EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000002139 (Gene tree)
Gene ID: 105993389
Gene Symbol: Aptx
Alias: 2410016G21Rik
Full Name: aprataxin
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 9543 bases
Position: chrKN672441.1:2329720-2339262
Accession: 105993389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000023422	DcpS_C	PF11969.8	2.5e-35	1	1
ENSDORP00000002005	DcpS_C	PF11969.8	4.8e-35	1	1
ENSDORP00000024462	DcpS_C	PF11969.8	5.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000030626	-	723	XM_013026630	ENSDORP00000023422	240 (aa)	XP_012882084	UPI000BAD2563
ENSDORT00000002140	-	987	XM_013026628	ENSDORP00000002005	328 (aa)	XP_012882082	UPI000BAD1EFC
ENSDORT00000026204	-	1035	-	ENSDORP00000024462	344 (aa)	-	UPI000BAD02EC

Gene Model

Click here to download ENSDORG00000002139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000002139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000002139	Aptx	100	91.304	ENSG00000137074	APTX	100	84.840	Homo_sapiens
ENSDORG00000002139	Aptx	99	65.174	ENSAPOG00000008785	aptx	99	60.299	Acanthochromis_polyacanthus
ENSDORG00000002139	Aptx	100	84.772	ENSAMEG00000007648	APTX	97	83.478	Ailuropoda_melanoleuca
ENSDORG00000002139	Aptx	99	65.497	ENSACIG00000002035	aptx	99	58.716	Amphilophus_citrinellus
ENSDORG00000002139	Aptx	99	65.000	ENSAOCG00000000634	aptx	99	60.961	Amphiprion_ocellaris
ENSDORG00000002139	Aptx	99	69.355	ENSAPEG00000017253	aptx	99	60.961	Amphiprion_percula
ENSDORG00000002139	Aptx	99	69.492	ENSATEG00000017383	aptx	99	60.542	Anabas_testudineus
ENSDORG00000002139	Aptx	89	65.581	ENSAPLG00000015645	APTX	100	58.696	Anas_platyrhynchos
ENSDORG00000002139	Aptx	100	76.271	ENSACAG00000003581	APTX	95	61.988	Anolis_carolinensis
ENSDORG00000002139	Aptx	100	91.304	ENSANAG00000030160	APTX	100	82.335	Aotus_nancymaae
ENSDORG00000002139	Aptx	99	61.631	ENSACLG00000018887	aptx	100	61.631	Astatotilapia_calliptera
ENSDORG00000002139	Aptx	99	72.376	ENSAMXG00000039899	aptx	99	59.701	Astyanax_mexicanus
ENSDORG00000002139	Aptx	100	90.761	ENSBTAG00000013947	APTX	99	83.815	Bos_taurus
ENSDORG00000002139	Aptx	100	90.217	ENSCJAG00000007940	APTX	100	84.593	Callithrix_jacchus
ENSDORG00000002139	Aptx	100	90.217	ENSCAFG00000001812	APTX	100	84.548	Canis_familiaris
ENSDORG00000002139	Aptx	100	90.217	ENSCAFG00020015598	APTX	100	84.548	Canis_lupus_dingo
ENSDORG00000002139	Aptx	100	90.761	ENSCHIG00000012896	APTX	100	85.423	Capra_hircus
ENSDORG00000002139	Aptx	100	89.130	ENSTSYG00000003041	APTX	100	84.257	Carlito_syrichta
ENSDORG00000002139	Aptx	100	77.083	ENSCAPG00000013470	APTX	100	92.683	Cavia_aperea
ENSDORG00000002139	Aptx	100	90.833	ENSCPOG00000005975	APTX	100	92.391	Cavia_porcellus
ENSDORG00000002139	Aptx	100	90.217	ENSCCAG00000036783	APTX	100	84.884	Cebus_capucinus
ENSDORG00000002139	Aptx	100	90.761	ENSCATG00000042639	APTX	97	84.884	Cercocebus_atys
ENSDORG00000002139	Aptx	100	91.848	ENSCLAG00000012185	APTX	100	91.848	Chinchilla_lanigera
ENSDORG00000002139	Aptx	100	91.304	ENSCSAG00000009885	APTX	97	84.483	Chlorocebus_sabaeus
ENSDORG00000002139	Aptx	100	77.473	ENSCPBG00000023973	APTX	98	64.873	Chrysemys_picta_bellii
ENSDORG00000002139	Aptx	96	47.644	ENSCING00000008741	-	94	40.390	Ciona_intestinalis
ENSDORG00000002139	Aptx	97	50.867	ENSCSAVG00000008038	-	98	38.950	Ciona_savignyi
ENSDORG00000002139	Aptx	100	90.303	ENSCANG00000037253	APTX	100	84.257	Colobus_angolensis_palliatus
ENSDORG00000002139	Aptx	99	91.209	ENSCGRG00001000705	Aptx	99	91.209	Cricetulus_griseus_chok1gshd
ENSDORG00000002139	Aptx	99	91.209	ENSCGRG00000014159	Aptx	99	91.209	Cricetulus_griseus_crigri
ENSDORG00000002139	Aptx	99	64.407	ENSCSEG00000009549	aptx	99	58.859	Cynoglossus_semilaevis
ENSDORG00000002139	Aptx	99	59.292	ENSCVAG00000011942	aptx	99	58.036	Cyprinodon_variegatus
ENSDORG00000002139	Aptx	99	70.556	ENSDARG00000027143	aptx	100	60.317	Danio_rerio
ENSDORG00000002139	Aptx	100	89.617	ENSDNOG00000018498	APTX	97	83.478	Dasypus_novemcinctus
ENSDORG00000002139	Aptx	74	40.000	FBgn0038704	CG5316	92	47.287	Drosophila_melanogaster
ENSDORG00000002139	Aptx	75	88.889	ENSETEG00000012459	APTX	78	80.645	Echinops_telfairi
ENSDORG00000002139	Aptx	98	57.714	ENSEBUG00000013914	aptx	95	46.991	Eptatretus_burgeri
ENSDORG00000002139	Aptx	99	90.556	ENSEASG00005004566	APTX	99	85.337	Equus_asinus_asinus
ENSDORG00000002139	Aptx	99	91.250	ENSECAG00000012674	APTX	92	84.840	Equus_caballus
ENSDORG00000002139	Aptx	79	92.481	ENSEEUG00000010693	APTX	97	81.145	Erinaceus_europaeus
ENSDORG00000002139	Aptx	100	89.674	ENSFCAG00000008728	APTX	100	83.673	Felis_catus
ENSDORG00000002139	Aptx	100	73.770	ENSFALG00000001230	APTX	100	62.319	Ficedula_albicollis
ENSDORG00000002139	Aptx	100	91.304	ENSFDAG00000013752	APTX	100	90.833	Fukomys_damarensis
ENSDORG00000002139	Aptx	75	69.274	ENSFHEG00000021328	aptx	73	53.497	Fundulus_heteroclitus
ENSDORG00000002139	Aptx	99	65.385	ENSGMOG00000012505	aptx	99	57.229	Gadus_morhua
ENSDORG00000002139	Aptx	100	73.770	ENSGALG00000001954	APTX	100	60.511	Gallus_gallus
ENSDORG00000002139	Aptx	99	68.889	ENSGAFG00000005086	aptx	99	58.912	Gambusia_affinis
ENSDORG00000002139	Aptx	99	62.085	ENSGACG00000017887	aptx	99	59.459	Gasterosteus_aculeatus
ENSDORG00000002139	Aptx	100	77.473	ENSGAGG00000013230	APTX	100	65.341	Gopherus_agassizii
ENSDORG00000002139	Aptx	79	93.284	ENSGGOG00000014232	APTX	96	77.551	Gorilla_gorilla
ENSDORG00000002139	Aptx	99	61.631	ENSHBUG00000021058	aptx	100	61.631	Haplochromis_burtoni
ENSDORG00000002139	Aptx	100	90.000	ENSHGLG00000015093	APTX	100	90.000	Heterocephalus_glaber_female
ENSDORG00000002139	Aptx	100	90.000	ENSHGLG00100013482	APTX	100	90.000	Heterocephalus_glaber_male
ENSDORG00000002139	Aptx	99	64.921	ENSHCOG00000018216	aptx	96	59.271	Hippocampus_comes
ENSDORG00000002139	Aptx	99	73.333	ENSIPUG00000017548	aptx	99	59.226	Ictalurus_punctatus
ENSDORG00000002139	Aptx	100	90.164	ENSSTOG00000005185	APTX	100	89.674	Ictidomys_tridecemlineatus
ENSDORG00000002139	Aptx	97	89.617	ENSJJAG00000015653	Aptx	100	78.743	Jaculus_jaculus
ENSDORG00000002139	Aptx	100	66.102	ENSKMAG00000000117	aptx	100	57.784	Kryptolebias_marmoratus
ENSDORG00000002139	Aptx	99	61.413	ENSLBEG00000021489	APTX	99	52.905	Labrus_bergylta
ENSDORG00000002139	Aptx	99	61.538	ENSLBEG00000015353	aptx	99	58.601	Labrus_bergylta
ENSDORG00000002139	Aptx	99	73.889	ENSLACG00000003376	APTX	99	59.444	Latimeria_chalumnae
ENSDORG00000002139	Aptx	99	67.797	ENSLOCG00000011556	aptx	95	61.696	Lepisosteus_oculatus
ENSDORG00000002139	Aptx	100	84.457	ENSLAFG00000005665	APTX	100	84.058	Loxodonta_africana
ENSDORG00000002139	Aptx	99	92.308	ENSMFAG00000043141	APTX	97	85.673	Macaca_fascicularis
ENSDORG00000002139	Aptx	100	91.304	ENSMMUG00000007724	APTX	97	85.174	Macaca_mulatta
ENSDORG00000002139	Aptx	100	90.761	ENSMNEG00000042341	APTX	100	84.840	Macaca_nemestrina
ENSDORG00000002139	Aptx	100	90.761	ENSMLEG00000035137	APTX	100	85.131	Mandrillus_leucophaeus
ENSDORG00000002139	Aptx	99	62.189	ENSMAMG00000018377	aptx	99	58.631	Mastacembelus_armatus
ENSDORG00000002139	Aptx	99	61.364	ENSMZEG00005022621	aptx	100	61.329	Maylandia_zebra
ENSDORG00000002139	Aptx	75	73.481	ENSMGAG00000005736	APTX	100	73.481	Meleagris_gallopavo
ENSDORG00000002139	Aptx	99	90.717	ENSMAUG00000006039	Aptx	99	90.717	Mesocricetus_auratus
ENSDORG00000002139	Aptx	100	90.217	ENSMICG00000006603	APTX	98	83.237	Microcebus_murinus
ENSDORG00000002139	Aptx	99	90.756	ENSMOCG00000000869	Aptx	99	90.756	Microtus_ochrogaster
ENSDORG00000002139	Aptx	99	73.743	ENSMMOG00000007028	aptx	99	61.677	Mola_mola
ENSDORG00000002139	Aptx	99	63.934	ENSMODG00000003365	APTX	99	61.671	Monodelphis_domestica
ENSDORG00000002139	Aptx	99	53.474	ENSMALG00000003828	aptx	99	54.054	Monopterus_albus
ENSDORG00000002139	Aptx	99	91.176	MGP_CAROLIEiJ_G0025897	-	99	91.176	Mus_caroli
ENSDORG00000002139	Aptx	99	92.017	ENSMUSG00000028411	Aptx	99	92.017	Mus_musculus
ENSDORG00000002139	Aptx	99	90.110	MGP_PahariEiJ_G0024020	Aptx	99	83.533	Mus_pahari
ENSDORG00000002139	Aptx	99	91.758	MGP_SPRETEiJ_G0026846	Aptx	97	83.881	Mus_spretus
ENSDORG00000002139	Aptx	100	88.710	ENSMPUG00000004290	APTX	100	84.548	Mustela_putorius_furo
ENSDORG00000002139	Aptx	100	89.529	ENSMLUG00000016081	APTX	97	84.000	Myotis_lucifugus
ENSDORG00000002139	Aptx	100	89.583	ENSNGAG00000016314	Aptx	100	89.583	Nannospalax_galili
ENSDORG00000002139	Aptx	99	61.329	ENSNBRG00000014199	aptx	100	61.329	Neolamprologus_brichardi
ENSDORG00000002139	Aptx	100	90.761	ENSNLEG00000032184	APTX	100	85.714	Nomascus_leucogenys
ENSDORG00000002139	Aptx	99	72.678	ENSMEUG00000004153	APTX	99	63.768	Notamacropus_eugenii
ENSDORG00000002139	Aptx	78	93.233	ENSOPRG00000012403	APTX	96	78.716	Ochotona_princeps
ENSDORG00000002139	Aptx	100	90.217	ENSODEG00000015832	-	100	90.217	Octodon_degus
ENSDORG00000002139	Aptx	100	74.194	ENSODEG00000000097	-	100	74.194	Octodon_degus
ENSDORG00000002139	Aptx	99	61.027	ENSONIG00000014541	aptx	83	61.027	Oreochromis_niloticus
ENSDORG00000002139	Aptx	79	84.746	ENSOANG00000009878	APTX	98	63.158	Ornithorhynchus_anatinus
ENSDORG00000002139	Aptx	99	93.277	ENSOCUG00000025059	-	92	93.407	Oryctolagus_cuniculus
ENSDORG00000002139	Aptx	99	92.857	ENSOCUG00000000738	-	99	88.014	Oryctolagus_cuniculus
ENSDORG00000002139	Aptx	100	70.225	ENSORLG00000006237	aptx	100	57.270	Oryzias_latipes
ENSDORG00000002139	Aptx	100	70.225	ENSORLG00020021478	aptx	100	57.143	Oryzias_latipes_hni
ENSDORG00000002139	Aptx	100	70.950	ENSORLG00015021873	aptx	100	60.182	Oryzias_latipes_hsok
ENSDORG00000002139	Aptx	87	58.389	ENSOMEG00000007875	aptx	81	58.389	Oryzias_melastigma
ENSDORG00000002139	Aptx	100	88.587	ENSOGAG00000005388	APTX	97	82.319	Otolemur_garnettii
ENSDORG00000002139	Aptx	100	90.761	ENSOARG00000009598	APTX	97	84.928	Ovis_aries
ENSDORG00000002139	Aptx	100	91.304	ENSPPAG00000030295	APTX	97	84.593	Pan_paniscus
ENSDORG00000002139	Aptx	100	89.674	ENSPPRG00000017524	APTX	100	83.965	Panthera_pardus
ENSDORG00000002139	Aptx	100	89.674	ENSPTIG00000020000	APTX	100	83.965	Panthera_tigris_altaica
ENSDORG00000002139	Aptx	100	91.304	ENSPTRG00000020850	APTX	100	84.840	Pan_troglodytes
ENSDORG00000002139	Aptx	100	90.761	ENSPANG00000025301	APTX	97	84.884	Papio_anubis
ENSDORG00000002139	Aptx	99	71.823	ENSPKIG00000013601	aptx	99	60.290	Paramormyrops_kingsleyae
ENSDORG00000002139	Aptx	100	77.174	ENSPSIG00000010521	APTX	96	68.222	Pelodiscus_sinensis
ENSDORG00000002139	Aptx	98	69.492	ENSPMGG00000018649	aptx	99	57.227	Periophthalmus_magnuspinnatus
ENSDORG00000002139	Aptx	99	91.597	ENSPEMG00000007747	Aptx	99	91.597	Peromyscus_maniculatus_bairdii
ENSDORG00000002139	Aptx	98	54.749	ENSPMAG00000008417	aptx	98	46.532	Petromyzon_marinus
ENSDORG00000002139	Aptx	100	72.678	ENSPCIG00000029852	APTX	99	65.805	Phascolarctos_cinereus
ENSDORG00000002139	Aptx	99	61.086	ENSPFOG00000005131	-	99	61.086	Poecilia_formosa
ENSDORG00000002139	Aptx	99	60.633	ENSPFOG00000004992	aptx	99	60.633	Poecilia_formosa
ENSDORG00000002139	Aptx	99	61.086	ENSPLAG00000007906	aptx	99	61.086	Poecilia_latipinna
ENSDORG00000002139	Aptx	99	61.086	ENSPLAG00000007960	APTX	99	61.086	Poecilia_latipinna
ENSDORG00000002139	Aptx	99	61.538	ENSPMEG00000018504	aptx	99	61.538	Poecilia_mexicana
ENSDORG00000002139	Aptx	99	61.086	ENSPMEG00000019789	APTX	99	61.086	Poecilia_mexicana
ENSDORG00000002139	Aptx	99	55.352	ENSPREG00000004375	aptx	99	55.352	Poecilia_reticulata
ENSDORG00000002139	Aptx	100	91.304	ENSPPYG00000019142	APTX	97	84.483	Pongo_abelii
ENSDORG00000002139	Aptx	100	89.831	ENSPCAG00000010014	APTX	100	71.137	Procavia_capensis
ENSDORG00000002139	Aptx	100	91.304	ENSPCOG00000016780	APTX	100	86.880	Propithecus_coquereli
ENSDORG00000002139	Aptx	100	86.911	ENSPVAG00000011468	APTX	97	82.558	Pteropus_vampyrus
ENSDORG00000002139	Aptx	99	61.631	ENSPNYG00000007675	aptx	100	61.631	Pundamilia_nyererei
ENSDORG00000002139	Aptx	99	61.611	ENSPNAG00000015984	aptx	99	55.977	Pygocentrus_nattereri
ENSDORG00000002139	Aptx	99	91.758	ENSRNOG00000006582	Aptx	99	83.232	Rattus_norvegicus
ENSDORG00000002139	Aptx	100	89.529	ENSRBIG00000042913	APTX	100	84.257	Rhinopithecus_bieti
ENSDORG00000002139	Aptx	100	89.529	ENSRROG00000035395	APTX	100	84.257	Rhinopithecus_roxellana
ENSDORG00000002139	Aptx	100	90.761	ENSSBOG00000025215	APTX	100	84.840	Saimiri_boliviensis_boliviensis
ENSDORG00000002139	Aptx	98	68.060	ENSSHAG00000012205	APTX	95	68.142	Sarcophilus_harrisii
ENSDORG00000002139	Aptx	99	75.419	ENSSFOG00015009267	aptx	99	61.429	Scleropages_formosus
ENSDORG00000002139	Aptx	99	61.631	ENSSMAG00000008839	aptx	99	61.631	Scophthalmus_maximus
ENSDORG00000002139	Aptx	99	64.186	ENSSDUG00000001989	aptx	99	61.747	Seriola_dumerili
ENSDORG00000002139	Aptx	99	61.290	ENSSLDG00000004915	aptx	99	60.961	Seriola_lalandi_dorsalis
ENSDORG00000002139	Aptx	100	75.956	ENSSPUG00000008994	APTX	87	64.972	Sphenodon_punctatus
ENSDORG00000002139	Aptx	99	65.174	ENSSPAG00000020373	aptx	99	61.377	Stegastes_partitus
ENSDORG00000002139	Aptx	99	90.217	ENSSSCG00000011001	APTX	100	84.257	Sus_scrofa
ENSDORG00000002139	Aptx	100	71.739	ENSTGUG00000001441	APTX	100	61.584	Taeniopygia_guttata
ENSDORG00000002139	Aptx	99	67.232	ENSTRUG00000009794	aptx	99	58.258	Takifugu_rubripes
ENSDORG00000002139	Aptx	99	67.978	ENSTNIG00000010570	aptx	98	59.940	Tetraodon_nigroviridis
ENSDORG00000002139	Aptx	100	90.683	ENSTBEG00000008504	APTX	97	78.261	Tupaia_belangeri
ENSDORG00000002139	Aptx	93	76.656	ENSTTRG00000007384	APTX	97	77.090	Tursiops_truncatus
ENSDORG00000002139	Aptx	99	90.625	ENSUAMG00000003700	APTX	99	83.621	Ursus_americanus
ENSDORG00000002139	Aptx	99	90.110	ENSUMAG00000005837	APTX	99	84.457	Ursus_maritimus
ENSDORG00000002139	Aptx	94	81.395	ENSVPAG00000001297	APTX	99	58.017	Vicugna_pacos
ENSDORG00000002139	Aptx	100	90.217	ENSVVUG00000021130	APTX	100	84.548	Vulpes_vulpes
ENSDORG00000002139	Aptx	98	72.881	ENSXETG00000024143	aptx	99	59.026	Xenopus_tropicalis
ENSDORG00000002139	Aptx	99	69.274	ENSXCOG00000005020	aptx	99	55.367	Xiphophorus_couchianus
ENSDORG00000002139	Aptx	99	69.444	ENSXMAG00000022086	aptx	90	69.444	Xiphophorus_maculatus