EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000000998 (Gene tree)
Gene ID: 105995524
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation specific factor 7
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 39271 bases
Position: chrKN672463.1:1396690-1435960
Accession: 105995524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000000938	RRM_1	PF00076.22	2.7e-06	1	1
ENSDORP00000020373	RRM_1	PF00076.22	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000000999	-	3557	XM_013029268	ENSDORP00000000938	462 (aa)	XP_012884722	A0A1S3G9M2
ENSDORT00000029212	-	3617	XM_013029264	ENSDORP00000020373	471 (aa)	XP_012884718	A0A1S3G7R5

Gene Model

Click here to download ENSDORG00000000998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000000998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000000998	-	73	59.429	ENSDORG00000002950	Cpsf6	74	52.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000000998	-	73	57.558	ENSAPOG00000009771	-	95	45.603	Acanthochromis_polyacanthus
ENSDORG00000000998	-	73	57.558	ENSAOCG00000024134	-	95	41.899	Amphiprion_ocellaris
ENSDORG00000000998	-	73	53.889	ENSAPEG00000004361	-	95	45.399	Amphiprion_percula
ENSDORG00000000998	-	73	57.471	ENSATEG00000014806	-	95	41.636	Anabas_testudineus
ENSDORG00000000998	-	54	60.584	ENSAPLG00000010887	CPSF6	61	60.584	Anas_platyrhynchos
ENSDORG00000000998	-	97	86.577	ENSCPBG00000017691	-	96	86.577	Chrysemys_picta_bellii
ENSDORG00000000998	-	81	57.143	ENSGALG00000019355	CPSF6	76	56.410	Gallus_gallus