EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000002050 (Gene tree)
Gene ID: 105995806
Gene Symbol: Chd8
Alias: 5830451P18Rik|Duplin
Full Name: chromodomain helicase DNA binding protein 8
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 43995 bases
Position: chrKN672467.1:1908022-1952016
Accession: 105995806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000001923	ResIII	PF04851.15	6.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000002054	-	7437	XM_013029668	ENSDORP00000001923	2478 (aa)	XP_012885122	UPI000BAD0DA0

Gene Model

Click here to download ENSDORG00000002050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000002050's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000002050	Chd8	53	70.815	ENSDORG00000008523	-	73	60.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000002050	Chd8	98	96.413	ENSG00000100888	CHD8	99	96.638	Homo_sapiens
ENSDORG00000002050	Chd8	61	69.804	ENSAPOG00000015560	chd8	82	59.185	Acanthochromis_polyacanthus
ENSDORG00000002050	Chd8	60	66.534	ENSAPOG00000009351	chd7	64	61.440	Acanthochromis_polyacanthus
ENSDORG00000002050	Chd8	98	95.931	ENSAMEG00000006307	CHD8	95	95.931	Ailuropoda_melanoleuca
ENSDORG00000002050	Chd8	52	69.582	ENSACIG00000001590	chd7	60	69.529	Amphilophus_citrinellus
ENSDORG00000002050	Chd8	79	60.590	ENSACIG00000006440	chd8	82	60.532	Amphilophus_citrinellus
ENSDORG00000002050	Chd8	56	69.784	ENSAOCG00000002337	chd7	60	70.069	Amphiprion_ocellaris
ENSDORG00000002050	Chd8	79	59.944	ENSAOCG00000016793	chd8	82	60.216	Amphiprion_ocellaris
ENSDORG00000002050	Chd8	77	66.685	ENSATEG00000007108	chd8	83	59.223	Anabas_testudineus
ENSDORG00000002050	Chd8	61	61.890	ENSATEG00000002590	chd7	60	67.229	Anabas_testudineus
ENSDORG00000002050	Chd8	66	63.114	ENSAPLG00000005873	CHD7	55	63.248	Anas_platyrhynchos
ENSDORG00000002050	Chd8	99	74.233	ENSACAG00000003139	CHD8	95	74.578	Anolis_carolinensis
ENSDORG00000002050	Chd8	98	96.324	ENSANAG00000037714	CHD8	95	96.324	Aotus_nancymaae
ENSDORG00000002050	Chd8	79	63.465	ENSACLG00000019692	chd8	93	63.327	Astatotilapia_calliptera
ENSDORG00000002050	Chd8	59	64.840	ENSAMXG00000006180	chd7	60	65.627	Astyanax_mexicanus
ENSDORG00000002050	Chd8	56	69.697	ENSBTAG00000021841	CHD7	51	68.854	Bos_taurus
ENSDORG00000002050	Chd8	87	96.208	ENSBTAG00000020422	CHD8	94	96.208	Bos_taurus
ENSDORG00000002050	Chd8	98	96.191	ENSCJAG00000009002	CHD8	95	96.191	Callithrix_jacchus
ENSDORG00000002050	Chd8	98	96.019	ENSCAFG00000005626	CHD8	95	96.019	Canis_familiaris
ENSDORG00000002050	Chd8	60	69.851	ENSCAFG00000007167	CHD7	51	68.975	Canis_familiaris
ENSDORG00000002050	Chd8	59	69.427	ENSCAFG00020015856	CHD7	50	68.585	Canis_lupus_dingo
ENSDORG00000002050	Chd8	98	95.852	ENSCAFG00020014565	CHD8	97	97.313	Canis_lupus_dingo
ENSDORG00000002050	Chd8	98	96.280	ENSCHIG00000026157	CHD8	95	96.280	Capra_hircus
ENSDORG00000002050	Chd8	98	95.896	ENSTSYG00000011939	CHD8	95	95.896	Carlito_syrichta
ENSDORG00000002050	Chd8	95	90.547	ENSCAPG00000016749	CHD8	93	90.042	Cavia_aperea
ENSDORG00000002050	Chd8	98	95.573	ENSCPOG00000002538	CHD8	95	95.573	Cavia_porcellus
ENSDORG00000002050	Chd8	98	96.368	ENSCCAG00000020467	CHD8	95	96.368	Cebus_capucinus
ENSDORG00000002050	Chd8	98	96.413	ENSCATG00000004861	CHD8	95	96.413	Cercocebus_atys
ENSDORG00000002050	Chd8	99	96.147	ENSCLAG00000001966	CHD8	95	96.147	Chinchilla_lanigera
ENSDORG00000002050	Chd8	57	68.501	ENSCLAG00000004679	CHD7	55	61.806	Chinchilla_lanigera
ENSDORG00000002050	Chd8	98	96.058	ENSCSAG00000016489	CHD8	95	96.058	Chlorocebus_sabaeus
ENSDORG00000002050	Chd8	90	93.600	ENSCHOG00000003782	CHD8	92	93.600	Choloepus_hoffmanni
ENSDORG00000002050	Chd8	57	73.382	ENSCHOG00000008478	CHD7	56	73.807	Choloepus_hoffmanni
ENSDORG00000002050	Chd8	67	62.478	ENSCPBG00000021517	CHD7	76	69.327	Chrysemys_picta_bellii
ENSDORG00000002050	Chd8	94	81.426	ENSCPBG00000012687	CHD8	92	80.722	Chrysemys_picta_bellii
ENSDORG00000002050	Chd8	98	96.324	ENSCANG00000042948	CHD8	95	96.324	Colobus_angolensis_palliatus
ENSDORG00000002050	Chd8	98	95.261	ENSCGRG00001014351	Chd8	95	95.261	Cricetulus_griseus_chok1gshd
ENSDORG00000002050	Chd8	58	66.736	ENSCGRG00000000481	Chd7	53	63.677	Cricetulus_griseus_crigri
ENSDORG00000002050	Chd8	98	95.261	ENSCGRG00000009710	Chd8	100	90.431	Cricetulus_griseus_crigri
ENSDORG00000002050	Chd8	65	60.493	ENSCSEG00000017886	chd7	61	63.862	Cynoglossus_semilaevis
ENSDORG00000002050	Chd8	79	60.787	ENSCSEG00000021155	chd8	81	60.491	Cynoglossus_semilaevis
ENSDORG00000002050	Chd8	66	68.977	ENSDARG00000075211	chd7	62	64.759	Danio_rerio
ENSDORG00000002050	Chd8	81	61.443	ENSDARG00000075543	chd8	81	67.667	Danio_rerio
ENSDORG00000002050	Chd8	99	95.704	ENSDNOG00000005838	CHD8	95	95.704	Dasypus_novemcinctus
ENSDORG00000002050	Chd8	81	93.557	ENSETEG00000012353	CHD8	92	93.557	Echinops_telfairi
ENSDORG00000002050	Chd8	74	59.508	ENSEBUG00000007607	chd8	82	59.058	Eptatretus_burgeri
ENSDORG00000002050	Chd8	98	95.896	ENSEASG00005010882	CHD8	100	91.929	Equus_asinus_asinus
ENSDORG00000002050	Chd8	60	68.036	ENSEASG00005016258	CHD7	51	68.793	Equus_asinus_asinus
ENSDORG00000002050	Chd8	60	68.036	ENSECAG00000001445	CHD7	56	68.863	Equus_caballus
ENSDORG00000002050	Chd8	100	95.252	ENSECAG00000016102	CHD8	99	95.252	Equus_caballus
ENSDORG00000002050	Chd8	70	100.000	ENSEEUG00000003523	CHD8	75	100.000	Erinaceus_europaeus
ENSDORG00000002050	Chd8	62	62.466	ENSELUG00000024442	chd7	63	62.278	Esox_lucius
ENSDORG00000002050	Chd8	82	62.058	ENSELUG00000004302	chd8	84	61.549	Esox_lucius
ENSDORG00000002050	Chd8	98	96.191	ENSFCAG00000013859	CHD8	100	93.162	Felis_catus
ENSDORG00000002050	Chd8	66	63.410	ENSFALG00000005570	CHD7	55	63.308	Ficedula_albicollis
ENSDORG00000002050	Chd8	98	95.926	ENSFDAG00000011368	CHD8	95	95.926	Fukomys_damarensis
ENSDORG00000002050	Chd8	67	62.921	ENSFDAG00000000528	CHD7	51	66.107	Fukomys_damarensis
ENSDORG00000002050	Chd8	70	67.128	ENSGMOG00000015075	chd8	85	66.532	Gadus_morhua
ENSDORG00000002050	Chd8	50	69.979	ENSGMOG00000004232	chd7	60	69.979	Gadus_morhua
ENSDORG00000002050	Chd8	59	67.197	ENSGAFG00000006858	chd7	57	64.865	Gambusia_affinis
ENSDORG00000002050	Chd8	53	67.625	ENSGACG00000014897	chd7	62	67.576	Gasterosteus_aculeatus
ENSDORG00000002050	Chd8	71	67.892	ENSGACG00000014096	chd8	85	67.581	Gasterosteus_aculeatus
ENSDORG00000002050	Chd8	67	61.384	ENSGAGG00000017996	CHD7	74	71.132	Gopherus_agassizii
ENSDORG00000002050	Chd8	95	80.856	ENSGAGG00000022951	CHD8	94	83.937	Gopherus_agassizii
ENSDORG00000002050	Chd8	98	96.457	ENSGGOG00000002251	CHD8	95	96.457	Gorilla_gorilla
ENSDORG00000002050	Chd8	79	60.525	ENSHBUG00000002850	chd8	82	60.514	Haplochromis_burtoni
ENSDORG00000002050	Chd8	98	96.147	ENSHGLG00000003559	CHD8	95	96.147	Heterocephalus_glaber_female
ENSDORG00000002050	Chd8	98	96.147	ENSHGLG00100001031	CHD8	95	96.147	Heterocephalus_glaber_male
ENSDORG00000002050	Chd8	66	66.693	ENSHCOG00000014380	chd7	58	70.312	Hippocampus_comes
ENSDORG00000002050	Chd8	79	62.941	ENSHCOG00000016611	chd8	91	62.334	Hippocampus_comes
ENSDORG00000002050	Chd8	57	61.739	ENSIPUG00000007585	chd7	61	61.908	Ictalurus_punctatus
ENSDORG00000002050	Chd8	79	61.030	ENSIPUG00000019891	chd8	82	60.539	Ictalurus_punctatus
ENSDORG00000002050	Chd8	98	96.546	ENSSTOG00000001854	CHD8	95	96.546	Ictidomys_tridecemlineatus
ENSDORG00000002050	Chd8	98	95.748	ENSJJAG00000000408	Chd8	95	95.748	Jaculus_jaculus
ENSDORG00000002050	Chd8	79	59.473	ENSKMAG00000020106	chd8	81	59.889	Kryptolebias_marmoratus
ENSDORG00000002050	Chd8	98	71.733	ENSLACG00000011367	CHD8	85	74.842	Latimeria_chalumnae
ENSDORG00000002050	Chd8	98	95.748	ENSLAFG00000009358	CHD8	95	95.748	Loxodonta_africana
ENSDORG00000002050	Chd8	98	96.072	ENSMFAG00000035402	CHD8	95	96.326	Macaca_fascicularis
ENSDORG00000002050	Chd8	56	69.611	ENSMFAG00000041825	CHD7	57	68.906	Macaca_fascicularis
ENSDORG00000002050	Chd8	98	96.072	ENSMMUG00000015002	CHD8	95	96.072	Macaca_mulatta
ENSDORG00000002050	Chd8	98	96.413	ENSMNEG00000031076	CHD8	95	96.413	Macaca_nemestrina
ENSDORG00000002050	Chd8	98	96.413	ENSMLEG00000035911	CHD8	95	96.413	Mandrillus_leucophaeus
ENSDORG00000002050	Chd8	79	59.480	ENSMAMG00000016297	chd8	82	59.321	Mastacembelus_armatus
ENSDORG00000002050	Chd8	79	60.794	ENSMZEG00005012027	chd8	82	60.857	Maylandia_zebra
ENSDORG00000002050	Chd8	98	88.264	ENSMAUG00000015827	Chd8	95	88.313	Mesocricetus_auratus
ENSDORG00000002050	Chd8	98	95.984	ENSMICG00000007735	CHD8	95	95.984	Microcebus_murinus
ENSDORG00000002050	Chd8	94	94.995	ENSMOCG00000013700	Chd8	94	94.995	Microtus_ochrogaster
ENSDORG00000002050	Chd8	79	60.687	ENSMMOG00000013335	chd8	83	59.906	Mola_mola
ENSDORG00000002050	Chd8	90	91.585	ENSMODG00000006219	CHD8	94	91.633	Monodelphis_domestica
ENSDORG00000002050	Chd8	79	59.803	ENSMALG00000011572	chd8	82	60.311	Monopterus_albus
ENSDORG00000002050	Chd8	58	69.739	ENSMALG00000004389	chd7	58	70.026	Monopterus_albus
ENSDORG00000002050	Chd8	98	95.221	MGP_CAROLIEiJ_G0019237	Chd8	95	95.221	Mus_caroli
ENSDORG00000002050	Chd8	98	95.265	ENSMUSG00000053754	Chd8	95	95.265	Mus_musculus
ENSDORG00000002050	Chd8	98	95.394	MGP_PahariEiJ_G0030258	Chd8	95	95.394	Mus_pahari
ENSDORG00000002050	Chd8	56	69.802	ENSMPUG00000002338	CHD7	56	68.970	Mustela_putorius_furo
ENSDORG00000002050	Chd8	98	96.236	ENSMPUG00000000174	CHD8	95	96.236	Mustela_putorius_furo
ENSDORG00000002050	Chd8	99	95.793	ENSMLUG00000001878	CHD8	96	95.793	Myotis_lucifugus
ENSDORG00000002050	Chd8	98	95.616	ENSNGAG00000022658	Chd8	95	95.616	Nannospalax_galili
ENSDORG00000002050	Chd8	77	66.890	ENSNBRG00000017428	chd8	82	60.267	Neolamprologus_brichardi
ENSDORG00000002050	Chd8	64	59.614	ENSNBRG00000001280	chd7	59	65.808	Neolamprologus_brichardi
ENSDORG00000002050	Chd8	98	95.808	ENSNLEG00000014445	CHD8	95	95.808	Nomascus_leucogenys
ENSDORG00000002050	Chd8	59	69.541	ENSNLEG00000002027	CHD7	51	68.837	Nomascus_leucogenys
ENSDORG00000002050	Chd8	91	91.050	ENSMEUG00000011732	CHD8	92	91.050	Notamacropus_eugenii
ENSDORG00000002050	Chd8	81	94.815	ENSOPRG00000016120	CHD8	90	94.815	Ochotona_princeps
ENSDORG00000002050	Chd8	90	95.660	ENSODEG00000001047	CHD8	93	95.660	Octodon_degus
ENSDORG00000002050	Chd8	66	60.954	ENSONIG00000016614	chd7	50	64.565	Oreochromis_niloticus
ENSDORG00000002050	Chd8	79	63.721	ENSONIG00000015569	chd8	85	63.570	Oreochromis_niloticus
ENSDORG00000002050	Chd8	58	68.005	ENSOANG00000005042	CHD7	68	68.698	Ornithorhynchus_anatinus
ENSDORG00000002050	Chd8	91	96.110	ENSOCUG00000010822	CHD8	100	96.110	Oryctolagus_cuniculus
ENSDORG00000002050	Chd8	56	69.753	ENSOCUG00000010034	CHD7	59	69.018	Oryctolagus_cuniculus
ENSDORG00000002050	Chd8	71	66.890	ENSORLG00000012103	chd8	83	60.639	Oryzias_latipes
ENSDORG00000002050	Chd8	79	60.113	ENSORLG00020008031	chd8	82	60.009	Oryzias_latipes_hni
ENSDORG00000002050	Chd8	81	60.957	ENSOMEG00000012832	chd8	83	61.163	Oryzias_melastigma
ENSDORG00000002050	Chd8	98	95.970	ENSOGAG00000002722	CHD8	95	95.970	Otolemur_garnettii
ENSDORG00000002050	Chd8	98	96.149	ENSOARG00000019643	CHD8	95	96.149	Ovis_aries
ENSDORG00000002050	Chd8	99	96.028	ENSPPAG00000039987	CHD8	96	96.028	Pan_paniscus
ENSDORG00000002050	Chd8	98	96.147	ENSPPRG00000006591	CHD8	95	96.147	Panthera_pardus
ENSDORG00000002050	Chd8	57	68.352	ENSPTIG00000011702	CHD7	50	68.283	Panthera_tigris_altaica
ENSDORG00000002050	Chd8	98	96.147	ENSPTIG00000021989	CHD8	95	96.147	Panthera_tigris_altaica
ENSDORG00000002050	Chd8	98	96.280	ENSPTRG00000006124	CHD8	95	96.280	Pan_troglodytes
ENSDORG00000002050	Chd8	98	96.028	ENSPANG00000011742	CHD8	95	96.028	Papio_anubis
ENSDORG00000002050	Chd8	62	73.561	ENSPKIG00000009142	chd8	72	67.151	Paramormyrops_kingsleyae
ENSDORG00000002050	Chd8	66	62.148	ENSPKIG00000009637	chd7	52	63.267	Paramormyrops_kingsleyae
ENSDORG00000002050	Chd8	66	59.735	ENSPMGG00000018543	chd7	62	65.238	Periophthalmus_magnuspinnatus
ENSDORG00000002050	Chd8	99	95.483	ENSPEMG00000022977	Chd8	96	95.483	Peromyscus_maniculatus_bairdii
ENSDORG00000002050	Chd8	98	90.965	ENSPCIG00000020931	CHD8	95	91.679	Phascolarctos_cinereus
ENSDORG00000002050	Chd8	62	65.014	ENSPFOG00000004891	chd7	85	64.698	Poecilia_formosa
ENSDORG00000002050	Chd8	82	59.981	ENSPFOG00000016369	chd8	84	59.982	Poecilia_formosa
ENSDORG00000002050	Chd8	79	60.525	ENSPLAG00000018522	chd8	83	60.373	Poecilia_latipinna
ENSDORG00000002050	Chd8	52	68.124	ENSPMEG00000005879	chd7	60	65.052	Poecilia_mexicana
ENSDORG00000002050	Chd8	79	60.609	ENSPMEG00000006541	chd8	82	60.420	Poecilia_mexicana
ENSDORG00000002050	Chd8	79	60.497	ENSPREG00000021867	chd8	81	59.963	Poecilia_reticulata
ENSDORG00000002050	Chd8	59	69.682	ENSPPYG00000018618	CHD7	51	68.975	Pongo_abelii
ENSDORG00000002050	Chd8	98	96.236	ENSPPYG00000005596	CHD8	95	96.236	Pongo_abelii
ENSDORG00000002050	Chd8	81	96.463	ENSPCAG00000007099	CHD8	86	96.463	Procavia_capensis
ENSDORG00000002050	Chd8	98	95.035	ENSPCOG00000014628	CHD8	95	95.035	Propithecus_coquereli
ENSDORG00000002050	Chd8	94	95.619	ENSPVAG00000000272	CHD8	96	95.619	Pteropus_vampyrus
ENSDORG00000002050	Chd8	66	57.592	ENSPNYG00000012490	chd7	62	63.562	Pundamilia_nyererei
ENSDORG00000002050	Chd8	79	60.612	ENSPNYG00000018020	chd8	82	60.600	Pundamilia_nyererei
ENSDORG00000002050	Chd8	82	61.646	ENSPNAG00000003683	chd8	83	62.101	Pygocentrus_nattereri
ENSDORG00000002050	Chd8	61	62.003	ENSPNAG00000011245	chd7	69	61.387	Pygocentrus_nattereri
ENSDORG00000002050	Chd8	98	95.350	ENSRNOG00000025011	Chd8	95	95.350	Rattus_norvegicus
ENSDORG00000002050	Chd8	98	93.114	ENSRBIG00000039239	CHD8	95	93.114	Rhinopithecus_bieti
ENSDORG00000002050	Chd8	98	96.413	ENSRROG00000044285	CHD8	95	96.413	Rhinopithecus_roxellana
ENSDORG00000002050	Chd8	98	96.324	ENSSBOG00000023442	CHD8	100	93.159	Saimiri_boliviensis_boliviensis
ENSDORG00000002050	Chd8	98	92.035	ENSSHAG00000008118	CHD8	95	92.216	Sarcophilus_harrisii
ENSDORG00000002050	Chd8	58	70.616	ENSSFOG00015011577	chd8	82	60.364	Scleropages_formosus
ENSDORG00000002050	Chd8	66	62.478	ENSSFOG00015015077	chd7	50	68.816	Scleropages_formosus
ENSDORG00000002050	Chd8	54	64.701	ENSSMAG00000001453	-	51	68.000	Scophthalmus_maximus
ENSDORG00000002050	Chd8	81	60.963	ENSSMAG00000014060	chd8	83	61.082	Scophthalmus_maximus
ENSDORG00000002050	Chd8	78	66.481	ENSSDUG00000012439	chd8	83	59.601	Seriola_dumerili
ENSDORG00000002050	Chd8	82	60.823	ENSSLDG00000001679	chd8	84	60.744	Seriola_lalandi_dorsalis
ENSDORG00000002050	Chd8	79	92.882	ENSSARG00000004849	CHD8	93	92.882	Sorex_araneus
ENSDORG00000002050	Chd8	67	61.489	ENSSPUG00000009235	CHD7	51	66.176	Sphenodon_punctatus
ENSDORG00000002050	Chd8	79	59.783	ENSSPAG00000022956	chd8	82	60.085	Stegastes_partitus
ENSDORG00000002050	Chd8	61	66.905	ENSSPAG00000006320	chd7	60	67.407	Stegastes_partitus
ENSDORG00000002050	Chd8	98	96.236	ENSSSCG00000002127	CHD8	95	96.236	Sus_scrofa
ENSDORG00000002050	Chd8	79	60.932	ENSTRUG00000006682	chd8	98	79.558	Takifugu_rubripes
ENSDORG00000002050	Chd8	79	63.645	ENSTNIG00000007932	chd8	85	63.274	Tetraodon_nigroviridis
ENSDORG00000002050	Chd8	63	66.575	ENSTNIG00000002647	chd7	89	61.196	Tetraodon_nigroviridis
ENSDORG00000002050	Chd8	70	100.000	ENSTBEG00000012606	CHD8	76	100.000	Tupaia_belangeri
ENSDORG00000002050	Chd8	87	93.276	ENSTTRG00000016076	CHD8	94	93.276	Tursiops_truncatus
ENSDORG00000002050	Chd8	68	95.491	ENSUAMG00000004198	CHD8	99	93.735	Ursus_americanus
ENSDORG00000002050	Chd8	56	69.851	ENSUAMG00000025734	CHD7	59	67.230	Ursus_americanus
ENSDORG00000002050	Chd8	98	95.719	ENSUMAG00000004045	CHD8	100	92.741	Ursus_maritimus
ENSDORG00000002050	Chd8	60	68.660	ENSUMAG00000010436	CHD7	71	68.512	Ursus_maritimus
ENSDORG00000002050	Chd8	66	100.000	ENSVPAG00000007359	CHD8	68	100.000	Vicugna_pacos
ENSDORG00000002050	Chd8	96	96.280	ENSVVUG00000009444	CHD8	100	93.312	Vulpes_vulpes
ENSDORG00000002050	Chd8	59	69.851	ENSVVUG00000018063	CHD7	51	68.975	Vulpes_vulpes
ENSDORG00000002050	Chd8	68	61.918	ENSXETG00000026004	chd8	56	63.363	Xenopus_tropicalis
ENSDORG00000002050	Chd8	86	69.701	ENSXETG00000017194	CHD8	100	86.421	Xenopus_tropicalis