EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000001616 (Gene tree)
Gene ID: 106000446
Gene Symbol: Apex1
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 3517 bases
Position: chrKN672564.1:403752-407268
Accession: 106000446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000001505	Exo_endo_phos	PF03372.23	1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000001610	-	1327	XM_013035702	ENSDORP00000001505	318 (aa)	XP_012891156	A0A1S3GSB0

Gene Model

Click here to download ENSDORG00000001616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000001616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000001616	Apex1	100	94.340	ENSG00000100823	APEX1	100	94.340	Homo_sapiens
ENSDORG00000001616	Apex1	88	69.534	ENSAPOG00000017002	apex1	99	64.873	Acanthochromis_polyacanthus
ENSDORG00000001616	Apex1	100	96.541	ENSAMEG00000005418	APEX1	100	96.541	Ailuropoda_melanoleuca
ENSDORG00000001616	Apex1	87	70.504	ENSACIG00000010653	apex1	97	69.444	Amphilophus_citrinellus
ENSDORG00000001616	Apex1	88	69.176	ENSAOCG00000009649	apex1	93	68.056	Amphiprion_ocellaris
ENSDORG00000001616	Apex1	88	69.176	ENSAPEG00000021453	apex1	93	68.056	Amphiprion_percula
ENSDORG00000001616	Apex1	86	70.545	ENSATEG00000002883	apex1	97	66.456	Anabas_testudineus
ENSDORG00000001616	Apex1	100	69.876	ENSACAG00000008099	APEX1	100	69.876	Anolis_carolinensis
ENSDORG00000001616	Apex1	100	94.654	ENSANAG00000030117	APEX1	100	94.654	Aotus_nancymaae
ENSDORG00000001616	Apex1	87	70.652	ENSACLG00000018441	apex1	99	65.823	Astatotilapia_calliptera
ENSDORG00000001616	Apex1	100	64.688	ENSAMXG00000034699	apex1	100	64.688	Astyanax_mexicanus
ENSDORG00000001616	Apex1	100	95.597	ENSBTAG00000002745	APEX1	100	95.597	Bos_taurus
ENSDORG00000001616	Apex1	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSDORG00000001616	Apex1	100	95.283	ENSCJAG00000009726	APEX1	100	95.283	Callithrix_jacchus
ENSDORG00000001616	Apex1	100	94.025	ENSCAFG00000032033	APEX1	100	94.025	Canis_familiaris
ENSDORG00000001616	Apex1	100	94.025	ENSCAFG00020014377	-	100	94.025	Canis_lupus_dingo
ENSDORG00000001616	Apex1	54	90.116	ENSCAFG00020023002	-	96	90.116	Canis_lupus_dingo
ENSDORG00000001616	Apex1	98	77.244	ENSCHIG00000014537	-	99	77.244	Capra_hircus
ENSDORG00000001616	Apex1	100	94.969	ENSCHIG00000007298	-	100	94.969	Capra_hircus
ENSDORG00000001616	Apex1	100	95.597	ENSTSYG00000034813	APEX1	100	95.597	Carlito_syrichta
ENSDORG00000001616	Apex1	85	88.192	ENSCAPG00000016235	APEX1	91	97.034	Cavia_aperea
ENSDORG00000001616	Apex1	100	94.654	ENSCPOG00000030909	APEX1	100	94.654	Cavia_porcellus
ENSDORG00000001616	Apex1	100	95.283	ENSCCAG00000033056	-	100	95.283	Cebus_capucinus
ENSDORG00000001616	Apex1	100	81.761	ENSCCAG00000031931	-	100	81.761	Cebus_capucinus
ENSDORG00000001616	Apex1	100	94.025	ENSCATG00000015580	APEX1	100	94.025	Cercocebus_atys
ENSDORG00000001616	Apex1	100	94.969	ENSCLAG00000001002	APEX1	100	94.969	Chinchilla_lanigera
ENSDORG00000001616	Apex1	100	93.711	ENSCSAG00000016670	-	100	93.711	Chlorocebus_sabaeus
ENSDORG00000001616	Apex1	100	93.711	ENSCSAG00000016685	-	100	93.711	Chlorocebus_sabaeus
ENSDORG00000001616	Apex1	100	70.533	ENSCPBG00000009567	APEX1	100	70.533	Chrysemys_picta_bellii
ENSDORG00000001616	Apex1	93	53.795	ENSCING00000008137	-	96	53.795	Ciona_intestinalis
ENSDORG00000001616	Apex1	90	47.667	ENSCSAVG00000007144	-	100	52.124	Ciona_savignyi
ENSDORG00000001616	Apex1	100	94.025	ENSCANG00000030726	APEX1	100	94.025	Colobus_angolensis_palliatus
ENSDORG00000001616	Apex1	100	90.252	ENSCGRG00001017046	Apex1	100	90.252	Cricetulus_griseus_chok1gshd
ENSDORG00000001616	Apex1	100	90.252	ENSCGRG00000008984	Apex1	100	90.252	Cricetulus_griseus_crigri
ENSDORG00000001616	Apex1	99	63.924	ENSCSEG00000017499	apex1	99	63.924	Cynoglossus_semilaevis
ENSDORG00000001616	Apex1	88	70.609	ENSCVAG00000022075	apex1	99	66.139	Cyprinodon_variegatus
ENSDORG00000001616	Apex1	100	65.094	ENSDARG00000045843	apex1	100	65.723	Danio_rerio
ENSDORG00000001616	Apex1	100	89.937	ENSDNOG00000042234	APEX1	95	89.937	Dasypus_novemcinctus
ENSDORG00000001616	Apex1	100	94.025	ENSETEG00000004855	-	100	94.025	Echinops_telfairi
ENSDORG00000001616	Apex1	75	64.017	ENSEBUG00000000622	-	92	64.017	Eptatretus_burgeri
ENSDORG00000001616	Apex1	100	96.855	ENSEASG00005017489	APEX1	74	96.855	Equus_asinus_asinus
ENSDORG00000001616	Apex1	100	96.855	ENSECAG00000022325	APEX1	82	96.855	Equus_caballus
ENSDORG00000001616	Apex1	91	93.403	ENSEEUG00000012569	APEX1	100	93.403	Erinaceus_europaeus
ENSDORG00000001616	Apex1	100	65.094	ENSELUG00000021706	apex1	100	66.038	Esox_lucius
ENSDORG00000001616	Apex1	100	96.541	ENSFCAG00000030869	APEX1	100	96.541	Felis_catus
ENSDORG00000001616	Apex1	100	94.025	ENSFDAG00000006120	APEX1	100	94.025	Fukomys_damarensis
ENSDORG00000001616	Apex1	99	66.772	ENSFHEG00000009031	apex1	83	66.772	Fundulus_heteroclitus
ENSDORG00000001616	Apex1	99	61.076	ENSGMOG00000007943	apex1	99	61.076	Gadus_morhua
ENSDORG00000001616	Apex1	88	71.685	ENSGAFG00000005311	apex1	99	66.456	Gambusia_affinis
ENSDORG00000001616	Apex1	99	64.557	ENSGACG00000019497	apex1	99	68.797	Gasterosteus_aculeatus
ENSDORG00000001616	Apex1	100	70.219	ENSGAGG00000014999	APEX1	100	70.219	Gopherus_agassizii
ENSDORG00000001616	Apex1	100	94.654	ENSGGOG00000002128	APEX1	100	94.654	Gorilla_gorilla
ENSDORG00000001616	Apex1	87	70.290	ENSHBUG00000005894	apex1	99	65.190	Haplochromis_burtoni
ENSDORG00000001616	Apex1	100	95.283	ENSHGLG00000002848	APEX1	100	95.283	Heterocephalus_glaber_female
ENSDORG00000001616	Apex1	100	95.283	ENSHGLG00100017878	APEX1	100	95.283	Heterocephalus_glaber_male
ENSDORG00000001616	Apex1	99	65.615	ENSHCOG00000009961	apex1	99	65.615	Hippocampus_comes
ENSDORG00000001616	Apex1	100	67.398	ENSIPUG00000005799	apex1	100	67.398	Ictalurus_punctatus
ENSDORG00000001616	Apex1	100	94.340	ENSSTOG00000010096	APEX1	100	94.340	Ictidomys_tridecemlineatus
ENSDORG00000001616	Apex1	100	84.906	ENSJJAG00000003660	-	100	84.906	Jaculus_jaculus
ENSDORG00000001616	Apex1	100	81.447	ENSJJAG00000020465	-	100	81.447	Jaculus_jaculus
ENSDORG00000001616	Apex1	100	94.654	ENSJJAG00000012067	-	100	94.654	Jaculus_jaculus
ENSDORG00000001616	Apex1	88	70.968	ENSKMAG00000021171	apex1	99	66.139	Kryptolebias_marmoratus
ENSDORG00000001616	Apex1	88	67.742	ENSLBEG00000010248	apex1	99	63.722	Labrus_bergylta
ENSDORG00000001616	Apex1	100	66.875	ENSLACG00000008617	APEX1	100	66.875	Latimeria_chalumnae
ENSDORG00000001616	Apex1	100	65.528	ENSLOCG00000015516	apex1	99	65.528	Lepisosteus_oculatus
ENSDORG00000001616	Apex1	100	92.453	ENSLAFG00000021872	APEX1	100	92.453	Loxodonta_africana
ENSDORG00000001616	Apex1	100	94.025	ENSMFAG00000002565	APEX1	100	94.025	Macaca_fascicularis
ENSDORG00000001616	Apex1	100	94.025	ENSMMUG00000048039	APEX1	100	94.025	Macaca_mulatta
ENSDORG00000001616	Apex1	100	94.025	ENSMNEG00000036944	APEX1	100	94.025	Macaca_nemestrina
ENSDORG00000001616	Apex1	100	94.025	ENSMLEG00000042125	APEX1	100	94.025	Mandrillus_leucophaeus
ENSDORG00000001616	Apex1	88	70.968	ENSMAMG00000023526	apex1	99	66.139	Mastacembelus_armatus
ENSDORG00000001616	Apex1	87	70.652	ENSMZEG00005014187	apex1	99	65.823	Maylandia_zebra
ENSDORG00000001616	Apex1	100	91.195	ENSMAUG00000013994	Apex1	100	91.195	Mesocricetus_auratus
ENSDORG00000001616	Apex1	100	95.912	ENSMICG00000043554	APEX1	100	95.912	Microcebus_murinus
ENSDORG00000001616	Apex1	100	92.767	ENSMOCG00000013721	Apex1	100	92.767	Microtus_ochrogaster
ENSDORG00000001616	Apex1	88	66.786	ENSMMOG00000010031	apex1	97	62.145	Mola_mola
ENSDORG00000001616	Apex1	100	84.062	ENSMODG00000007125	APEX1	100	86.025	Monodelphis_domestica
ENSDORG00000001616	Apex1	88	63.799	ENSMALG00000011699	apex1	79	61.775	Monopterus_albus
ENSDORG00000001616	Apex1	99	93.375	MGP_CAROLIEiJ_G0019209	Apex1	99	93.375	Mus_caroli
ENSDORG00000001616	Apex1	100	93.711	ENSMUSG00000035960	Apex1	100	93.711	Mus_musculus
ENSDORG00000001616	Apex1	100	93.082	MGP_PahariEiJ_G0030232	Apex1	100	93.082	Mus_pahari
ENSDORG00000001616	Apex1	100	93.711	MGP_SPRETEiJ_G0020101	Apex1	100	93.711	Mus_spretus
ENSDORG00000001616	Apex1	100	94.688	ENSMLUG00000028957	APEX1	100	94.688	Myotis_lucifugus
ENSDORG00000001616	Apex1	100	93.082	ENSNGAG00000002725	-	100	93.082	Nannospalax_galili
ENSDORG00000001616	Apex1	100	69.497	ENSNGAG00000021748	-	99	69.497	Nannospalax_galili
ENSDORG00000001616	Apex1	87	70.290	ENSNBRG00000005334	apex1	91	65.506	Neolamprologus_brichardi
ENSDORG00000001616	Apex1	100	94.340	ENSNLEG00000010839	APEX1	100	94.340	Nomascus_leucogenys
ENSDORG00000001616	Apex1	100	86.478	ENSMEUG00000014519	APEX1	100	86.478	Notamacropus_eugenii
ENSDORG00000001616	Apex1	100	94.654	ENSOPRG00000014029	APEX1	100	94.654	Ochotona_princeps
ENSDORG00000001616	Apex1	100	96.226	ENSODEG00000001703	-	100	96.226	Octodon_degus
ENSDORG00000001616	Apex1	100	72.840	ENSODEG00000006583	-	100	72.840	Octodon_degus
ENSDORG00000001616	Apex1	97	76.699	ENSODEG00000004777	-	99	76.699	Octodon_degus
ENSDORG00000001616	Apex1	87	70.863	ENSONIG00000012089	apex1	99	66.139	Oreochromis_niloticus
ENSDORG00000001616	Apex1	90	82.807	ENSOANG00000008836	APEX1	80	79.012	Ornithorhynchus_anatinus
ENSDORG00000001616	Apex1	100	94.969	ENSOCUG00000005022	APEX1	100	94.969	Oryctolagus_cuniculus
ENSDORG00000001616	Apex1	99	66.667	ENSORLG00000012378	apex1	99	66.667	Oryzias_latipes
ENSDORG00000001616	Apex1	99	66.667	ENSORLG00020021371	apex1	99	66.667	Oryzias_latipes_hni
ENSDORG00000001616	Apex1	99	66.667	ENSORLG00015020089	apex1	99	66.667	Oryzias_latipes_hsok
ENSDORG00000001616	Apex1	99	66.038	ENSOMEG00000018876	apex1	99	66.352	Oryzias_melastigma
ENSDORG00000001616	Apex1	100	94.969	ENSOGAG00000013335	-	100	94.969	Otolemur_garnettii
ENSDORG00000001616	Apex1	98	84.615	ENSOGAG00000029355	-	100	84.615	Otolemur_garnettii
ENSDORG00000001616	Apex1	99	81.329	ENSOARG00000014424	-	100	81.329	Ovis_aries
ENSDORG00000001616	Apex1	97	91.234	ENSOARG00000001876	-	100	91.234	Ovis_aries
ENSDORG00000001616	Apex1	100	94.025	ENSOARG00000019740	-	100	94.025	Ovis_aries
ENSDORG00000001616	Apex1	100	94.654	ENSPPAG00000038760	APEX1	100	94.654	Pan_paniscus
ENSDORG00000001616	Apex1	100	96.226	ENSPPRG00000011794	APEX1	100	96.226	Panthera_pardus
ENSDORG00000001616	Apex1	100	96.541	ENSPTIG00000014829	APEX1	100	96.541	Panthera_tigris_altaica
ENSDORG00000001616	Apex1	100	94.654	ENSPTRG00000006093	APEX1	100	94.654	Pan_troglodytes
ENSDORG00000001616	Apex1	100	94.025	ENSPANG00000022757	APEX1	100	94.025	Papio_anubis
ENSDORG00000001616	Apex1	87	69.314	ENSPKIG00000003504	apex1	100	64.907	Paramormyrops_kingsleyae
ENSDORG00000001616	Apex1	76	66.667	ENSPMGG00000016596	apex1	73	66.667	Periophthalmus_magnuspinnatus
ENSDORG00000001616	Apex1	100	93.082	ENSPEMG00000019097	Apex1	100	93.082	Peromyscus_maniculatus_bairdii
ENSDORG00000001616	Apex1	94	65.000	ENSPMAG00000007275	-	99	65.000	Petromyzon_marinus
ENSDORG00000001616	Apex1	100	84.013	ENSPCIG00000023274	APEX1	100	86.604	Phascolarctos_cinereus
ENSDORG00000001616	Apex1	88	72.043	ENSPFOG00000004178	apex1	99	67.508	Poecilia_formosa
ENSDORG00000001616	Apex1	88	71.685	ENSPLAG00000012779	apex1	99	67.192	Poecilia_latipinna
ENSDORG00000001616	Apex1	88	72.043	ENSPMEG00000019623	apex1	99	67.508	Poecilia_mexicana
ENSDORG00000001616	Apex1	88	71.685	ENSPREG00000014298	apex1	99	67.192	Poecilia_reticulata
ENSDORG00000001616	Apex1	100	94.340	ENSPPYG00000005565	APEX1	100	94.340	Pongo_abelii
ENSDORG00000001616	Apex1	100	90.566	ENSPCAG00000010376	APEX1	100	90.566	Procavia_capensis
ENSDORG00000001616	Apex1	100	95.912	ENSPCOG00000021564	APEX1	100	95.912	Propithecus_coquereli
ENSDORG00000001616	Apex1	100	95.000	ENSPVAG00000010736	APEX1	100	95.000	Pteropus_vampyrus
ENSDORG00000001616	Apex1	87	70.652	ENSPNYG00000023940	apex1	99	65.823	Pundamilia_nyererei
ENSDORG00000001616	Apex1	93	65.203	ENSPNAG00000020897	apex1	96	65.085	Pygocentrus_nattereri
ENSDORG00000001616	Apex1	100	92.767	ENSRNOG00000009663	Apex1	100	92.767	Rattus_norvegicus
ENSDORG00000001616	Apex1	100	94.340	ENSRBIG00000038325	APEX1	99	94.340	Rhinopithecus_bieti
ENSDORG00000001616	Apex1	100	94.969	ENSSBOG00000018921	-	100	94.969	Saimiri_boliviensis_boliviensis
ENSDORG00000001616	Apex1	100	80.503	ENSSBOG00000031372	-	100	80.503	Saimiri_boliviensis_boliviensis
ENSDORG00000001616	Apex1	100	83.025	ENSSHAG00000013524	APEX1	100	84.356	Sarcophilus_harrisii
ENSDORG00000001616	Apex1	87	66.065	ENSSFOG00015001948	apex1	100	61.950	Scleropages_formosus
ENSDORG00000001616	Apex1	87	68.705	ENSSMAG00000013348	apex1	99	64.557	Scophthalmus_maximus
ENSDORG00000001616	Apex1	99	65.190	ENSSDUG00000016377	apex1	99	65.190	Seriola_dumerili
ENSDORG00000001616	Apex1	99	65.190	ENSSLDG00000023005	apex1	99	65.190	Seriola_lalandi_dorsalis
ENSDORG00000001616	Apex1	92	70.408	ENSSPUG00000000531	APEX1	99	70.408	Sphenodon_punctatus
ENSDORG00000001616	Apex1	99	65.190	ENSSPAG00000000458	apex1	99	65.190	Stegastes_partitus
ENSDORG00000001616	Apex1	100	95.283	ENSSSCG00000040060	-	100	95.283	Sus_scrofa
ENSDORG00000001616	Apex1	100	55.556	ENSSSCG00000039705	-	100	55.556	Sus_scrofa
ENSDORG00000001616	Apex1	74	58.898	ENSTGUG00000014378	APEX1	100	58.898	Taeniopygia_guttata
ENSDORG00000001616	Apex1	87	66.906	ENSTRUG00000004268	apex1	95	62.342	Takifugu_rubripes
ENSDORG00000001616	Apex1	99	63.291	ENSTNIG00000005778	apex1	99	63.291	Tetraodon_nigroviridis
ENSDORG00000001616	Apex1	100	91.195	ENSTBEG00000006405	APEX1	100	91.195	Tupaia_belangeri
ENSDORG00000001616	Apex1	74	95.339	ENSTTRG00000007860	APEX1	100	95.339	Tursiops_truncatus
ENSDORG00000001616	Apex1	100	96.855	ENSUAMG00000010457	APEX1	100	96.855	Ursus_americanus
ENSDORG00000001616	Apex1	100	96.855	ENSUMAG00000009178	APEX1	100	96.855	Ursus_maritimus
ENSDORG00000001616	Apex1	74	90.254	ENSVPAG00000005083	APEX1	100	90.254	Vicugna_pacos
ENSDORG00000001616	Apex1	100	93.711	ENSVVUG00000009010	APEX1	100	93.711	Vulpes_vulpes
ENSDORG00000001616	Apex1	100	66.355	ENSXETG00000024773	apex1	100	66.355	Xenopus_tropicalis
ENSDORG00000001616	Apex1	93	67.101	ENSXCOG00000015233	apex1	99	66.772	Xiphophorus_couchianus
ENSDORG00000001616	Apex1	93	67.427	ENSXMAG00000006195	apex1	99	66.772	Xiphophorus_maculatus