EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000001140 (Gene tree)
Gene ID: -
Gene Symbol: Papolb
Alias: Papola-ps|Papt|Plap-ps|TPAP
Full Name: poly(A) polymerase beta
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 2360 bases
Position: chrKN672414.1:4381960-4384319
Accession: 105990934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000021215	PAP_RNA-bind	PF04926.15	7.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000001137	-	1905	XM_013023465	ENSDORP00000021215	634 (aa)	XP_012878919	UPI000BAD0F63

Gene Model

Click here to download ENSDORG00000001140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000001140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000001140	Papolb	60	80.526	ENSDORG00000013415	-	81	80.840
ENSDORG00000001140	Papolb	65	78.589	ENSDORG00000016228	Papolg	96	78.589

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000001140	Papolb	100	84.882	ENSG00000218823	PAPOLB	96	86.016	Homo_sapiens
ENSDORG00000001140	Papolb	100	80.472	ENSANAG00000033074	PAPOLB	97	81.686	Aotus_nancymaae
ENSDORG00000001140	Papolb	99	84.762	ENSBTAG00000052734	PAPOLB	89	85.948	Bos_taurus
ENSDORG00000001140	Papolb	85	80.663	ENSCPOG00000021527	PAPOLB	97	79.603	Cavia_porcellus
ENSDORG00000001140	Papolb	99	85.056	ENSCLAG00000004689	PAPOLB	96	86.297	Chinchilla_lanigera
ENSDORG00000001140	Papolb	97	84.304	ENSDNOG00000033378	PAPOLB	87	84.779	Dasypus_novemcinctus
ENSDORG00000001140	Papolb	96	87.685	ENSEASG00005021531	PAPOLB	89	87.582	Equus_asinus_asinus
ENSDORG00000001140	Papolb	96	77.558	ENSHGLG00000002987	-	99	77.558	Heterocephalus_glaber_female
ENSDORG00000001140	Papolb	97	89.560	ENSJJAG00000012212	Papolb	88	89.577	Jaculus_jaculus
ENSDORG00000001140	Papolb	87	89.111	ENSMFAG00000031074	PAPOLB	97	90.432	Macaca_fascicularis
ENSDORG00000001140	Papolb	98	86.699	ENSMMUG00000043732	PAPOLB	87	87.789	Macaca_mulatta
ENSDORG00000001140	Papolb	99	89.382	MGP_CAROLIEiJ_G0027962	Papolb	95	90.701	Mus_caroli
ENSDORG00000001140	Papolb	99	89.223	ENSMUSG00000074817	Papolb	95	90.538	Mus_musculus
ENSDORG00000001140	Papolb	99	88.906	MGP_PahariEiJ_G0024534	Papolb	95	90.375	Mus_pahari
ENSDORG00000001140	Papolb	99	89.065	MGP_SPRETEiJ_G0028966	Papolb	95	90.375	Mus_spretus
ENSDORG00000001140	Papolb	99	83.625	ENSMLUG00000029802	PAPOLB	93	84.779	Myotis_lucifugus
ENSDORG00000001140	Papolb	99	86.010	ENSODEG00000009844	PAPOLB	91	87.255	Octodon_degus
ENSDORG00000001140	Papolb	97	85.622	ENSOCUG00000022988	PAPOLB	97	89.338	Oryctolagus_cuniculus
ENSDORG00000001140	Papolb	99	87.956	ENSOGAG00000031103	PAPOLB	87	89.088	Otolemur_garnettii
ENSDORG00000001140	Papolb	98	85.417	ENSPTRG00000045383	PAPOLB	88	86.469	Pan_troglodytes
ENSDORG00000001140	Papolb	97	87.825	ENSUMAG00000007631	PAPOLB	97	87.928	Ursus_maritimus