiops_truncatus
ENSDORG00000000858	Prpf18	95	95.692	ENSUAMG00000001815	-	94	95.692	Ursus_americanus
ENSDORG00000000858	Prpf18	100	94.152	ENSUMAG00000012329	-	100	94.152	Ursus_maritimus
ENSDORG00000000858	Prpf18	100	92.982	ENSVPAG00000011486	-	100	92.982	Vicugna_pacos
ENSDORG00000000858	Prpf18	100	99.123	ENSVVUG00000005453	-	100	99.123	Vulpes_vulpes
ENSDORG00000000858	Prpf18	100	80.290	ENSXETG00000024057	prpf18	100	80.290	Xenopus_tropicalis
ENSDORG00000000858	Prpf18	100	81.977	ENSXCOG00000020414	prpf18	100	81.977	Xiphophorus_couchianus
ENSDORG00000000858	Prpf18	100	82.456	ENSXMAG00000004713	prpf18	91	82.456	Xiphophorus_maculatus