EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000001708 (Gene tree)
Gene ID: -
Gene Symbol: Cnot6
Alias: A230103N10Rik
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 22053 bases
Position: chrKN672481.1:1967193-1989245
Accession: 105996785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000018187	Exo_endo_phos	PF03372.23	6.3e-18	1	1
ENSDORP00000001597	Exo_endo_phos	PF03372.23	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000027278	-	1599	XM_013030982	ENSDORP00000018187	532 (aa)	XP_012886436	UPI000BAD211C
ENSDORT00000001708	-	1596	-	ENSDORP00000001597	531 (aa)	-	UPI000BAD176A

Gene Model

Click here to download ENSDORG00000001708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000001708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000001708	Cnot6	100	62.007	ENSDORG00000011458	Cnot6l	100	62.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000001708	Cnot6	100	86.535	ENSG00000113300	CNOT6	100	100.000	Homo_sapiens
ENSDORG00000001708	Cnot6	100	77.639	ENSAPOG00000009994	cnot6b	100	77.639	Acanthochromis_polyacanthus
ENSDORG00000001708	Cnot6	100	86.583	ENSAMEG00000000949	CNOT6	99	86.583	Ailuropoda_melanoleuca
ENSDORG00000001708	Cnot6	100	77.102	ENSACIG00000016566	cnot6b	100	77.102	Amphilophus_citrinellus
ENSDORG00000001708	Cnot6	100	77.639	ENSAOCG00000006893	cnot6b	100	77.639	Amphiprion_ocellaris
ENSDORG00000001708	Cnot6	100	77.639	ENSAPEG00000016949	cnot6b	100	77.639	Amphiprion_percula
ENSDORG00000001708	Cnot6	100	76.386	ENSATEG00000007862	cnot6b	100	76.386	Anabas_testudineus
ENSDORG00000001708	Cnot6	100	84.919	ENSAPLG00000012715	CNOT6	99	84.919	Anas_platyrhynchos
ENSDORG00000001708	Cnot6	100	82.406	ENSACAG00000016548	CNOT6	100	82.406	Anolis_carolinensis
ENSDORG00000001708	Cnot6	100	86.894	ENSANAG00000030436	CNOT6	96	86.894	Aotus_nancymaae
ENSDORG00000001708	Cnot6	100	76.565	ENSACLG00000008279	cnot6b	100	77.460	Astatotilapia_calliptera
ENSDORG00000001708	Cnot6	100	77.419	ENSAMXG00000034694	cnot6b	100	77.419	Astyanax_mexicanus
ENSDORG00000001708	Cnot6	100	77.957	ENSAMXG00000019140	cnot6a	100	77.957	Astyanax_mexicanus
ENSDORG00000001708	Cnot6	100	86.535	ENSBTAG00000017362	CNOT6	100	86.535	Bos_taurus
ENSDORG00000001708	Cnot6	100	86.715	ENSCJAG00000009795	CNOT6	100	86.715	Callithrix_jacchus
ENSDORG00000001708	Cnot6	100	86.894	ENSCAFG00000000464	CNOT6	100	86.894	Canis_familiaris
ENSDORG00000001708	Cnot6	100	86.894	ENSCAFG00020002441	CNOT6	100	86.894	Canis_lupus_dingo
ENSDORG00000001708	Cnot6	100	86.535	ENSCHIG00000019100	CNOT6	100	86.535	Capra_hircus
ENSDORG00000001708	Cnot6	100	85.458	ENSTSYG00000003982	CNOT6	100	85.458	Carlito_syrichta
ENSDORG00000001708	Cnot6	100	82.975	ENSCPOG00000035657	CNOT6	100	82.975	Cavia_porcellus
ENSDORG00000001708	Cnot6	100	82.944	ENSCCAG00000033670	CNOT6	100	82.944	Cebus_capucinus
ENSDORG00000001708	Cnot6	100	86.535	ENSCATG00000042014	CNOT6	100	86.535	Cercocebus_atys
ENSDORG00000001708	Cnot6	100	86.894	ENSCLAG00000010489	CNOT6	100	86.894	Chinchilla_lanigera
ENSDORG00000001708	Cnot6	100	86.535	ENSCSAG00000008165	CNOT6	100	86.535	Chlorocebus_sabaeus
ENSDORG00000001708	Cnot6	100	85.099	ENSCHOG00000009680	CNOT6	100	85.099	Choloepus_hoffmanni
ENSDORG00000001708	Cnot6	100	84.201	ENSCPBG00000008908	CNOT6	100	84.201	Chrysemys_picta_bellii
ENSDORG00000001708	Cnot6	100	86.715	ENSCANG00000026756	CNOT6	100	86.715	Colobus_angolensis_palliatus
ENSDORG00000001708	Cnot6	100	86.022	ENSCGRG00001011452	Cnot6	100	86.022	Cricetulus_griseus_chok1gshd
ENSDORG00000001708	Cnot6	100	84.409	ENSCGRG00000010407	Cnot6	100	84.409	Cricetulus_griseus_crigri
ENSDORG00000001708	Cnot6	100	77.281	ENSCSEG00000010939	cnot6b	100	77.281	Cynoglossus_semilaevis
ENSDORG00000001708	Cnot6	100	76.882	ENSCVAG00000010538	cnot6b	100	76.882	Cyprinodon_variegatus
ENSDORG00000001708	Cnot6	100	75.269	ENSDARG00000101072	cnot6b	100	75.269	Danio_rerio
ENSDORG00000001708	Cnot6	100	77.957	ENSDARG00000008255	cnot6a	100	77.957	Danio_rerio
ENSDORG00000001708	Cnot6	100	86.535	ENSDNOG00000041644	CNOT6	100	86.535	Dasypus_novemcinctus
ENSDORG00000001708	Cnot6	100	67.442	ENSETEG00000006975	CNOT6	100	67.442	Echinops_telfairi
ENSDORG00000001708	Cnot6	89	80.240	ENSEASG00005012957	-	99	80.240	Equus_asinus_asinus
ENSDORG00000001708	Cnot6	100	85.996	ENSEASG00005012794	-	100	85.996	Equus_asinus_asinus
ENSDORG00000001708	Cnot6	100	86.715	ENSECAG00000019325	CNOT6	100	86.715	Equus_caballus
ENSDORG00000001708	Cnot6	100	80.431	ENSECAG00000012704	-	99	80.431	Equus_caballus
ENSDORG00000001708	Cnot6	100	85.817	ENSEEUG00000015382	CNOT6	100	85.817	Erinaceus_europaeus
ENSDORG00000001708	Cnot6	100	75.571	ENSELUG00000015981	cnot6b	99	75.571	Esox_lucius
ENSDORG00000001708	Cnot6	100	74.552	ENSELUG00000024580	cnot6a	100	74.552	Esox_lucius
ENSDORG00000001708	Cnot6	100	86.894	ENSFCAG00000001881	CNOT6	100	86.894	Felis_catus
ENSDORG00000001708	Cnot6	100	85.099	ENSFALG00000007699	CNOT6	100	85.099	Ficedula_albicollis
ENSDORG00000001708	Cnot6	100	87.097	ENSFDAG00000001999	CNOT6	100	87.097	Fukomys_damarensis
ENSDORG00000001708	Cnot6	63	88.095	ENSFHEG00000013756	cnot6b	94	94.737	Fundulus_heteroclitus
ENSDORG00000001708	Cnot6	95	75.425	ENSGMOG00000009767	cnot6b	99	75.425	Gadus_morhua
ENSDORG00000001708	Cnot6	100	85.099	ENSGALG00000034316	CNOT6	100	85.099	Gallus_gallus
ENSDORG00000001708	Cnot6	100	76.882	ENSGAFG00000008525	cnot6b	100	76.882	Gambusia_affinis
ENSDORG00000001708	Cnot6	95	75.376	ENSGACG00000018046	cnot6b	99	75.376	Gasterosteus_aculeatus
ENSDORG00000001708	Cnot6	100	68.402	ENSGAGG00000012176	CNOT6	100	68.402	Gopherus_agassizii
ENSDORG00000001708	Cnot6	100	86.535	ENSGGOG00000003675	CNOT6	100	86.535	Gorilla_gorilla
ENSDORG00000001708	Cnot6	100	76.565	ENSHBUG00000002819	cnot6b	100	77.460	Haplochromis_burtoni
ENSDORG00000001708	Cnot6	100	86.738	ENSHGLG00000017756	CNOT6	100	86.738	Heterocephalus_glaber_female
ENSDORG00000001708	Cnot6	100	86.738	ENSHGLG00100005747	CNOT6	100	86.738	Heterocephalus_glaber_male
ENSDORG00000001708	Cnot6	100	75.134	ENSHCOG00000016176	cnot6b	100	76.029	Hippocampus_comes
ENSDORG00000001708	Cnot6	100	77.061	ENSIPUG00000019831	cnot6a	100	77.061	Ictalurus_punctatus
ENSDORG00000001708	Cnot6	100	76.703	ENSIPUG00000017482	cnot6b	100	76.703	Ictalurus_punctatus
ENSDORG00000001708	Cnot6	100	86.918	ENSSTOG00000002803	CNOT6	100	86.918	Ictidomys_tridecemlineatus
ENSDORG00000001708	Cnot6	100	85.305	ENSJJAG00000012296	Cnot6	100	85.305	Jaculus_jaculus
ENSDORG00000001708	Cnot6	100	77.419	ENSKMAG00000004640	cnot6b	100	77.419	Kryptolebias_marmoratus
ENSDORG00000001708	Cnot6	100	76.029	ENSLBEG00000027917	cnot6b	100	76.923	Labrus_bergylta
ENSDORG00000001708	Cnot6	100	80.645	ENSLOCG00000010102	cnot6b	99	81.038	Lepisosteus_oculatus
ENSDORG00000001708	Cnot6	100	87.074	ENSLAFG00000016742	CNOT6	100	87.074	Loxodonta_africana
ENSDORG00000001708	Cnot6	100	86.535	ENSMFAG00000030867	CNOT6	100	86.535	Macaca_fascicularis
ENSDORG00000001708	Cnot6	100	86.535	ENSMMUG00000018690	CNOT6	100	86.535	Macaca_mulatta
ENSDORG00000001708	Cnot6	100	86.535	ENSMNEG00000038565	CNOT6	100	86.535	Macaca_nemestrina
ENSDORG00000001708	Cnot6	100	86.535	ENSMLEG00000010555	CNOT6	100	86.535	Mandrillus_leucophaeus
ENSDORG00000001708	Cnot6	100	77.818	ENSMAMG00000007515	cnot6b	100	77.818	Mastacembelus_armatus
ENSDORG00000001708	Cnot6	100	76.565	ENSMZEG00005012899	cnot6b	100	77.460	Maylandia_zebra
ENSDORG00000001708	Cnot6	100	87.097	ENSMAUG00000019798	Cnot6	100	87.097	Mesocricetus_auratus
ENSDORG00000001708	Cnot6	100	85.099	ENSMICG00000013018	-	100	85.099	Microcebus_murinus
ENSDORG00000001708	Cnot6	98	86.127	ENSMICG00000028378	-	99	86.127	Microcebus_murinus
ENSDORG00000001708	Cnot6	100	87.097	ENSMOCG00000021662	Cnot6	100	87.097	Microtus_ochrogaster
ENSDORG00000001708	Cnot6	100	75.627	ENSMMOG00000003227	cnot6b	100	75.627	Mola_mola
ENSDORG00000001708	Cnot6	100	85.099	ENSMODG00000003979	CNOT6	100	85.099	Monodelphis_domestica
ENSDORG00000001708	Cnot6	100	77.996	ENSMALG00000014251	cnot6b	100	77.996	Monopterus_albus
ENSDORG00000001708	Cnot6	100	87.276	MGP_CAROLIEiJ_G0016277	Cnot6	100	87.276	Mus_caroli
ENSDORG00000001708	Cnot6	100	87.276	ENSMUSG00000020362	Cnot6	100	87.276	Mus_musculus
ENSDORG00000001708	Cnot6	100	87.276	MGP_PahariEiJ_G0017413	Cnot6	100	87.276	Mus_pahari
ENSDORG00000001708	Cnot6	100	86.918	MGP_SPRETEiJ_G0017122	Cnot6	100	86.918	Mus_spretus
ENSDORG00000001708	Cnot6	100	86.715	ENSMPUG00000000587	CNOT6	96	86.715	Mustela_putorius_furo
ENSDORG00000001708	Cnot6	100	84.698	ENSMLUG00000010257	CNOT6	100	84.698	Myotis_lucifugus
ENSDORG00000001708	Cnot6	100	86.022	ENSNGAG00000008269	Cnot6	100	86.022	Nannospalax_galili
ENSDORG00000001708	Cnot6	100	76.565	ENSNBRG00000010798	cnot6b	100	77.460	Neolamprologus_brichardi
ENSDORG00000001708	Cnot6	100	85.099	ENSNLEG00000002322	CNOT6	100	85.099	Nomascus_leucogenys
ENSDORG00000001708	Cnot6	80	81.172	ENSMEUG00000000025	CNOT6	81	81.172	Notamacropus_eugenii
ENSDORG00000001708	Cnot6	92	94.988	ENSOPRG00000008244	-	88	94.988	Ochotona_princeps
ENSDORG00000001708	Cnot6	100	85.663	ENSODEG00000007041	CNOT6	100	85.663	Octodon_degus
ENSDORG00000001708	Cnot6	79	85.377	ENSONIG00000013027	cnot6b	99	85.377	Oreochromis_niloticus
ENSDORG00000001708	Cnot6	100	83.842	ENSOANG00000010226	CNOT6	100	83.842	Ornithorhynchus_anatinus
ENSDORG00000001708	Cnot6	100	85.510	ENSOCUG00000011083	CNOT6	100	85.510	Oryctolagus_cuniculus
ENSDORG00000001708	Cnot6	100	77.281	ENSORLG00000005059	cnot6b	100	77.281	Oryzias_latipes
ENSDORG00000001708	Cnot6	100	77.281	ENSORLG00020012784	cnot6b	100	77.281	Oryzias_latipes_hni
ENSDORG00000001708	Cnot6	93	75.908	ENSORLG00015022658	cnot6b	98	75.908	Oryzias_latipes_hsok
ENSDORG00000001708	Cnot6	100	77.460	ENSOMEG00000005295	cnot6b	100	77.460	Oryzias_melastigma
ENSDORG00000001708	Cnot6	93	85.496	ENSOGAG00000032470	CNOT6	100	85.496	Otolemur_garnettii
ENSDORG00000001708	Cnot6	97	85.793	ENSOARG00000001003	CNOT6	100	85.793	Ovis_aries
ENSDORG00000001708	Cnot6	100	86.535	ENSPPAG00000032253	CNOT6	100	86.535	Pan_paniscus
ENSDORG00000001708	Cnot6	100	86.715	ENSPPRG00000011912	CNOT6	100	86.715	Panthera_pardus
ENSDORG00000001708	Cnot6	100	86.715	ENSPTIG00000016794	CNOT6	100	86.715	Panthera_tigris_altaica
ENSDORG00000001708	Cnot6	100	86.535	ENSPTRG00000017636	CNOT6	100	86.535	Pan_troglodytes
ENSDORG00000001708	Cnot6	100	86.535	ENSPANG00000016191	CNOT6	100	86.535	Papio_anubis
ENSDORG00000001708	Cnot6	100	78.136	ENSPKIG00000021368	cnot6b	100	78.136	Paramormyrops_kingsleyae
ENSDORG00000001708	Cnot6	98	84.375	ENSPSIG00000017307	CNOT6	100	84.375	Pelodiscus_sinensis
ENSDORG00000001708	Cnot6	100	77.102	ENSPMGG00000011238	cnot6b	100	77.102	Periophthalmus_magnuspinnatus
ENSDORG00000001708	Cnot6	100	86.380	ENSPEMG00000000627	Cnot6	100	86.380	Peromyscus_maniculatus_bairdii
ENSDORG00000001708	Cnot6	100	84.919	ENSPCIG00000020319	CNOT6	99	84.919	Phascolarctos_cinereus
ENSDORG00000001708	Cnot6	100	77.240	ENSPFOG00000006291	cnot6b	100	77.240	Poecilia_formosa
ENSDORG00000001708	Cnot6	100	73.477	ENSPLAG00000008266	cnot6b	100	73.477	Poecilia_latipinna
ENSDORG00000001708	Cnot6	100	77.240	ENSPMEG00000009091	cnot6b	100	77.240	Poecilia_mexicana
ENSDORG00000001708	Cnot6	100	75.627	ENSPREG00000003713	cnot6b	100	75.627	Poecilia_reticulata
ENSDORG00000001708	Cnot6	100	86.535	ENSPPYG00000016137	CNOT6	100	86.535	Pongo_abelii
ENSDORG00000001708	Cnot6	69	75.940	ENSPCAG00000005599	-	59	100.000	Procavia_capensis
ENSDORG00000001708	Cnot6	100	82.226	ENSPCOG00000017359	CNOT6	100	82.944	Propithecus_coquereli
ENSDORG00000001708	Cnot6	100	81.867	ENSPVAG00000003069	CNOT6	100	81.867	Pteropus_vampyrus
ENSDORG00000001708	Cnot6	100	76.386	ENSPNYG00000000321	cnot6b	100	77.281	Pundamilia_nyererei
ENSDORG00000001708	Cnot6	100	77.240	ENSPNAG00000028816	cnot6b	100	77.240	Pygocentrus_nattereri
ENSDORG00000001708	Cnot6	100	78.136	ENSPNAG00000029586	cnot6a	100	78.136	Pygocentrus_nattereri
ENSDORG00000001708	Cnot6	100	86.201	ENSRNOG00000054891	Cnot6	100	86.201	Rattus_norvegicus
ENSDORG00000001708	Cnot6	100	86.355	ENSRBIG00000004309	CNOT6	100	86.355	Rhinopithecus_bieti
ENSDORG00000001708	Cnot6	100	86.355	ENSRROG00000035378	CNOT6	100	86.355	Rhinopithecus_roxellana
ENSDORG00000001708	Cnot6	100	86.715	ENSSBOG00000030494	CNOT6	100	86.715	Saimiri_boliviensis_boliviensis
ENSDORG00000001708	Cnot6	100	84.919	ENSSHAG00000017436	CNOT6	100	84.919	Sarcophilus_harrisii
ENSDORG00000001708	Cnot6	100	77.778	ENSSFOG00015022383	cnot6a	96	77.778	Scleropages_formosus
ENSDORG00000001708	Cnot6	100	79.928	ENSSFOG00015015133	CNOT6	100	79.928	Scleropages_formosus
ENSDORG00000001708	Cnot6	100	76.029	ENSSMAG00000003084	cnot6b	100	76.029	Scophthalmus_maximus
ENSDORG00000001708	Cnot6	100	77.639	ENSSDUG00000004151	cnot6b	100	77.639	Seriola_dumerili
ENSDORG00000001708	Cnot6	100	76.923	ENSSLDG00000004448	cnot6b	100	77.818	Seriola_lalandi_dorsalis
ENSDORG00000001708	Cnot6	56	72.483	ENSSARG00000012650	-	84	72.000	Sorex_araneus
ENSDORG00000001708	Cnot6	100	84.022	ENSSPUG00000007893	CNOT6	100	84.022	Sphenodon_punctatus
ENSDORG00000001708	Cnot6	100	77.818	ENSSPAG00000000149	cnot6b	100	77.818	Stegastes_partitus
ENSDORG00000001708	Cnot6	100	86.355	ENSSSCG00000014009	CNOT6	100	86.355	Sus_scrofa
ENSDORG00000001708	Cnot6	100	84.740	ENSTGUG00000001119	CNOT6	100	84.740	Taeniopygia_guttata
ENSDORG00000001708	Cnot6	100	75.763	ENSTRUG00000002818	cnot6b	100	75.763	Takifugu_rubripes
ENSDORG00000001708	Cnot6	100	76.122	ENSTNIG00000004443	cnot6b	99	76.122	Tetraodon_nigroviridis
ENSDORG00000001708	Cnot6	67	73.464	ENSTBEG00000017094	-	74	73.464	Tupaia_belangeri
ENSDORG00000001708	Cnot6	100	86.535	ENSTTRG00000009363	CNOT6	100	86.535	Tursiops_truncatus
ENSDORG00000001708	Cnot6	76	84.615	ENSUAMG00000004579	CNOT6	88	84.615	Ursus_americanus
ENSDORG00000001708	Cnot6	100	82.705	ENSUMAG00000024577	CNOT6	100	82.705	Ursus_maritimus
ENSDORG00000001708	Cnot6	83	94.595	ENSVPAG00000003593	CNOT6	83	94.595	Vicugna_pacos
ENSDORG00000001708	Cnot6	100	86.894	ENSVVUG00000026940	CNOT6	100	86.894	Vulpes_vulpes
ENSDORG00000001708	Cnot6	100	73.477	ENSXCOG00000003360	cnot6b	100	73.477	Xiphophorus_couchianus
ENSDORG00000001708	Cnot6	100	76.882	ENSXMAG00000008730	cnot6b	100	76.882	Xiphophorus_maculatus