EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000002492 (Gene tree)
Gene ID: 105982840
Gene Symbol: Rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 81962 bases
Position: chrKN672363.1:15534829-15616790
Accession: 105982840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000021711	ResIII	PF04851.15	2.3e-11	1	1
ENSDORP00000002339	ResIII	PF04851.15	2.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000029178	-	2628	-	ENSDORP00000021711	875 (aa)	-	UPI000BAD2815
ENSDORT00000002491	-	2915	XM_013012541	ENSDORP00000002339	898 (aa)	XP_012867995	A0A1S3EUA7

Gene Model

Click here to download ENSDORG00000002492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000002492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000002492	Rad54b	70	31.002	ENSDORG00000009270	Smarca1	55	30.573
ENSDORG00000002492	Rad54b	82	40.403	ENSDORG00000002632	Rad54l	94	40.403
ENSDORG00000002492	Rad54b	57	31.434	ENSDORG00000013555	Chd1l	50	31.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000002492	Rad54b	99	85.055	ENSG00000197275	RAD54B	99	85.055	Homo_sapiens
ENSDORG00000002492	Rad54b	83	89.365	ENSG00000265817	FSBP	99	89.365	Homo_sapiens
ENSDORG00000002492	Rad54b	100	82.456	ENSAMEG00000005834	-	100	82.456	Ailuropoda_melanoleuca
ENSDORG00000002492	Rad54b	99	56.054	ENSACIG00000013005	rad54b	99	55.942	Amphilophus_citrinellus
ENSDORG00000002492	Rad54b	99	55.213	ENSAOCG00000008523	rad54b	99	55.258	Amphiprion_ocellaris
ENSDORG00000002492	Rad54b	99	55.906	ENSAPEG00000001673	rad54b	99	55.568	Amphiprion_percula
ENSDORG00000002492	Rad54b	99	56.166	ENSATEG00000001527	rad54b	99	56.004	Anabas_testudineus
ENSDORG00000002492	Rad54b	99	67.939	ENSAPLG00000014366	-	99	67.939	Anas_platyrhynchos
ENSDORG00000002492	Rad54b	91	68.711	ENSACAG00000003671	-	99	68.711	Anolis_carolinensis
ENSDORG00000002492	Rad54b	74	87.654	ENSANAG00000019528	-	99	87.654	Aotus_nancymaae
ENSDORG00000002492	Rad54b	99	55.531	ENSACLG00000007826	rad54b	99	55.518	Astatotilapia_calliptera
ENSDORG00000002492	Rad54b	90	57.037	ENSAMXG00000039985	rad54b	97	56.793	Astyanax_mexicanus
ENSDORG00000002492	Rad54b	100	81.538	ENSBTAG00000000632	RAD54B	100	81.538	Bos_taurus
ENSDORG00000002492	Rad54b	82	35.349	WBGene00013792	Y116A8C.13	98	33.179	Caenorhabditis_elegans
ENSDORG00000002492	Rad54b	99	83.187	ENSCJAG00000000080	-	99	87.569	Callithrix_jacchus
ENSDORG00000002492	Rad54b	100	80.154	ENSCAFG00000009179	RAD54B	99	80.154	Canis_familiaris
ENSDORG00000002492	Rad54b	100	80.044	ENSCAFG00020012084	-	99	80.044	Canis_lupus_dingo
ENSDORG00000002492	Rad54b	100	81.209	ENSCHIG00000008230	-	100	81.209	Capra_hircus
ENSDORG00000002492	Rad54b	100	84.303	ENSTSYG00000013234	-	100	84.303	Carlito_syrichta
ENSDORG00000002492	Rad54b	100	83.002	ENSCPOG00000011643	-	99	83.002	Cavia_porcellus
ENSDORG00000002492	Rad54b	99	83.480	ENSCCAG00000011754	-	99	87.828	Cebus_capucinus
ENSDORG00000002492	Rad54b	99	84.176	ENSCATG00000030661	-	99	88.398	Cercocebus_atys
ENSDORG00000002492	Rad54b	99	83.955	ENSCLAG00000010476	-	99	83.955	Chinchilla_lanigera
ENSDORG00000002492	Rad54b	99	84.176	ENSCSAG00000012712	-	99	84.176	Chlorocebus_sabaeus
ENSDORG00000002492	Rad54b	99	68.266	ENSCPBG00000003204	-	99	68.632	Chrysemys_picta_bellii
ENSDORG00000002492	Rad54b	99	84.176	ENSCANG00000017939	-	99	88.260	Colobus_angolensis_palliatus
ENSDORG00000002492	Rad54b	100	81.060	ENSCGRG00001020184	Rad54b	100	81.017	Cricetulus_griseus_chok1gshd
ENSDORG00000002492	Rad54b	100	79.842	ENSCGRG00000016752	Rad54b	100	79.842	Cricetulus_griseus_crigri
ENSDORG00000002492	Rad54b	99	56.144	ENSCSEG00000001601	rad54b	99	56.236	Cynoglossus_semilaevis
ENSDORG00000002492	Rad54b	99	58.054	ENSCVAG00000009200	rad54b	99	57.978	Cyprinodon_variegatus
ENSDORG00000002492	Rad54b	100	53.958	ENSDARG00000092134	rad54b	100	59.908	Danio_rerio
ENSDORG00000002492	Rad54b	99	80.175	ENSDNOG00000015535	-	99	80.175	Dasypus_novemcinctus
ENSDORG00000002492	Rad54b	86	77.891	ENSETEG00000010605	-	100	77.891	Echinops_telfairi
ENSDORG00000002492	Rad54b	99	46.932	ENSEBUG00000009104	rad54b	98	46.932	Eptatretus_burgeri
ENSDORG00000002492	Rad54b	97	83.200	ENSEASG00005004021	-	99	83.200	Equus_asinus_asinus
ENSDORG00000002492	Rad54b	100	83.077	ENSECAG00000021949	-	99	83.077	Equus_caballus
ENSDORG00000002492	Rad54b	83	86.335	ENSEEUG00000008056	-	83	86.335	Erinaceus_europaeus
ENSDORG00000002492	Rad54b	89	59.367	ENSELUG00000009287	rad54b	99	53.723	Esox_lucius
ENSDORG00000002492	Rad54b	100	82.566	ENSFCAG00000015513	-	99	87.724	Felis_catus
ENSDORG00000002492	Rad54b	99	67.869	ENSFALG00000005467	-	99	67.869	Ficedula_albicollis
ENSDORG00000002492	Rad54b	99	83.040	ENSFDAG00000020541	-	100	83.040	Fukomys_damarensis
ENSDORG00000002492	Rad54b	90	58.772	ENSFHEG00000014382	rad54b	87	58.772	Fundulus_heteroclitus
ENSDORG00000002492	Rad54b	89	57.196	ENSGMOG00000014774	rad54b	98	57.196	Gadus_morhua
ENSDORG00000002492	Rad54b	99	67.285	ENSGALG00000043597	RAD54B	99	67.285	Gallus_gallus
ENSDORG00000002492	Rad54b	99	56.580	ENSGAFG00000007901	rad54b	99	56.580	Gambusia_affinis
ENSDORG00000002492	Rad54b	99	53.739	ENSGACG00000009128	rad54b	99	53.739	Gasterosteus_aculeatus
ENSDORG00000002492	Rad54b	99	68.004	ENSGAGG00000018747	-	99	68.004	Gopherus_agassizii
ENSDORG00000002492	Rad54b	100	84.802	ENSGGOG00000023516	-	100	84.802	Gorilla_gorilla
ENSDORG00000002492	Rad54b	99	54.749	ENSHBUG00000016017	rad54b	99	54.749	Haplochromis_burtoni
ENSDORG00000002492	Rad54b	100	81.987	ENSHGLG00000008263	RAD54B	99	81.987	Heterocephalus_glaber_female
ENSDORG00000002492	Rad54b	100	81.236	ENSHGLG00100008108	-	99	81.236	Heterocephalus_glaber_male
ENSDORG00000002492	Rad54b	99	54.235	ENSHCOG00000004764	rad54b	99	55.623	Hippocampus_comes
ENSDORG00000002492	Rad54b	100	53.115	ENSIPUG00000018531	rad54b	99	52.714	Ictalurus_punctatus
ENSDORG00000002492	Rad54b	99	82.281	ENSSTOG00000010791	-	99	82.281	Ictidomys_tridecemlineatus
ENSDORG00000002492	Rad54b	100	81.319	ENSJJAG00000010314	Rad54b	100	81.319	Jaculus_jaculus
ENSDORG00000002492	Rad54b	99	54.915	ENSKMAG00000004744	rad54b	99	54.915	Kryptolebias_marmoratus
ENSDORG00000002492	Rad54b	83	72.308	ENSLACG00000000859	-	100	69.169	Latimeria_chalumnae
ENSDORG00000002492	Rad54b	99	58.584	ENSLOCG00000010100	rad54b	99	58.584	Lepisosteus_oculatus
ENSDORG00000002492	Rad54b	92	83.313	ENSLAFG00000015315	-	99	83.313	Loxodonta_africana
ENSDORG00000002492	Rad54b	99	84.286	ENSMFAG00000031629	-	99	88.398	Macaca_fascicularis
ENSDORG00000002492	Rad54b	99	84.286	ENSMMUG00000005659	-	99	84.286	Macaca_mulatta
ENSDORG00000002492	Rad54b	99	84.378	ENSMNEG00000016408	-	99	84.378	Macaca_nemestrina
ENSDORG00000002492	Rad54b	99	84.396	ENSMLEG00000006946	-	99	84.396	Mandrillus_leucophaeus
ENSDORG00000002492	Rad54b	99	56.763	ENSMAMG00000012269	rad54b	99	56.541	Mastacembelus_armatus
ENSDORG00000002492	Rad54b	99	54.749	ENSMZEG00005005281	rad54b	95	59.422	Maylandia_zebra
ENSDORG00000002492	Rad54b	99	67.325	ENSMGAG00000012024	-	99	67.325	Meleagris_gallopavo
ENSDORG00000002492	Rad54b	100	79.392	ENSMAUG00000013586	Rad54b	100	79.167	Mesocricetus_auratus
ENSDORG00000002492	Rad54b	99	81.984	ENSMICG00000000754	-	99	82.045	Microcebus_murinus
ENSDORG00000002492	Rad54b	100	78.363	ENSMOCG00000020035	Rad54b	99	78.139	Microtus_ochrogaster
ENSDORG00000002492	Rad54b	99	56.067	ENSMMOG00000003394	rad54b	99	56.067	Mola_mola
ENSDORG00000002492	Rad54b	91	77.597	ENSMODG00000007343	-	99	77.597	Monodelphis_domestica
ENSDORG00000002492	Rad54b	74	60.031	ENSMALG00000001520	rad54b	99	60.031	Monopterus_albus
ENSDORG00000002492	Rad54b	100	79.910	MGP_CAROLIEiJ_G0025810	Rad54b	100	79.686	Mus_caroli
ENSDORG00000002492	Rad54b	100	79.438	ENSMUSG00000078773	Rad54b	100	79.213	Mus_musculus
ENSDORG00000002492	Rad54b	100	79.663	MGP_PahariEiJ_G0023933	Rad54b	100	79.438	Mus_pahari
ENSDORG00000002492	Rad54b	100	80.000	MGP_SPRETEiJ_G0026758	Rad54b	100	79.775	Mus_spretus
ENSDORG00000002492	Rad54b	92	83.995	ENSMPUG00000008878	-	100	84.198	Mustela_putorius_furo
ENSDORG00000002492	Rad54b	99	80.241	ENSMLUG00000008953	-	99	80.241	Myotis_lucifugus
ENSDORG00000002492	Rad54b	100	82.147	ENSNGAG00000017537	Rad54b	100	82.147	Nannospalax_galili
ENSDORG00000002492	Rad54b	99	55.866	ENSNBRG00000013394	rad54b	99	55.968	Neolamprologus_brichardi
ENSDORG00000002492	Rad54b	99	85.055	ENSNLEG00000003062	-	99	89.227	Nomascus_leucogenys
ENSDORG00000002492	Rad54b	73	74.372	ENSMEUG00000012426	-	70	74.615	Notamacropus_eugenii
ENSDORG00000002492	Rad54b	81	85.846	ENSODEG00000002650	-	96	85.538	Octodon_degus
ENSDORG00000002492	Rad54b	100	81.898	ENSODEG00000019564	-	100	81.898	Octodon_degus
ENSDORG00000002492	Rad54b	99	55.390	ENSONIG00000006067	rad54b	99	55.390	Oreochromis_niloticus
ENSDORG00000002492	Rad54b	86	75.432	ENSOANG00000011348	-	100	75.432	Ornithorhynchus_anatinus
ENSDORG00000002492	Rad54b	100	82.308	ENSOCUG00000016478	-	99	82.308	Oryctolagus_cuniculus
ENSDORG00000002492	Rad54b	99	55.367	ENSORLG00000008918	rad54b	99	62.712	Oryzias_latipes
ENSDORG00000002492	Rad54b	74	62.712	ENSORLG00020012171	rad54b	99	62.712	Oryzias_latipes_hni
ENSDORG00000002492	Rad54b	99	55.297	ENSORLG00015018536	rad54b	99	55.297	Oryzias_latipes_hsok
ENSDORG00000002492	Rad54b	88	59.642	ENSOMEG00000004345	rad54b	99	59.642	Oryzias_melastigma
ENSDORG00000002492	Rad54b	99	82.198	ENSOGAG00000007854	-	99	82.198	Otolemur_garnettii
ENSDORG00000002492	Rad54b	92	84.758	ENSOARG00000007691	-	100	84.483	Ovis_aries
ENSDORG00000002492	Rad54b	99	83.407	ENSPPAG00000029572	-	99	83.407	Pan_paniscus
ENSDORG00000002492	Rad54b	100	82.895	ENSPPRG00000007571	-	99	87.724	Panthera_pardus
ENSDORG00000002492	Rad54b	83	87.724	ENSPTIG00000012670	-	99	87.724	Panthera_tigris_altaica
ENSDORG00000002492	Rad54b	99	84.945	ENSPTRG00000020427	-	99	89.227	Pan_troglodytes
ENSDORG00000002492	Rad54b	99	84.396	ENSPANG00000019566	-	99	84.396	Papio_anubis
ENSDORG00000002492	Rad54b	99	58.568	ENSPKIG00000014974	rad54b	99	58.497	Paramormyrops_kingsleyae
ENSDORG00000002492	Rad54b	99	66.594	ENSPSIG00000002383	-	98	72.105	Pelodiscus_sinensis
ENSDORG00000002492	Rad54b	100	80.584	ENSPEMG00000012133	Rad54b	100	80.359	Peromyscus_maniculatus_bairdii
ENSDORG00000002492	Rad54b	90	58.000	ENSPMAG00000002916	rad54b	99	58.375	Petromyzon_marinus
ENSDORG00000002492	Rad54b	91	77.146	ENSPCIG00000020151	-	94	76.375	Phascolarctos_cinereus
ENSDORG00000002492	Rad54b	99	55.710	ENSPFOG00000023411	rad54b	99	55.710	Poecilia_formosa
ENSDORG00000002492	Rad54b	99	55.710	ENSPLAG00000010430	rad54b	99	55.710	Poecilia_latipinna
ENSDORG00000002492	Rad54b	99	57.548	ENSPMEG00000016873	rad54b	99	57.256	Poecilia_mexicana
ENSDORG00000002492	Rad54b	99	57.871	ENSPREG00000018443	rad54b	99	57.871	Poecilia_reticulata
ENSDORG00000002492	Rad54b	99	84.615	ENSPPYG00000018750	-	99	84.615	Pongo_abelii
ENSDORG00000002492	Rad54b	99	84.286	ENSPCOG00000026845	-	99	87.983	Propithecus_coquereli
ENSDORG00000002492	Rad54b	88	85.560	ENSPVAG00000000261	-	92	85.560	Pteropus_vampyrus
ENSDORG00000002492	Rad54b	91	58.509	ENSPNYG00000018303	rad54b	97	58.509	Pundamilia_nyererei
ENSDORG00000002492	Rad54b	99	55.114	ENSPNAG00000000295	rad54b	99	55.000	Pygocentrus_nattereri
ENSDORG00000002492	Rad54b	100	76.404	ENSRNOG00000039949	Rad54b	100	76.067	Rattus_norvegicus
ENSDORG00000002492	Rad54b	99	83.516	ENSRBIG00000020419	-	99	83.516	Rhinopithecus_bieti
ENSDORG00000002492	Rad54b	99	83.516	ENSRROG00000039897	-	99	83.516	Rhinopithecus_roxellana
ENSDORG00000002492	Rad54b	82	37.703	YBR073W	RDH54	61	42.529	Saccharomyces_cerevisiae
ENSDORG00000002492	Rad54b	99	83.407	ENSSBOG00000028501	-	99	83.407	Saimiri_boliviensis_boliviensis
ENSDORG00000002492	Rad54b	99	73.407	ENSSHAG00000017038	-	99	73.407	Sarcophilus_harrisii
ENSDORG00000002492	Rad54b	65	65.789	ENSSFOG00015008483	rad54b	88	65.439	Scleropages_formosus
ENSDORG00000002492	Rad54b	99	56.257	ENSSMAG00000018659	rad54b	99	56.384	Scophthalmus_maximus
ENSDORG00000002492	Rad54b	99	53.651	ENSSDUG00000001122	rad54b	98	54.410	Seriola_dumerili
ENSDORG00000002492	Rad54b	99	52.520	ENSSLDG00000013787	rad54b	99	54.709	Seriola_lalandi_dorsalis
ENSDORG00000002492	Rad54b	99	69.379	ENSSPUG00000016497	-	99	69.379	Sphenodon_punctatus
ENSDORG00000002492	Rad54b	99	56.793	ENSSPAG00000012800	rad54b	99	56.711	Stegastes_partitus
ENSDORG00000002492	Rad54b	99	81.465	ENSSSCG00000006101	-	99	85.194	Sus_scrofa
ENSDORG00000002492	Rad54b	99	66.958	ENSTGUG00000011880	-	99	66.958	Taeniopygia_guttata
ENSDORG00000002492	Rad54b	99	54.114	ENSTRUG00000010015	rad54b	99	54.584	Takifugu_rubripes
ENSDORG00000002492	Rad54b	100	78.352	ENSTTRG00000006312	-	100	78.352	Tursiops_truncatus
ENSDORG00000002492	Rad54b	100	82.785	ENSUMAG00000016401	-	100	82.785	Ursus_maritimus
ENSDORG00000002492	Rad54b	100	81.429	ENSVPAG00000003157	-	100	81.429	Vicugna_pacos
ENSDORG00000002492	Rad54b	99	54.384	ENSXETG00000025924	rad54b	99	57.947	Xenopus_tropicalis
ENSDORG00000002492	Rad54b	99	56.742	ENSXMAG00000013141	rad54b	99	56.566	Xiphophorus_maculatus