EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000001819 (Gene tree)
Gene ID: 105980849
Gene Symbol: Pus3
Alias: 2610020J05Rik|5730412F04Rik
Full Name: pseudouridine synthase 3
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 9500 bases
Position: chrKN672356.1:10258872-10268371
Accession: 105980849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000001698	PseudoU_synth_1	PF01416.20	1.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000001813	-	1924	XM_013009809	ENSDORP00000001698	481 (aa)	XP_012865263	UPI000BAD1069

Gene Model

Click here to download ENSDORG00000001819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000001819's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000001819	Pus3	99	85.000	ENSG00000110060	PUS3	100	84.762	Homo_sapiens
ENSDORG00000001819	Pus3	89	52.791	ENSAPOG00000019483	pus3	93	52.900	Acanthochromis_polyacanthus
ENSDORG00000001819	Pus3	100	85.031	ENSAMEG00000000144	PUS3	100	85.031	Ailuropoda_melanoleuca
ENSDORG00000001819	Pus3	69	60.000	ENSACIG00000024479	pus3	99	57.278	Amphilophus_citrinellus
ENSDORG00000001819	Pus3	88	51.106	ENSAOCG00000006589	pus3	91	51.214	Amphiprion_ocellaris
ENSDORG00000001819	Pus3	88	50.889	ENSAPEG00000014617	pus3	91	50.998	Amphiprion_percula
ENSDORG00000001819	Pus3	88	52.262	ENSATEG00000022731	pus3	90	52.370	Anabas_testudineus
ENSDORG00000001819	Pus3	89	70.481	ENSAPLG00000013285	PUS3	98	70.481	Anas_platyrhynchos
ENSDORG00000001819	Pus3	94	67.834	ENSACAG00000000186	PUS3	99	67.834	Anolis_carolinensis
ENSDORG00000001819	Pus3	99	83.542	ENSANAG00000035614	PUS3	99	83.542	Aotus_nancymaae
ENSDORG00000001819	Pus3	88	50.893	ENSACLG00000007356	pus3	91	51.002	Astatotilapia_calliptera
ENSDORG00000001819	Pus3	88	52.018	ENSAMXG00000019534	pus3	93	51.193	Astyanax_mexicanus
ENSDORG00000001819	Pus3	99	85.031	ENSBTAG00000014339	PUS3	99	85.031	Bos_taurus
ENSDORG00000001819	Pus3	68	37.685	WBGene00006473	tag-124	82	37.982	Caenorhabditis_elegans
ENSDORG00000001819	Pus3	99	83.750	ENSCJAG00000046645	PUS3	99	83.750	Callithrix_jacchus
ENSDORG00000001819	Pus3	100	84.615	ENSCAFG00000010534	PUS3	100	84.615	Canis_familiaris
ENSDORG00000001819	Pus3	100	84.615	ENSCAFG00020010659	PUS3	100	84.615	Canis_lupus_dingo
ENSDORG00000001819	Pus3	100	83.195	ENSCHIG00000012260	PUS3	100	83.195	Capra_hircus
ENSDORG00000001819	Pus3	99	85.417	ENSTSYG00000014744	PUS3	99	85.417	Carlito_syrichta
ENSDORG00000001819	Pus3	99	83.750	ENSCAPG00000012231	PUS3	99	83.750	Cavia_aperea
ENSDORG00000001819	Pus3	99	83.750	ENSCPOG00000032587	PUS3	99	83.750	Cavia_porcellus
ENSDORG00000001819	Pus3	99	83.648	ENSCCAG00000035999	PUS3	99	83.648	Cebus_capucinus
ENSDORG00000001819	Pus3	99	84.792	ENSCATG00000043123	PUS3	99	84.792	Cercocebus_atys
ENSDORG00000001819	Pus3	99	85.208	ENSCLAG00000014947	PUS3	99	85.208	Chinchilla_lanigera
ENSDORG00000001819	Pus3	99	84.792	ENSCSAG00000002281	PUS3	99	84.792	Chlorocebus_sabaeus
ENSDORG00000001819	Pus3	79	84.921	ENSCHOG00000008442	PUS3	100	84.921	Choloepus_hoffmanni
ENSDORG00000001819	Pus3	56	69.424	ENSCPBG00000011173	PUS3	98	69.424	Chrysemys_picta_bellii
ENSDORG00000001819	Pus3	79	32.048	ENSCING00000009062	-	79	32.048	Ciona_intestinalis
ENSDORG00000001819	Pus3	80	36.476	ENSCSAVG00000002211	-	89	36.725	Ciona_savignyi
ENSDORG00000001819	Pus3	99	84.583	ENSCANG00000038729	PUS3	99	84.583	Colobus_angolensis_palliatus
ENSDORG00000001819	Pus3	99	83.576	ENSCGRG00001019842	Pus3	99	83.576	Cricetulus_griseus_chok1gshd
ENSDORG00000001819	Pus3	99	83.160	ENSCGRG00000010155	Pus3	99	83.160	Cricetulus_griseus_crigri
ENSDORG00000001819	Pus3	88	52.448	ENSCSEG00000007948	pus3	89	52.448	Cynoglossus_semilaevis
ENSDORG00000001819	Pus3	89	51.535	ENSCVAG00000022150	pus3	90	51.535	Cyprinodon_variegatus
ENSDORG00000001819	Pus3	88	54.651	ENSDARG00000028976	pus3	99	51.153	Danio_rerio
ENSDORG00000001819	Pus3	99	83.682	ENSDNOG00000040719	PUS3	99	83.682	Dasypus_novemcinctus
ENSDORG00000001819	Pus3	83	40.503	FBgn0034703	CG3045	82	40.503	Drosophila_melanogaster
ENSDORG00000001819	Pus3	99	76.667	ENSETEG00000013067	PUS3	99	76.667	Echinops_telfairi
ENSDORG00000001819	Pus3	86	48.980	ENSEBUG00000002154	pus3	65	48.980	Eptatretus_burgeri
ENSDORG00000001819	Pus3	99	85.000	ENSEASG00005023003	PUS3	99	85.000	Equus_asinus_asinus
ENSDORG00000001819	Pus3	99	85.208	ENSECAG00000007581	PUS3	99	85.208	Equus_caballus
ENSDORG00000001819	Pus3	99	81.837	ENSEEUG00000010543	PUS3	99	81.837	Erinaceus_europaeus
ENSDORG00000001819	Pus3	88	54.713	ENSELUG00000004425	pus3	92	54.817	Esox_lucius
ENSDORG00000001819	Pus3	100	84.823	ENSFCAG00000005340	PUS3	100	84.823	Felis_catus
ENSDORG00000001819	Pus3	99	63.958	ENSFALG00000005159	PUS3	100	63.958	Ficedula_albicollis
ENSDORG00000001819	Pus3	99	85.000	ENSFDAG00000020745	PUS3	99	85.000	Fukomys_damarensis
ENSDORG00000001819	Pus3	93	50.538	ENSFHEG00000010984	pus3	87	50.538	Fundulus_heteroclitus
ENSDORG00000001819	Pus3	89	51.501	ENSGMOG00000004534	pus3	95	51.501	Gadus_morhua
ENSDORG00000001819	Pus3	89	68.807	ENSGALG00000000962	PUS3	94	68.807	Gallus_gallus
ENSDORG00000001819	Pus3	91	50.108	ENSGAFG00000005615	pus3	93	50.216	Gambusia_affinis
ENSDORG00000001819	Pus3	88	52.740	ENSGACG00000002125	pus3	89	53.531	Gasterosteus_aculeatus
ENSDORG00000001819	Pus3	99	69.715	ENSGAGG00000000160	PUS3	99	69.715	Gopherus_agassizii
ENSDORG00000001819	Pus3	99	85.000	ENSGGOG00000015047	PUS3	99	85.000	Gorilla_gorilla
ENSDORG00000001819	Pus3	88	50.446	ENSHBUG00000016532	pus3	91	50.557	Haplochromis_burtoni
ENSDORG00000001819	Pus3	100	77.339	ENSHGLG00000006599	-	97	77.339	Heterocephalus_glaber_female
ENSDORG00000001819	Pus3	67	76.324	ENSHGLG00000015753	-	82	76.324	Heterocephalus_glaber_female
ENSDORG00000001819	Pus3	57	70.221	ENSHGLG00000016285	-	99	70.221	Heterocephalus_glaber_female
ENSDORG00000001819	Pus3	99	72.708	ENSHGLG00000018861	-	99	72.708	Heterocephalus_glaber_female
ENSDORG00000001819	Pus3	99	85.417	ENSHGLG00000000565	PUS3	99	85.417	Heterocephalus_glaber_female
ENSDORG00000001819	Pus3	100	68.607	ENSHGLG00100007519	-	96	69.023	Heterocephalus_glaber_male
ENSDORG00000001819	Pus3	60	75.862	ENSHGLG00100002435	-	100	75.862	Heterocephalus_glaber_male
ENSDORG00000001819	Pus3	57	71.691	ENSHGLG00100002139	-	99	71.691	Heterocephalus_glaber_male
ENSDORG00000001819	Pus3	99	79.167	ENSHGLG00100014825	-	99	79.167	Heterocephalus_glaber_male
ENSDORG00000001819	Pus3	65	81.529	ENSHGLG00100008656	-	99	81.529	Heterocephalus_glaber_male
ENSDORG00000001819	Pus3	99	69.583	ENSHGLG00100011339	-	99	69.583	Heterocephalus_glaber_male
ENSDORG00000001819	Pus3	88	51.740	ENSHCOG00000015705	pus3	92	51.501	Hippocampus_comes
ENSDORG00000001819	Pus3	88	51.467	ENSIPUG00000000105	pus3	89	51.577	Ictalurus_punctatus
ENSDORG00000001819	Pus3	99	86.458	ENSSTOG00000003721	PUS3	99	86.458	Ictidomys_tridecemlineatus
ENSDORG00000001819	Pus3	99	83.333	ENSJJAG00000011306	Pus3	99	83.333	Jaculus_jaculus
ENSDORG00000001819	Pus3	88	49.559	ENSKMAG00000016715	pus3	91	49.670	Kryptolebias_marmoratus
ENSDORG00000001819	Pus3	89	50.227	ENSLBEG00000004143	pus3	91	50.227	Labrus_bergylta
ENSDORG00000001819	Pus3	96	61.443	ENSLACG00000011161	PUS3	97	61.443	Latimeria_chalumnae
ENSDORG00000001819	Pus3	89	52.212	ENSLOCG00000011922	pus3	95	52.212	Lepisosteus_oculatus
ENSDORG00000001819	Pus3	99	83.125	ENSLAFG00000000535	PUS3	99	83.125	Loxodonta_africana
ENSDORG00000001819	Pus3	99	84.067	ENSMFAG00000041002	PUS3	99	84.067	Macaca_fascicularis
ENSDORG00000001819	Pus3	99	84.277	ENSMMUG00000041875	PUS3	99	84.277	Macaca_mulatta
ENSDORG00000001819	Pus3	99	84.277	ENSMNEG00000045347	PUS3	99	84.277	Macaca_nemestrina
ENSDORG00000001819	Pus3	99	85.000	ENSMLEG00000029053	PUS3	99	85.000	Mandrillus_leucophaeus
ENSDORG00000001819	Pus3	88	52.018	ENSMAMG00000016741	pus3	90	52.679	Mastacembelus_armatus
ENSDORG00000001819	Pus3	88	50.893	ENSMZEG00005015950	pus3	91	51.002	Maylandia_zebra
ENSDORG00000001819	Pus3	78	72.074	ENSMGAG00000000851	PUS3	96	72.074	Meleagris_gallopavo
ENSDORG00000001819	Pus3	99	84.200	ENSMAUG00000015873	Pus3	99	84.200	Mesocricetus_auratus
ENSDORG00000001819	Pus3	100	82.952	ENSMICG00000032941	PUS3	100	82.952	Microcebus_murinus
ENSDORG00000001819	Pus3	99	83.473	ENSMOCG00000004901	Pus3	99	83.473	Microtus_ochrogaster
ENSDORG00000001819	Pus3	88	53.364	ENSMMOG00000013909	pus3	93	50.542	Mola_mola
ENSDORG00000001819	Pus3	91	76.906	ENSMODG00000004222	PUS3	99	76.906	Monodelphis_domestica
ENSDORG00000001819	Pus3	88	54.273	ENSMALG00000022420	pus3	90	54.378	Monopterus_albus
ENSDORG00000001819	Pus3	99	83.437	MGP_CAROLIEiJ_G0031957	Pus3	99	86.076	Mus_caroli
ENSDORG00000001819	Pus3	100	82.851	ENSMUSG00000032103	Pus3	99	86.076	Mus_musculus
ENSDORG00000001819	Pus3	99	82.816	MGP_PahariEiJ_G0014822	Pus3	99	85.759	Mus_pahari
ENSDORG00000001819	Pus3	99	83.230	MGP_SPRETEiJ_G0033081	Pus3	99	86.076	Mus_spretus
ENSDORG00000001819	Pus3	100	84.407	ENSMPUG00000006568	PUS3	100	84.407	Mustela_putorius_furo
ENSDORG00000001819	Pus3	99	82.708	ENSMLUG00000030636	PUS3	99	82.708	Myotis_lucifugus
ENSDORG00000001819	Pus3	99	84.792	ENSNGAG00000013868	Pus3	100	84.792	Nannospalax_galili
ENSDORG00000001819	Pus3	88	51.116	ENSNBRG00000015864	pus3	92	51.225	Neolamprologus_brichardi
ENSDORG00000001819	Pus3	99	84.792	ENSNLEG00000007460	PUS3	99	84.792	Nomascus_leucogenys
ENSDORG00000001819	Pus3	98	62.762	ENSMEUG00000014040	PUS3	98	62.762	Notamacropus_eugenii
ENSDORG00000001819	Pus3	99	84.167	ENSOPRG00000007888	-	99	84.167	Ochotona_princeps
ENSDORG00000001819	Pus3	99	85.208	ENSODEG00000004280	PUS3	99	85.208	Octodon_degus
ENSDORG00000001819	Pus3	88	53.704	ENSONIG00000016224	pus3	97	53.580	Oreochromis_niloticus
ENSDORG00000001819	Pus3	98	66.173	ENSOANG00000000406	PUS3	98	66.173	Ornithorhynchus_anatinus
ENSDORG00000001819	Pus3	98	83.864	ENSOCUG00000004468	PUS3	93	83.864	Oryctolagus_cuniculus
ENSDORG00000001819	Pus3	88	49.889	ENSORLG00000008445	pus3	91	50.000	Oryzias_latipes
ENSDORG00000001819	Pus3	88	49.667	ENSORLG00020008847	pus3	94	49.032	Oryzias_latipes_hni
ENSDORG00000001819	Pus3	88	50.333	ENSORLG00015007438	pus3	97	48.649	Oryzias_latipes_hsok
ENSDORG00000001819	Pus3	88	52.036	ENSOMEG00000014321	pus3	94	51.316	Oryzias_melastigma
ENSDORG00000001819	Pus3	99	83.925	ENSOGAG00000008913	PUS3	99	83.925	Otolemur_garnettii
ENSDORG00000001819	Pus3	99	83.992	ENSOARG00000011870	PUS3	99	83.992	Ovis_aries
ENSDORG00000001819	Pus3	99	84.583	ENSPPAG00000025809	PUS3	99	84.583	Pan_paniscus
ENSDORG00000001819	Pus3	100	84.200	ENSPPRG00000005662	PUS3	100	84.200	Panthera_pardus
ENSDORG00000001819	Pus3	100	84.407	ENSPTIG00000001192	PUS3	100	84.407	Panthera_tigris_altaica
ENSDORG00000001819	Pus3	99	84.583	ENSPTRG00000004449	PUS3	99	84.583	Pan_troglodytes
ENSDORG00000001819	Pus3	99	84.792	ENSPANG00000013782	PUS3	99	84.792	Papio_anubis
ENSDORG00000001819	Pus3	89	53.915	ENSPKIG00000000646	pus3	92	53.915	Paramormyrops_kingsleyae
ENSDORG00000001819	Pus3	99	67.967	ENSPSIG00000013961	PUS3	99	67.967	Pelodiscus_sinensis
ENSDORG00000001819	Pus3	90	50.000	ENSPMGG00000000911	pus3	97	50.000	Periophthalmus_magnuspinnatus
ENSDORG00000001819	Pus3	99	84.407	ENSPEMG00000009602	Pus3	99	84.407	Peromyscus_maniculatus_bairdii
ENSDORG00000001819	Pus3	98	74.113	ENSPCIG00000010225	PUS3	97	76.629	Phascolarctos_cinereus
ENSDORG00000001819	Pus3	88	52.887	ENSPFOG00000009447	pus3	94	52.887	Poecilia_formosa
ENSDORG00000001819	Pus3	88	50.334	ENSPLAG00000023343	pus3	90	50.334	Poecilia_latipinna
ENSDORG00000001819	Pus3	88	50.334	ENSPMEG00000009870	pus3	90	50.334	Poecilia_mexicana
ENSDORG00000001819	Pus3	61	60.870	ENSPREG00000003179	pus3	57	60.870	Poecilia_reticulata
ENSDORG00000001819	Pus3	99	85.417	ENSPPYG00000004039	PUS3	99	85.417	Pongo_abelii
ENSDORG00000001819	Pus3	99	82.292	ENSPCAG00000000441	PUS3	100	82.292	Procavia_capensis
ENSDORG00000001819	Pus3	100	84.823	ENSPCOG00000019330	PUS3	100	84.823	Propithecus_coquereli
ENSDORG00000001819	Pus3	99	82.917	ENSPVAG00000002606	PUS3	99	82.917	Pteropus_vampyrus
ENSDORG00000001819	Pus3	88	50.893	ENSPNYG00000019615	pus3	91	51.002	Pundamilia_nyererei
ENSDORG00000001819	Pus3	88	52.584	ENSPNAG00000014541	pus3	89	52.691	Pygocentrus_nattereri
ENSDORG00000001819	Pus3	99	80.873	ENSRNOG00000012994	Pus3	99	80.873	Rattus_norvegicus
ENSDORG00000001819	Pus3	99	83.333	ENSRBIG00000044456	PUS3	99	83.333	Rhinopithecus_bieti
ENSDORG00000001819	Pus3	99	84.375	ENSRROG00000035245	PUS3	99	84.375	Rhinopithecus_roxellana
ENSDORG00000001819	Pus3	67	42.857	YFL001W	DEG1	71	42.857	Saccharomyces_cerevisiae
ENSDORG00000001819	Pus3	99	83.333	ENSSBOG00000022433	PUS3	99	83.333	Saimiri_boliviensis_boliviensis
ENSDORG00000001819	Pus3	99	73.389	ENSSHAG00000001382	PUS3	99	73.389	Sarcophilus_harrisii
ENSDORG00000001819	Pus3	88	57.209	ENSSFOG00015004850	pus3	91	57.209	Scleropages_formosus
ENSDORG00000001819	Pus3	88	50.000	ENSSMAG00000020340	pus3	91	50.980	Scophthalmus_maximus
ENSDORG00000001819	Pus3	88	51.556	ENSSDUG00000020825	pus3	90	51.663	Seriola_dumerili
ENSDORG00000001819	Pus3	88	51.556	ENSSLDG00000019932	pus3	90	51.663	Seriola_lalandi_dorsalis
ENSDORG00000001819	Pus3	65	82.803	ENSSARG00000013826	PUS3	100	82.803	Sorex_araneus
ENSDORG00000001819	Pus3	99	67.008	ENSSPUG00000001412	PUS3	99	67.008	Sphenodon_punctatus
ENSDORG00000001819	Pus3	88	53.256	ENSSPAG00000019221	pus3	92	53.364	Stegastes_partitus
ENSDORG00000001819	Pus3	99	83.958	ENSSSCG00000015222	PUS3	100	83.958	Sus_scrofa
ENSDORG00000001819	Pus3	91	67.568	ENSTGUG00000000778	-	100	67.568	Taeniopygia_guttata
ENSDORG00000001819	Pus3	88	49.888	ENSTRUG00000013050	pus3	95	49.888	Takifugu_rubripes
ENSDORG00000001819	Pus3	94	48.401	ENSTNIG00000004929	PUS3	98	48.401	Tetraodon_nigroviridis
ENSDORG00000001819	Pus3	75	50.649	ENSTNIG00000010307	pus3	93	50.649	Tetraodon_nigroviridis
ENSDORG00000001819	Pus3	95	75.983	ENSTBEG00000004382	PUS3	100	75.983	Tupaia_belangeri
ENSDORG00000001819	Pus3	99	86.042	ENSTTRG00000012167	PUS3	99	86.042	Tursiops_truncatus
ENSDORG00000001819	Pus3	100	85.031	ENSUAMG00000009297	PUS3	100	85.031	Ursus_americanus
ENSDORG00000001819	Pus3	100	85.447	ENSUMAG00000001795	PUS3	100	85.447	Ursus_maritimus
ENSDORG00000001819	Pus3	100	82.952	ENSVPAG00000001495	PUS3	100	82.952	Vicugna_pacos
ENSDORG00000001819	Pus3	100	84.407	ENSVVUG00000020152	PUS3	100	84.407	Vulpes_vulpes
ENSDORG00000001819	Pus3	93	55.824	ENSXETG00000024532	pus3	84	55.824	Xenopus_tropicalis
ENSDORG00000001819	Pus3	92	50.773	ENSXMAG00000028016	pus3	95	50.773	Xiphophorus_maculatus
ENSDORG00000001819	Pus3	52	60.000	ENSXMAG00000025146	pus3	78	60.000	Xiphophorus_maculatus
ENSDORG00000001819	Pus3	70	53.061	ENSXMAG00000025659	PUS3	52	56.913	Xiphophorus_maculatus
ENSDORG00000001819	Pus3	74	50.532	ENSXMAG00000029934	pus3	86	50.532	Xiphophorus_maculatus
ENSDORG00000001819	Pus3	74	50.667	ENSXMAG00000025077	pus3	86	50.667	Xiphophorus_maculatus
ENSDORG00000001819	Pus3	52	60.000	ENSXMAG00000028945	pus3	84	60.000	Xiphophorus_maculatus