EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000001099 (Gene tree)
Gene ID: 105981395
Gene Symbol: Rad18
Alias: 2810024C04Rik
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 86818 bases
Position: chrKN672358.1:4076515-4163332
Accession: 105981395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000001033	SAP	PF02037.27	4.3e-12	1	1
ENSDORP00000021362	SAP	PF02037.27	4.6e-12	1	1
ENSDORP00000026104	SAP	PF02037.27	4.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000032389	-	1446	-	ENSDORP00000021362	481 (aa)	-	UPI000BAD0475
ENSDORT00000001099	-	1374	-	ENSDORP00000001033	457 (aa)	-	UPI000BACEE5B
ENSDORT00000028675	-	1509	XM_013010563	ENSDORP00000026104	502 (aa)	XP_012866017	UPI000BAD1043

Gene Model

Click here to download ENSDORG00000001099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000001099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000001099	Rad18	100	75.794	ENSG00000070950	RAD18	99	88.889	Homo_sapiens
ENSDORG00000001099	Rad18	87	39.104	ENSAPOG00000005260	rad18	52	43.182	Acanthochromis_polyacanthus
ENSDORG00000001099	Rad18	100	79.772	ENSAMEG00000012375	RAD18	100	68.531	Ailuropoda_melanoleuca
ENSDORG00000001099	Rad18	75	41.223	ENSACIG00000020655	rad18	63	54.930	Amphilophus_citrinellus
ENSDORG00000001099	Rad18	74	45.729	ENSAOCG00000004507	rad18	79	45.960	Amphiprion_ocellaris
ENSDORG00000001099	Rad18	75	45.195	ENSAPEG00000016837	rad18	58	58.235	Amphiprion_percula
ENSDORG00000001099	Rad18	95	48.240	ENSAPLG00000003138	RAD18	100	47.925	Anas_platyrhynchos
ENSDORG00000001099	Rad18	100	76.587	ENSANAG00000033360	RAD18	100	75.992	Aotus_nancymaae
ENSDORG00000001099	Rad18	75	42.480	ENSACLG00000023506	rad18	82	41.013	Astatotilapia_calliptera
ENSDORG00000001099	Rad18	86	40.708	ENSAMXG00000002534	rad18	96	41.031	Astyanax_mexicanus
ENSDORG00000001099	Rad18	100	76.471	ENSBTAG00000012142	RAD18	100	75.381	Bos_taurus
ENSDORG00000001099	Rad18	100	75.794	ENSCJAG00000040303	RAD18	100	75.198	Callithrix_jacchus
ENSDORG00000001099	Rad18	100	76.087	ENSCAFG00000005548	RAD18	100	75.296	Canis_familiaris
ENSDORG00000001099	Rad18	100	76.087	ENSCAFG00020009228	RAD18	100	75.296	Canis_lupus_dingo
ENSDORG00000001099	Rad18	100	77.124	ENSCHIG00000007965	RAD18	100	76.035	Capra_hircus
ENSDORG00000001099	Rad18	100	76.285	ENSTSYG00000012189	RAD18	100	75.494	Carlito_syrichta
ENSDORG00000001099	Rad18	95	73.700	ENSCAPG00000000356	RAD18	100	71.396	Cavia_aperea
ENSDORG00000001099	Rad18	100	75.299	ENSCPOG00000013890	RAD18	100	74.502	Cavia_porcellus
ENSDORG00000001099	Rad18	100	76.389	ENSCCAG00000022920	RAD18	100	75.794	Cebus_capucinus
ENSDORG00000001099	Rad18	100	75.992	ENSCATG00000039277	RAD18	100	76.190	Cercocebus_atys
ENSDORG00000001099	Rad18	100	76.740	ENSCLAG00000003652	RAD18	100	75.547	Chinchilla_lanigera
ENSDORG00000001099	Rad18	100	75.787	ENSCSAG00000010783	RAD18	100	75.787	Chlorocebus_sabaeus
ENSDORG00000001099	Rad18	99	50.000	ENSCPBG00000014787	RAD18	99	51.702	Chrysemys_picta_bellii
ENSDORG00000001099	Rad18	100	75.644	ENSCANG00000007308	RAD18	100	75.644	Colobus_angolensis_palliatus
ENSDORG00000001099	Rad18	100	77.681	ENSCGRG00001018154	-	100	77.243	Cricetulus_griseus_chok1gshd
ENSDORG00000001099	Rad18	100	73.465	ENSCGRG00001010209	-	100	73.069	Cricetulus_griseus_chok1gshd
ENSDORG00000001099	Rad18	100	77.681	ENSCGRG00000007283	-	100	77.243	Cricetulus_griseus_crigri
ENSDORG00000001099	Rad18	100	73.663	ENSCGRG00000019636	-	100	73.267	Cricetulus_griseus_crigri
ENSDORG00000001099	Rad18	88	41.920	ENSCSEG00000002516	rad18	93	41.920	Cynoglossus_semilaevis
ENSDORG00000001099	Rad18	76	45.739	ENSDARG00000027938	rad18	82	44.772	Danio_rerio
ENSDORG00000001099	Rad18	100	74.950	ENSDNOG00000040055	RAD18	100	74.155	Dasypus_novemcinctus
ENSDORG00000001099	Rad18	93	60.802	ENSETEG00000002268	RAD18	100	60.356	Echinops_telfairi
ENSDORG00000001099	Rad18	100	78.968	ENSEASG00005013316	RAD18	94	78.968	Equus_asinus_asinus
ENSDORG00000001099	Rad18	100	78.968	ENSECAG00000010746	RAD18	94	78.968	Equus_caballus
ENSDORG00000001099	Rad18	71	68.308	ENSEEUG00000000236	-	73	68.308	Erinaceus_europaeus
ENSDORG00000001099	Rad18	78	42.998	ENSELUG00000000733	rad18	82	42.998	Esox_lucius
ENSDORG00000001099	Rad18	100	77.183	ENSFCAG00000025747	RAD18	100	76.389	Felis_catus
ENSDORG00000001099	Rad18	87	52.983	ENSFALG00000013625	RAD18	83	55.080	Ficedula_albicollis
ENSDORG00000001099	Rad18	100	75.595	ENSFDAG00000009907	RAD18	100	73.810	Fukomys_damarensis
ENSDORG00000001099	Rad18	97	50.219	ENSGALG00000008368	RAD18	93	50.427	Gallus_gallus
ENSDORG00000001099	Rad18	75	44.633	ENSGACG00000000920	rad18	79	44.205	Gasterosteus_aculeatus
ENSDORG00000001099	Rad18	93	50.000	ENSGAGG00000005184	RAD18	100	50.211	Gopherus_agassizii
ENSDORG00000001099	Rad18	100	76.587	ENSGGOG00000008391	RAD18	100	76.587	Gorilla_gorilla
ENSDORG00000001099	Rad18	66	44.951	ENSHBUG00000013322	rad18	81	43.344	Haplochromis_burtoni
ENSDORG00000001099	Rad18	66	81.333	ENSHGLG00000009196	-	96	80.000	Heterocephalus_glaber_female
ENSDORG00000001099	Rad18	66	81.333	ENSHGLG00100017675	-	96	80.000	Heterocephalus_glaber_male
ENSDORG00000001099	Rad18	82	40.750	ENSIPUG00000018681	rad18	90	38.889	Ictalurus_punctatus
ENSDORG00000001099	Rad18	66	79.000	ENSSTOG00000004870	-	96	78.667	Ictidomys_tridecemlineatus
ENSDORG00000001099	Rad18	100	79.212	ENSJJAG00000001484	Rad18	100	78.556	Jaculus_jaculus
ENSDORG00000001099	Rad18	76	43.570	ENSKMAG00000020725	rad18	77	43.182	Kryptolebias_marmoratus
ENSDORG00000001099	Rad18	63	51.485	ENSLACG00000018437	RAD18	95	52.318	Latimeria_chalumnae
ENSDORG00000001099	Rad18	77	50.000	ENSLOCG00000010629	rad18	95	44.635	Lepisosteus_oculatus
ENSDORG00000001099	Rad18	88	74.929	ENSLAFG00000004667	RAD18	100	65.644	Loxodonta_africana
ENSDORG00000001099	Rad18	100	76.190	ENSMFAG00000028864	RAD18	100	76.190	Macaca_fascicularis
ENSDORG00000001099	Rad18	100	76.190	ENSMMUG00000020013	RAD18	100	76.190	Macaca_mulatta
ENSDORG00000001099	Rad18	100	76.190	ENSMNEG00000013464	RAD18	100	76.190	Macaca_nemestrina
ENSDORG00000001099	Rad18	100	75.595	ENSMLEG00000014306	RAD18	100	75.595	Mandrillus_leucophaeus
ENSDORG00000001099	Rad18	76	40.786	ENSMAMG00000023936	rad18	86	39.558	Mastacembelus_armatus
ENSDORG00000001099	Rad18	75	42.593	ENSMZEG00005010577	rad18	70	40.759	Maylandia_zebra
ENSDORG00000001099	Rad18	95	49.383	ENSMGAG00000010131	RAD18	100	48.566	Meleagris_gallopavo
ENSDORG00000001099	Rad18	100	77.024	ENSMAUG00000020642	Rad18	100	76.586	Mesocricetus_auratus
ENSDORG00000001099	Rad18	97	76.687	ENSMICG00000013536	RAD18	99	76.687	Microcebus_murinus
ENSDORG00000001099	Rad18	100	76.586	ENSMOCG00000009114	Rad18	100	76.149	Microtus_ochrogaster
ENSDORG00000001099	Rad18	75	41.842	ENSMMOG00000021793	rad18	98	41.514	Mola_mola
ENSDORG00000001099	Rad18	96	58.097	ENSMODG00000004679	RAD18	94	58.300	Monodelphis_domestica
ENSDORG00000001099	Rad18	100	76.242	MGP_CAROLIEiJ_G0028712	Rad18	100	76.026	Mus_caroli
ENSDORG00000001099	Rad18	100	77.299	ENSMUSG00000030254	Rad18	100	74.891	Mus_musculus
ENSDORG00000001099	Rad18	99	78.551	MGP_PahariEiJ_G0022463	Rad18	100	76.586	Mus_pahari
ENSDORG00000001099	Rad18	99	77.971	MGP_SPRETEiJ_G0029740	Rad18	99	95.312	Mus_spretus
ENSDORG00000001099	Rad18	100	77.381	ENSMPUG00000017063	RAD18	100	76.587	Mustela_putorius_furo
ENSDORG00000001099	Rad18	100	73.294	ENSMLUG00000016494	RAD18	100	72.710	Myotis_lucifugus
ENSDORG00000001099	Rad18	100	80.568	ENSNGAG00000012464	Rad18	100	79.258	Nannospalax_galili
ENSDORG00000001099	Rad18	100	76.541	ENSNLEG00000003789	RAD18	100	76.541	Nomascus_leucogenys
ENSDORG00000001099	Rad18	71	53.061	ENSMEUG00000003444	-	82	52.770	Notamacropus_eugenii
ENSDORG00000001099	Rad18	100	68.849	ENSOPRG00000013856	RAD18	100	68.056	Ochotona_princeps
ENSDORG00000001099	Rad18	66	78.333	ENSODEG00000018158	RAD18	97	78.000	Octodon_degus
ENSDORG00000001099	Rad18	79	43.223	ENSONIG00000018979	rad18	88	40.678	Oreochromis_niloticus
ENSDORG00000001099	Rad18	100	72.421	ENSOCUG00000000013	RAD18	100	71.627	Oryctolagus_cuniculus
ENSDORG00000001099	Rad18	75	40.761	ENSORLG00000029026	rad18	95	41.011	Oryzias_latipes
ENSDORG00000001099	Rad18	100	75.787	ENSOGAG00000001410	RAD18	100	74.803	Otolemur_garnettii
ENSDORG00000001099	Rad18	100	75.049	ENSOARG00000007445	RAD18	100	74.067	Ovis_aries
ENSDORG00000001099	Rad18	100	76.587	ENSPPAG00000035797	RAD18	100	76.587	Pan_paniscus
ENSDORG00000001099	Rad18	100	77.183	ENSPPRG00000004021	RAD18	100	76.389	Panthera_pardus
ENSDORG00000001099	Rad18	100	77.183	ENSPTIG00000008602	RAD18	100	76.389	Panthera_tigris_altaica
ENSDORG00000001099	Rad18	100	76.190	ENSPTRG00000014583	RAD18	100	76.190	Pan_troglodytes
ENSDORG00000001099	Rad18	100	76.190	ENSPANG00000008855	RAD18	100	76.190	Papio_anubis
ENSDORG00000001099	Rad18	99	49.427	ENSPSIG00000006928	RAD18	99	49.606	Pelodiscus_sinensis
ENSDORG00000001099	Rad18	74	44.126	ENSPMGG00000013294	rad18	99	44.126	Periophthalmus_magnuspinnatus
ENSDORG00000001099	Rad18	100	77.243	ENSPEMG00000022129	Rad18	100	76.586	Peromyscus_maniculatus_bairdii
ENSDORG00000001099	Rad18	92	59.821	ENSPCIG00000024872	RAD18	95	59.598	Phascolarctos_cinereus
ENSDORG00000001099	Rad18	75	42.895	ENSPFOG00000002722	rad18	97	42.667	Poecilia_formosa
ENSDORG00000001099	Rad18	100	76.389	ENSPPYG00000013688	RAD18	100	76.389	Pongo_abelii
ENSDORG00000001099	Rad18	93	59.448	ENSPCAG00000008229	RAD18	97	57.298	Procavia_capensis
ENSDORG00000001099	Rad18	100	75.697	ENSPVAG00000012220	RAD18	100	75.100	Pteropus_vampyrus
ENSDORG00000001099	Rad18	75	42.480	ENSPNYG00000006815	rad18	76	40.759	Pundamilia_nyererei
ENSDORG00000001099	Rad18	78	41.076	ENSPNAG00000016082	rad18	96	37.310	Pygocentrus_nattereri
ENSDORG00000001099	Rad18	100	76.892	ENSRNOG00000005907	Rad18	100	77.092	Rattus_norvegicus
ENSDORG00000001099	Rad18	100	74.851	ENSRBIG00000044173	RAD18	100	74.851	Rhinopithecus_bieti
ENSDORG00000001099	Rad18	100	76.587	ENSRROG00000043948	RAD18	100	76.587	Rhinopithecus_roxellana
ENSDORG00000001099	Rad18	100	76.587	ENSSBOG00000008434	-	100	75.992	Saimiri_boliviensis_boliviensis
ENSDORG00000001099	Rad18	75	59.726	ENSSHAG00000012472	-	89	59.890	Sarcophilus_harrisii
ENSDORG00000001099	Rad18	82	42.308	ENSSFOG00015019264	rad18	84	43.552	Scleropages_formosus
ENSDORG00000001099	Rad18	65	57.616	ENSSPUG00000017486	RAD18	97	57.525	Sphenodon_punctatus
ENSDORG00000001099	Rad18	75	45.767	ENSSPAG00000007165	rad18	77	45.524	Stegastes_partitus
ENSDORG00000001099	Rad18	100	77.228	ENSSSCG00000026158	RAD18	100	76.436	Sus_scrofa
ENSDORG00000001099	Rad18	79	53.046	ENSTGUG00000010405	RAD18	86	52.792	Taeniopygia_guttata
ENSDORG00000001099	Rad18	75	43.575	ENSTRUG00000003517	rad18	99	44.044	Takifugu_rubripes
ENSDORG00000001099	Rad18	75	46.197	ENSTNIG00000014625	rad18	99	44.565	Tetraodon_nigroviridis
ENSDORG00000001099	Rad18	100	77.092	ENSTTRG00000005034	RAD18	100	76.494	Tursiops_truncatus
ENSDORG00000001099	Rad18	63	59.790	ENSUAMG00000009763	-	84	59.790	Ursus_americanus
ENSDORG00000001099	Rad18	100	77.381	ENSUMAG00000019279	RAD18	100	76.587	Ursus_maritimus
ENSDORG00000001099	Rad18	91	70.241	ENSVPAG00000002063	RAD18	97	69.803	Vicugna_pacos
ENSDORG00000001099	Rad18	100	75.494	ENSVVUG00000025318	RAD18	100	74.704	Vulpes_vulpes
ENSDORG00000001099	Rad18	75	52.394	ENSXETG00000033878	RAD18	98	51.862	Xenopus_tropicalis
ENSDORG00000001099	Rad18	75	38.770	ENSXCOG00000020018	rad18	95	38.770	Xiphophorus_couchianus
ENSDORG00000001099	Rad18	75	39.037	ENSXMAG00000001516	rad18	94	38.978	Xiphophorus_maculatus