EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000001390 (Gene tree)
Gene ID: 105997881
Gene Symbol: Tarbp2
Alias: Prbp|TRBP
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 5211 bases
Position: chrKN672501.1:1375206-1380416
Accession: 105997881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000001298	dsrm	PF00035.26	2.2e-17	1	1
ENSDORP00000022378	dsrm	PF00035.26	3.8e-17	1	1
ENSDORP00000001298	DND1_DSRM	PF14709.7	1.6e-07	1	1
ENSDORP00000022378	DND1_DSRM	PF14709.7	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000032758	-	903	-	ENSDORP00000022378	300 (aa)	-	UPI000BACFCAE
ENSDORT00000001390	-	732	XM_013032426	ENSDORP00000001298	243 (aa)	XP_012887880	UPI000BACFBDF

Gene Model

Click here to download ENSDORG00000001390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000001390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000001390	Tarbp2	92	45.291	ENSDORG00000013338	Prkra	66	44.493

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000001390	Tarbp2	100	94.298	ENSG00000139546	TARBP2	86	94.298	Homo_sapiens
ENSDORG00000001390	Tarbp2	91	71.041	ENSAPOG00000019892	tarbp2	63	71.041	Acanthochromis_polyacanthus
ENSDORG00000001390	Tarbp2	100	92.920	ENSAMEG00000012601	TARBP2	86	92.920	Ailuropoda_melanoleuca
ENSDORG00000001390	Tarbp2	91	71.493	ENSACIG00000016780	tarbp2	65	71.493	Amphilophus_citrinellus
ENSDORG00000001390	Tarbp2	91	71.493	ENSAOCG00000005201	tarbp2	63	71.493	Amphiprion_ocellaris
ENSDORG00000001390	Tarbp2	91	71.493	ENSAPEG00000008376	tarbp2	63	71.493	Amphiprion_percula
ENSDORG00000001390	Tarbp2	91	71.041	ENSATEG00000025012	tarbp2	63	71.041	Anabas_testudineus
ENSDORG00000001390	Tarbp2	93	74.890	ENSACAG00000001100	TARBP2	64	73.391	Anolis_carolinensis
ENSDORG00000001390	Tarbp2	100	94.298	ENSANAG00000034453	TARBP2	86	94.298	Aotus_nancymaae
ENSDORG00000001390	Tarbp2	91	69.683	ENSACLG00000018569	tarbp2	63	69.683	Astatotilapia_calliptera
ENSDORG00000001390	Tarbp2	87	72.038	ENSAMXG00000016665	tarbp2	63	70.588	Astyanax_mexicanus
ENSDORG00000001390	Tarbp2	100	94.248	ENSBTAG00000000435	TARBP2	86	94.248	Bos_taurus
ENSDORG00000001390	Tarbp2	100	94.737	ENSCJAG00000018668	TARBP2	86	94.737	Callithrix_jacchus
ENSDORG00000001390	Tarbp2	100	92.478	ENSCAFG00000006874	TARBP2	92	92.105	Canis_familiaris
ENSDORG00000001390	Tarbp2	100	94.248	ENSCAFG00020020735	TARBP2	86	94.248	Canis_lupus_dingo
ENSDORG00000001390	Tarbp2	100	93.805	ENSCHIG00000026017	TARBP2	85	93.805	Capra_hircus
ENSDORG00000001390	Tarbp2	100	92.982	ENSTSYG00000035683	TARBP2	86	92.982	Carlito_syrichta
ENSDORG00000001390	Tarbp2	92	92.377	ENSCAPG00000008981	TARBP2	100	91.556	Cavia_aperea
ENSDORG00000001390	Tarbp2	100	91.228	ENSCPOG00000001009	TARBP2	100	81.455	Cavia_porcellus
ENSDORG00000001390	Tarbp2	94	94.298	ENSCCAG00000033025	TARBP2	86	94.298	Cebus_capucinus
ENSDORG00000001390	Tarbp2	100	94.298	ENSCATG00000026344	TARBP2	86	94.298	Cercocebus_atys
ENSDORG00000001390	Tarbp2	100	91.667	ENSCLAG00000009175	TARBP2	100	81.818	Chinchilla_lanigera
ENSDORG00000001390	Tarbp2	100	94.298	ENSCSAG00000005479	TARBP2	86	94.298	Chlorocebus_sabaeus
ENSDORG00000001390	Tarbp2	93	73.451	ENSCPBG00000000654	TARBP2	66	73.568	Chrysemys_picta_bellii
ENSDORG00000001390	Tarbp2	100	94.298	ENSCANG00000040415	TARBP2	86	94.298	Colobus_angolensis_palliatus
ENSDORG00000001390	Tarbp2	100	95.175	ENSCGRG00001011856	TARBP2	95	95.175	Cricetulus_griseus_chok1gshd
ENSDORG00000001390	Tarbp2	100	95.175	ENSCGRG00000009088	TARBP2	95	95.175	Cricetulus_griseus_crigri
ENSDORG00000001390	Tarbp2	91	71.946	ENSCSEG00000010631	tarbp2	65	71.946	Cynoglossus_semilaevis
ENSDORG00000001390	Tarbp2	91	70.270	ENSCVAG00000009832	tarbp2	64	70.270	Cyprinodon_variegatus
ENSDORG00000001390	Tarbp2	92	71.875	ENSDARG00000070471	tarbp2	65	71.875	Danio_rerio
ENSDORG00000001390	Tarbp2	100	95.133	ENSDNOG00000002144	TARBP2	86	95.133	Dasypus_novemcinctus
ENSDORG00000001390	Tarbp2	100	91.542	ENSETEG00000002458	TARBP2	80	91.542	Echinops_telfairi
ENSDORG00000001390	Tarbp2	87	57.746	ENSEBUG00000002377	tarbp2	64	59.155	Eptatretus_burgeri
ENSDORG00000001390	Tarbp2	100	95.133	ENSEASG00005010030	TARBP2	86	95.133	Equus_asinus_asinus
ENSDORG00000001390	Tarbp2	100	95.133	ENSECAG00000011695	TARBP2	100	87.925	Equus_caballus
ENSDORG00000001390	Tarbp2	78	93.567	ENSEEUG00000001128	-	82	93.567	Erinaceus_europaeus
ENSDORG00000001390	Tarbp2	86	72.381	ENSELUG00000010642	tarbp2	65	68.996	Esox_lucius
ENSDORG00000001390	Tarbp2	100	94.690	ENSFCAG00000007757	TARBP2	86	94.690	Felis_catus
ENSDORG00000001390	Tarbp2	100	91.228	ENSFDAG00000011932	TARBP2	95	91.228	Fukomys_damarensis
ENSDORG00000001390	Tarbp2	91	71.041	ENSFHEG00000016118	tarbp2	68	71.041	Fundulus_heteroclitus
ENSDORG00000001390	Tarbp2	91	69.196	ENSGMOG00000001290	tarbp2	64	69.196	Gadus_morhua
ENSDORG00000001390	Tarbp2	92	72.646	ENSGALG00000038939	-	98	65.134	Gallus_gallus
ENSDORG00000001390	Tarbp2	91	71.041	ENSGAFG00000013341	tarbp2	63	71.041	Gambusia_affinis
ENSDORG00000001390	Tarbp2	91	69.955	ENSGACG00000006645	tarbp2	62	69.955	Gasterosteus_aculeatus
ENSDORG00000001390	Tarbp2	93	73.894	ENSGAGG00000021169	TARBP2	62	74.009	Gopherus_agassizii
ENSDORG00000001390	Tarbp2	100	94.298	ENSGGOG00000012637	TARBP2	86	94.298	Gorilla_gorilla
ENSDORG00000001390	Tarbp2	91	70.136	ENSHBUG00000018639	tarbp2	63	70.136	Haplochromis_burtoni
ENSDORG00000001390	Tarbp2	100	90.789	ENSHGLG00000001284	TARBP2	95	90.789	Heterocephalus_glaber_female
ENSDORG00000001390	Tarbp2	100	90.789	ENSHGLG00100011274	TARBP2	95	90.789	Heterocephalus_glaber_male
ENSDORG00000001390	Tarbp2	91	67.873	ENSHCOG00000001027	tarbp2	63	67.873	Hippocampus_comes
ENSDORG00000001390	Tarbp2	91	69.231	ENSIPUG00000023701	tarbp2	64	69.231	Ictalurus_punctatus
ENSDORG00000001390	Tarbp2	100	95.614	ENSSTOG00000003678	TARBP2	100	84.727	Ictidomys_tridecemlineatus
ENSDORG00000001390	Tarbp2	91	70.136	ENSKMAG00000012142	tarbp2	63	70.136	Kryptolebias_marmoratus
ENSDORG00000001390	Tarbp2	91	70.588	ENSLBEG00000015027	tarbp2	68	67.949	Labrus_bergylta
ENSDORG00000001390	Tarbp2	83	72.277	ENSLACG00000007087	TARBP2	60	71.921	Latimeria_chalumnae
ENSDORG00000001390	Tarbp2	88	73.953	ENSLOCG00000005711	tarbp2	66	69.828	Lepisosteus_oculatus
ENSDORG00000001390	Tarbp2	66	93.007	ENSLAFG00000002620	TARBP2	80	93.007	Loxodonta_africana
ENSDORG00000001390	Tarbp2	100	94.298	ENSMFAG00000013567	TARBP2	86	94.298	Macaca_fascicularis
ENSDORG00000001390	Tarbp2	100	94.298	ENSMMUG00000018492	TARBP2	86	94.298	Macaca_mulatta
ENSDORG00000001390	Tarbp2	100	94.298	ENSMNEG00000036477	TARBP2	86	94.298	Macaca_nemestrina
ENSDORG00000001390	Tarbp2	100	94.298	ENSMLEG00000029583	TARBP2	86	94.298	Mandrillus_leucophaeus
ENSDORG00000001390	Tarbp2	91	69.683	ENSMAMG00000010272	tarbp2	85	55.844	Mastacembelus_armatus
ENSDORG00000001390	Tarbp2	91	70.136	ENSMZEG00005006895	tarbp2	63	70.136	Maylandia_zebra
ENSDORG00000001390	Tarbp2	100	95.175	ENSMAUG00000019805	Tarbp2	95	95.175	Mesocricetus_auratus
ENSDORG00000001390	Tarbp2	94	95.175	ENSMICG00000027441	TARBP2	66	95.575	Microcebus_murinus
ENSDORG00000001390	Tarbp2	100	94.298	ENSMOCG00000003691	Tarbp2	87	94.298	Microtus_ochrogaster
ENSDORG00000001390	Tarbp2	91	71.171	ENSMMOG00000010374	tarbp2	84	61.071	Mola_mola
ENSDORG00000001390	Tarbp2	91	69.507	ENSMALG00000009773	tarbp2	63	69.507	Monopterus_albus
ENSDORG00000001390	Tarbp2	100	94.737	MGP_CAROLIEiJ_G0020356	Tarbp2	95	94.737	Mus_caroli
ENSDORG00000001390	Tarbp2	100	94.737	ENSMUSG00000023051	Tarbp2	95	94.737	Mus_musculus
ENSDORG00000001390	Tarbp2	100	93.421	MGP_PahariEiJ_G0020355	Tarbp2	95	93.421	Mus_pahari
ENSDORG00000001390	Tarbp2	100	94.737	MGP_SPRETEiJ_G0021249	Tarbp2	95	94.737	Mus_spretus
ENSDORG00000001390	Tarbp2	100	94.690	ENSMPUG00000005944	TARBP2	86	94.690	Mustela_putorius_furo
ENSDORG00000001390	Tarbp2	100	94.248	ENSMLUG00000010035	TARBP2	86	94.248	Myotis_lucifugus
ENSDORG00000001390	Tarbp2	100	94.298	ENSNLEG00000017690	TARBP2	86	94.298	Nomascus_leucogenys
ENSDORG00000001390	Tarbp2	93	87.611	ENSMEUG00000001916	TARBP2	98	87.611	Notamacropus_eugenii
ENSDORG00000001390	Tarbp2	92	91.928	ENSOPRG00000011397	TARBP2	100	91.111	Ochotona_princeps
ENSDORG00000001390	Tarbp2	91	70.588	ENSONIG00000005115	tarbp2	65	68.326	Oreochromis_niloticus
ENSDORG00000001390	Tarbp2	100	93.421	ENSOCUG00000005700	TARBP2	100	93.421	Oryctolagus_cuniculus
ENSDORG00000001390	Tarbp2	93	68.444	ENSORLG00000005209	tarbp2	67	67.391	Oryzias_latipes
ENSDORG00000001390	Tarbp2	92	68.750	ENSORLG00020017755	tarbp2	64	68.750	Oryzias_latipes_hni
ENSDORG00000001390	Tarbp2	92	69.196	ENSORLG00015013237	tarbp2	64	69.196	Oryzias_latipes_hsok
ENSDORG00000001390	Tarbp2	92	68.304	ENSOMEG00000018860	tarbp2	64	68.304	Oryzias_melastigma
ENSDORG00000001390	Tarbp2	100	93.860	ENSOGAG00000001744	TARBP2	86	93.860	Otolemur_garnettii
ENSDORG00000001390	Tarbp2	100	93.805	ENSOARG00000016437	TARBP2	86	93.805	Ovis_aries
ENSDORG00000001390	Tarbp2	100	94.298	ENSPPAG00000030429	TARBP2	86	94.298	Pan_paniscus
ENSDORG00000001390	Tarbp2	100	94.690	ENSPPRG00000000189	TARBP2	86	94.690	Panthera_pardus
ENSDORG00000001390	Tarbp2	100	94.690	ENSPTIG00000007859	TARBP2	88	94.690	Panthera_tigris_altaica
ENSDORG00000001390	Tarbp2	100	94.298	ENSPTRG00000005020	TARBP2	86	94.298	Pan_troglodytes
ENSDORG00000001390	Tarbp2	100	94.298	ENSPANG00000010689	TARBP2	86	94.298	Papio_anubis
ENSDORG00000001390	Tarbp2	98	67.355	ENSPKIG00000002455	tarbp2	68	67.355	Paramormyrops_kingsleyae
ENSDORG00000001390	Tarbp2	92	69.507	ENSPMGG00000006497	tarbp2	78	58.929	Periophthalmus_magnuspinnatus
ENSDORG00000001390	Tarbp2	100	93.860	ENSPEMG00000014285	Tarbp2	87	93.860	Peromyscus_maniculatus_bairdii
ENSDORG00000001390	Tarbp2	89	59.817	ENSPMAG00000000105	tarbp2	69	59.817	Petromyzon_marinus
ENSDORG00000001390	Tarbp2	93	87.611	ENSPCIG00000006672	TARBP2	87	87.611	Phascolarctos_cinereus
ENSDORG00000001390	Tarbp2	91	71.493	ENSPFOG00000007586	tarbp2	63	71.493	Poecilia_formosa
ENSDORG00000001390	Tarbp2	91	71.493	ENSPLAG00000017659	tarbp2	63	71.493	Poecilia_latipinna
ENSDORG00000001390	Tarbp2	91	71.493	ENSPMEG00000007775	tarbp2	63	71.493	Poecilia_mexicana
ENSDORG00000001390	Tarbp2	91	71.041	ENSPREG00000007815	tarbp2	63	71.041	Poecilia_reticulata
ENSDORG00000001390	Tarbp2	100	92.754	ENSPPYG00000004583	TARBP2	90	89.041	Pongo_abelii
ENSDORG00000001390	Tarbp2	93	95.133	ENSPCAG00000005352	TARBP2	62	95.133	Procavia_capensis
ENSDORG00000001390	Tarbp2	100	94.737	ENSPCOG00000013102	TARBP2	86	94.737	Propithecus_coquereli
ENSDORG00000001390	Tarbp2	100	94.667	ENSPVAG00000012286	TARBP2	86	94.667	Pteropus_vampyrus
ENSDORG00000001390	Tarbp2	91	70.136	ENSPNYG00000014125	tarbp2	63	70.136	Pundamilia_nyererei
ENSDORG00000001390	Tarbp2	87	72.038	ENSPNAG00000011128	tarbp2	63	70.588	Pygocentrus_nattereri
ENSDORG00000001390	Tarbp2	100	92.982	ENSRNOG00000042355	Tarbp2	87	92.982	Rattus_norvegicus
ENSDORG00000001390	Tarbp2	100	94.298	ENSRBIG00000027150	TARBP2	86	94.298	Rhinopithecus_bieti
ENSDORG00000001390	Tarbp2	100	94.298	ENSRROG00000044783	TARBP2	86	94.298	Rhinopithecus_roxellana
ENSDORG00000001390	Tarbp2	100	93.860	ENSSBOG00000027305	TARBP2	86	93.860	Saimiri_boliviensis_boliviensis
ENSDORG00000001390	Tarbp2	95	86.638	ENSSHAG00000007064	TARBP2	89	86.638	Sarcophilus_harrisii
ENSDORG00000001390	Tarbp2	94	71.179	ENSSFOG00015010784	tarbp2	63	71.179	Scleropages_formosus
ENSDORG00000001390	Tarbp2	94	67.982	ENSSMAG00000012769	tarbp2	65	66.667	Scophthalmus_maximus
ENSDORG00000001390	Tarbp2	91	70.588	ENSSDUG00000018818	tarbp2	63	70.588	Seriola_dumerili
ENSDORG00000001390	Tarbp2	91	70.588	ENSSLDG00000001835	tarbp2	66	70.136	Seriola_lalandi_dorsalis
ENSDORG00000001390	Tarbp2	83	86.070	ENSSARG00000001010	TARBP2	56	86.070	Sorex_araneus
ENSDORG00000001390	Tarbp2	94	53.648	ENSSPUG00000005895	TARBP2	69	53.648	Sphenodon_punctatus
ENSDORG00000001390	Tarbp2	91	70.588	ENSSPAG00000022797	tarbp2	63	70.588	Stegastes_partitus
ENSDORG00000001390	Tarbp2	100	90.456	ENSSSCG00000000276	TARBP2	95	90.456	Sus_scrofa
ENSDORG00000001390	Tarbp2	91	70.588	ENSTRUG00000014379	tarbp2	63	70.588	Takifugu_rubripes
ENSDORG00000001390	Tarbp2	91	70.588	ENSTNIG00000007065	tarbp2	63	70.588	Tetraodon_nigroviridis
ENSDORG00000001390	Tarbp2	71	95.954	ENSTBEG00000012751	-	55	95.954	Tupaia_belangeri
ENSDORG00000001390	Tarbp2	100	93.363	ENSTTRG00000017177	TARBP2	86	93.363	Tursiops_truncatus
ENSDORG00000001390	Tarbp2	100	93.363	ENSUAMG00000009011	TARBP2	86	93.363	Ursus_americanus
ENSDORG00000001390	Tarbp2	100	93.363	ENSUMAG00000010461	TARBP2	86	93.363	Ursus_maritimus
ENSDORG00000001390	Tarbp2	100	94.248	ENSVVUG00000028150	TARBP2	86	94.248	Vulpes_vulpes
ENSDORG00000001390	Tarbp2	93	72.124	ENSXETG00000012644	tarbp2	63	72.124	Xenopus_tropicalis
ENSDORG00000001390	Tarbp2	91	71.946	ENSXMAG00000017836	tarbp2	63	71.946	Xiphophorus_maculatus