EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000002538 (Gene tree)
Gene ID: 105999096
Gene Symbol: Elavl3
Alias: 2600009P04Rik|Huc|mHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 7909 bases
Position: chrKN672526.1:1333865-1341773
Accession: 105999096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000025838	RRM_5	PF13893.6	6.8e-14	1	2
ENSDORP00000025838	RRM_5	PF13893.6	6.8e-14	2	2
ENSDORP00000002384	RRM_5	PF13893.6	7.1e-14	1	2
ENSDORP00000002384	RRM_5	PF13893.6	7.1e-14	2	2
ENSDORP00000025838	RRM_1	PF00076.22	6.5e-65	1	3
ENSDORP00000025838	RRM_1	PF00076.22	6.5e-65	2	3
ENSDORP00000025838	RRM_1	PF00076.22	6.5e-65	3	3
ENSDORP00000002384	RRM_1	PF00076.22	6.8e-65	1	3
ENSDORP00000002384	RRM_1	PF00076.22	6.8e-65	2	3
ENSDORP00000002384	RRM_1	PF00076.22	6.8e-65	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000033700	-	1086	-	ENSDORP00000025838	361 (aa)	-	UPI000BAD02C7
ENSDORT00000002538	-	1095	XM_013033998	ENSDORP00000002384	364 (aa)	XP_012889452	UPI000BAD2A92

Gene Model

Click here to download ENSDORG00000002538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000002538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000002538	Elavl3	90	37.179	ENSDORG00000010683	Tial1	73	37.179
ENSDORG00000002538	Elavl3	91	35.366	ENSDORG00000004882	Celf6	98	34.940
ENSDORG00000002538	Elavl3	63	37.500	ENSDORG00000023540	Cirbp	51	37.500
ENSDORG00000002538	Elavl3	90	37.179	ENSDORG00000008601	Tia1	83	37.179
ENSDORG00000002538	Elavl3	71	40.741	ENSDORG00000007169	Celf4	67	41.026
ENSDORG00000002538	Elavl3	91	67.470	ENSDORG00000009158	Elavl1	95	67.692
ENSDORG00000002538	Elavl3	76	40.741	ENSDORG00000006455	Celf2	59	41.026
ENSDORG00000002538	Elavl3	100	80.645	ENSDORG00000012729	Elavl4	99	80.161
ENSDORG00000002538	Elavl3	64	37.356	ENSDORG00000007103	Rbms1	53	35.484
ENSDORG00000002538	Elavl3	69	33.708	ENSDORG00000015481	-	90	33.333
ENSDORG00000002538	Elavl3	71	42.391	ENSDORG00000013721	Celf1	53	43.590
ENSDORG00000002538	Elavl3	89	36.486	ENSDORG00000004926	-	63	36.486
ENSDORG00000002538	Elavl3	91	32.530	ENSDORG00000001067	Pabpc1l	61	32.530
ENSDORG00000002538	Elavl3	92	33.735	ENSDORG00000011581	Pabpc4	59	33.735
ENSDORG00000002538	Elavl3	92	36.145	ENSDORG00000013935	Pabpc1	63	36.145
ENSDORG00000002538	Elavl3	100	79.570	ENSDORG00000010437	Elavl2	98	78.763
ENSDORG00000002538	Elavl3	70	41.975	ENSDORG00000002488	Celf3	53	42.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000002538	Elavl3	100	98.901	ENSG00000196361	ELAVL3	99	98.901	Homo_sapiens
ENSDORG00000002538	Elavl3	99	85.434	ENSAPOG00000017565	elavl3	99	84.314	Acanthochromis_polyacanthus
ENSDORG00000002538	Elavl3	100	95.330	ENSAMEG00000010487	ELAVL3	99	95.330	Ailuropoda_melanoleuca
ENSDORG00000002538	Elavl3	99	85.434	ENSACIG00000024190	elavl3	99	84.314	Amphilophus_citrinellus
ENSDORG00000002538	Elavl3	99	87.328	ENSAOCG00000005054	elavl3	99	86.226	Amphiprion_ocellaris
ENSDORG00000002538	Elavl3	99	87.328	ENSAPEG00000011145	elavl3	99	86.226	Amphiprion_percula
ENSDORG00000002538	Elavl3	98	86.080	ENSATEG00000020941	elavl3	99	84.943	Anabas_testudineus
ENSDORG00000002538	Elavl3	99	89.227	ENSACAG00000016958	ELAVL3	93	88.122	Anolis_carolinensis
ENSDORG00000002538	Elavl3	99	96.970	ENSANAG00000030798	ELAVL3	99	96.970	Aotus_nancymaae
ENSDORG00000002538	Elavl3	99	85.393	ENSACLG00000018260	elavl3	99	84.270	Astatotilapia_calliptera
ENSDORG00000002538	Elavl3	99	88.154	ENSAMXG00000040498	elavl3	99	87.052	Astyanax_mexicanus
ENSDORG00000002538	Elavl3	100	96.429	ENSBTAG00000014412	ELAVL3	99	96.429	Bos_taurus
ENSDORG00000002538	Elavl3	100	98.901	ENSCJAG00000005589	ELAVL3	99	98.901	Callithrix_jacchus
ENSDORG00000002538	Elavl3	100	98.626	ENSCAFG00000017350	ELAVL3	99	98.626	Canis_familiaris
ENSDORG00000002538	Elavl3	100	96.703	ENSCAFG00020004614	ELAVL3	99	97.260	Canis_lupus_dingo
ENSDORG00000002538	Elavl3	100	98.352	ENSCHIG00000003436	ELAVL3	100	98.352	Capra_hircus
ENSDORG00000002538	Elavl3	100	98.901	ENSTSYG00000036621	ELAVL3	99	98.901	Carlito_syrichta
ENSDORG00000002538	Elavl3	90	82.716	ENSCAPG00000017620	ELAVL3	99	82.716	Cavia_aperea
ENSDORG00000002538	Elavl3	90	82.716	ENSCPOG00000001793	ELAVL3	99	82.716	Cavia_porcellus
ENSDORG00000002538	Elavl3	100	98.901	ENSCCAG00000034350	ELAVL3	99	98.901	Cebus_capucinus
ENSDORG00000002538	Elavl3	100	98.901	ENSCATG00000044086	ELAVL3	99	98.901	Cercocebus_atys
ENSDORG00000002538	Elavl3	100	98.901	ENSCLAG00000016404	ELAVL3	100	98.901	Chinchilla_lanigera
ENSDORG00000002538	Elavl3	87	98.261	ENSCSAG00000006755	ELAVL3	100	98.261	Chlorocebus_sabaeus
ENSDORG00000002538	Elavl3	100	86.575	ENSCPBG00000023982	ELAVL3	99	85.479	Chrysemys_picta_bellii
ENSDORG00000002538	Elavl3	100	98.901	ENSCANG00000038728	ELAVL3	99	98.901	Colobus_angolensis_palliatus
ENSDORG00000002538	Elavl3	100	98.626	ENSCGRG00001018927	Elavl3	99	98.626	Cricetulus_griseus_chok1gshd
ENSDORG00000002538	Elavl3	100	98.626	ENSCGRG00000007158	Elavl3	99	98.626	Cricetulus_griseus_crigri
ENSDORG00000002538	Elavl3	98	85.352	ENSCSEG00000021095	elavl3	99	84.225	Cynoglossus_semilaevis
ENSDORG00000002538	Elavl3	99	87.328	ENSCVAG00000014060	elavl3	99	86.226	Cyprinodon_variegatus
ENSDORG00000002538	Elavl3	99	87.603	ENSDARG00000014420	elavl3	99	86.501	Danio_rerio
ENSDORG00000002538	Elavl3	52	99.237	ENSETEG00000000164	-	57	99.237	Echinops_telfairi
ENSDORG00000002538	Elavl3	100	98.626	ENSEASG00005004561	ELAVL3	99	98.626	Equus_asinus_asinus
ENSDORG00000002538	Elavl3	100	98.082	ENSECAG00000020594	ELAVL3	99	98.082	Equus_caballus
ENSDORG00000002538	Elavl3	100	85.440	ENSELUG00000023043	elavl3	99	85.154	Esox_lucius
ENSDORG00000002538	Elavl3	100	98.626	ENSFCAG00000024763	ELAVL3	99	98.626	Felis_catus
ENSDORG00000002538	Elavl3	99	88.796	ENSFDAG00000008449	ELAVL3	99	88.796	Fukomys_damarensis
ENSDORG00000002538	Elavl3	99	85.393	ENSFHEG00000001675	elavl3	99	84.270	Fundulus_heteroclitus
ENSDORG00000002538	Elavl3	99	87.603	ENSGMOG00000003760	elavl3	99	86.501	Gadus_morhua
ENSDORG00000002538	Elavl3	61	75.591	ENSGALG00000047364	-	100	75.591	Gallus_gallus
ENSDORG00000002538	Elavl3	99	87.328	ENSGAFG00000016015	elavl3	98	86.226	Gambusia_affinis
ENSDORG00000002538	Elavl3	99	87.328	ENSGACG00000013839	elavl3	99	86.226	Gasterosteus_aculeatus
ENSDORG00000002538	Elavl3	94	89.712	ENSGAGG00000016141	ELAVL3	99	89.712	Gopherus_agassizii
ENSDORG00000002538	Elavl3	100	98.901	ENSGGOG00000008635	ELAVL3	100	98.901	Gorilla_gorilla
ENSDORG00000002538	Elavl3	99	85.955	ENSHBUG00000020978	elavl3	99	84.831	Haplochromis_burtoni
ENSDORG00000002538	Elavl3	85	68.506	ENSHGLG00000019379	-	97	68.506	Heterocephalus_glaber_female
ENSDORG00000002538	Elavl3	100	98.901	ENSHGLG00000015199	ELAVL3	99	98.901	Heterocephalus_glaber_female
ENSDORG00000002538	Elavl3	98	97.688	ENSHGLG00100011200	ELAVL3	99	97.688	Heterocephalus_glaber_male
ENSDORG00000002538	Elavl3	100	87.637	ENSHCOG00000015894	elavl3	99	87.052	Hippocampus_comes
ENSDORG00000002538	Elavl3	99	85.393	ENSIPUG00000013002	elavl3	98	84.270	Ictalurus_punctatus
ENSDORG00000002538	Elavl3	100	98.901	ENSSTOG00000021111	ELAVL3	99	98.901	Ictidomys_tridecemlineatus
ENSDORG00000002538	Elavl3	100	98.077	ENSJJAG00000023513	Elavl3	100	98.077	Jaculus_jaculus
ENSDORG00000002538	Elavl3	99	85.434	ENSKMAG00000017412	elavl3	99	84.314	Kryptolebias_marmoratus
ENSDORG00000002538	Elavl3	99	85.434	ENSLBEG00000008073	elavl3	98	84.314	Labrus_bergylta
ENSDORG00000002538	Elavl3	99	88.154	ENSLOCG00000007647	elavl3	99	87.052	Lepisosteus_oculatus
ENSDORG00000002538	Elavl3	100	98.356	ENSLAFG00000005013	ELAVL3	99	98.356	Loxodonta_africana
ENSDORG00000002538	Elavl3	100	98.901	ENSMFAG00000003692	ELAVL3	99	98.901	Macaca_fascicularis
ENSDORG00000002538	Elavl3	100	98.901	ENSMMUG00000020616	ELAVL3	99	98.901	Macaca_mulatta
ENSDORG00000002538	Elavl3	100	98.626	ENSMNEG00000043973	ELAVL3	99	98.626	Macaca_nemestrina
ENSDORG00000002538	Elavl3	88	91.393	ENSMLEG00000013976	ELAVL3	99	91.393	Mandrillus_leucophaeus
ENSDORG00000002538	Elavl3	99	85.112	ENSMAMG00000011697	elavl3	99	83.989	Mastacembelus_armatus
ENSDORG00000002538	Elavl3	99	87.328	ENSMZEG00005019053	elavl3	99	86.226	Maylandia_zebra
ENSDORG00000002538	Elavl3	100	98.626	ENSMAUG00000016478	Elavl3	100	98.626	Mesocricetus_auratus
ENSDORG00000002538	Elavl3	100	98.901	ENSMICG00000016528	ELAVL3	100	98.901	Microcebus_murinus
ENSDORG00000002538	Elavl3	100	98.626	ENSMOCG00000002046	Elavl3	99	98.626	Microtus_ochrogaster
ENSDORG00000002538	Elavl3	99	84.722	ENSMMOG00000012154	elavl3	99	83.611	Mola_mola
ENSDORG00000002538	Elavl3	100	89.560	ENSMODG00000006653	ELAVL3	92	89.560	Monodelphis_domestica
ENSDORG00000002538	Elavl3	100	87.363	ENSMALG00000016659	elavl3	99	86.264	Monopterus_albus
ENSDORG00000002538	Elavl3	100	98.626	MGP_CAROLIEiJ_G0031894	Elavl3	99	98.626	Mus_caroli
ENSDORG00000002538	Elavl3	100	98.626	ENSMUSG00000003410	Elavl3	99	98.626	Mus_musculus
ENSDORG00000002538	Elavl3	100	98.352	MGP_PahariEiJ_G0014760	Elavl3	99	98.352	Mus_pahari
ENSDORG00000002538	Elavl3	50	93.913	MGP_SPRETEiJ_G0033017	-	51	93.913	Mus_spretus
ENSDORG00000002538	Elavl3	100	98.901	ENSMPUG00000005040	ELAVL3	99	98.901	Mustela_putorius_furo
ENSDORG00000002538	Elavl3	100	98.082	ENSMLUG00000016320	ELAVL3	99	98.082	Myotis_lucifugus
ENSDORG00000002538	Elavl3	100	98.901	ENSNGAG00000000968	Elavl3	99	98.901	Nannospalax_galili
ENSDORG00000002538	Elavl3	100	87.363	ENSNBRG00000010319	elavl3	99	86.264	Neolamprologus_brichardi
ENSDORG00000002538	Elavl3	100	93.681	ENSMEUG00000016706	ELAVL3	100	93.681	Notamacropus_eugenii
ENSDORG00000002538	Elavl3	92	97.166	ENSOPRG00000007373	ELAVL3	100	97.166	Ochotona_princeps
ENSDORG00000002538	Elavl3	100	98.901	ENSODEG00000015790	ELAVL3	99	98.901	Octodon_degus
ENSDORG00000002538	Elavl3	100	87.363	ENSONIG00000001538	elavl3	99	86.264	Oreochromis_niloticus
ENSDORG00000002538	Elavl3	89	91.700	ENSOANG00000015046	ELAVL3	98	90.119	Ornithorhynchus_anatinus
ENSDORG00000002538	Elavl3	99	87.328	ENSORLG00000005379	elavl3	99	86.226	Oryzias_latipes
ENSDORG00000002538	Elavl3	99	87.328	ENSORLG00020004570	elavl3	99	86.226	Oryzias_latipes_hni
ENSDORG00000002538	Elavl3	99	88.022	ENSORLG00015000662	elavl3	98	86.908	Oryzias_latipes_hsok
ENSDORG00000002538	Elavl3	99	85.393	ENSOMEG00000023959	elavl3	99	84.270	Oryzias_melastigma
ENSDORG00000002538	Elavl3	100	98.901	ENSOGAG00000007072	ELAVL3	99	98.901	Otolemur_garnettii
ENSDORG00000002538	Elavl3	100	98.352	ENSOARG00000018464	ELAVL3	99	98.352	Ovis_aries
ENSDORG00000002538	Elavl3	100	98.901	ENSPPAG00000033972	ELAVL3	99	98.901	Pan_paniscus
ENSDORG00000002538	Elavl3	100	98.626	ENSPPRG00000005151	ELAVL3	99	98.626	Panthera_pardus
ENSDORG00000002538	Elavl3	98	94.477	ENSPTIG00000013610	ELAVL3	97	94.477	Panthera_tigris_altaica
ENSDORG00000002538	Elavl3	100	98.901	ENSPTRG00000010506	ELAVL3	99	98.901	Pan_troglodytes
ENSDORG00000002538	Elavl3	100	98.901	ENSPANG00000005849	ELAVL3	99	98.901	Papio_anubis
ENSDORG00000002538	Elavl3	100	87.637	ENSPKIG00000016207	elavl3	99	86.538	Paramormyrops_kingsleyae
ENSDORG00000002538	Elavl3	99	85.393	ENSPMGG00000002016	elavl3	99	84.270	Periophthalmus_magnuspinnatus
ENSDORG00000002538	Elavl3	99	83.554	ENSPFOG00000007754	elavl3	100	82.493	Poecilia_formosa
ENSDORG00000002538	Elavl3	98	86.080	ENSPLAG00000001547	elavl3	99	84.943	Poecilia_latipinna
ENSDORG00000002538	Elavl3	98	86.080	ENSPMEG00000010156	elavl3	99	84.943	Poecilia_mexicana
ENSDORG00000002538	Elavl3	99	87.328	ENSPREG00000006971	elavl3	99	86.226	Poecilia_reticulata
ENSDORG00000002538	Elavl3	85	85.366	ENSPPYG00000009583	-	98	85.366	Pongo_abelii
ENSDORG00000002538	Elavl3	84	100.000	ENSPCAG00000015952	ELAVL3	65	100.000	Procavia_capensis
ENSDORG00000002538	Elavl3	100	98.901	ENSPCOG00000023781	ELAVL3	99	98.901	Propithecus_coquereli
ENSDORG00000002538	Elavl3	100	98.626	ENSPVAG00000014893	ELAVL3	99	98.626	Pteropus_vampyrus
ENSDORG00000002538	Elavl3	99	85.393	ENSPNYG00000013186	elavl3	97	84.270	Pundamilia_nyererei
ENSDORG00000002538	Elavl3	99	88.154	ENSPNAG00000003633	elavl3	99	87.052	Pygocentrus_nattereri
ENSDORG00000002538	Elavl3	100	98.626	ENSRNOG00000013752	Elavl3	99	98.626	Rattus_norvegicus
ENSDORG00000002538	Elavl3	100	98.901	ENSRBIG00000034762	ELAVL3	99	98.901	Rhinopithecus_bieti
ENSDORG00000002538	Elavl3	90	94.141	ENSRROG00000034305	ELAVL3	95	100.000	Rhinopithecus_roxellana
ENSDORG00000002538	Elavl3	100	98.901	ENSSBOG00000030047	ELAVL3	100	98.901	Saimiri_boliviensis_boliviensis
ENSDORG00000002538	Elavl3	87	93.913	ENSSHAG00000005583	ELAVL3	100	93.913	Sarcophilus_harrisii
ENSDORG00000002538	Elavl3	94	87.172	ENSSFOG00015023630	elavl3	99	86.006	Scleropages_formosus
ENSDORG00000002538	Elavl3	99	85.112	ENSSMAG00000004671	elavl3	99	83.989	Scophthalmus_maximus
ENSDORG00000002538	Elavl3	99	85.434	ENSSDUG00000020708	elavl3	99	84.314	Seriola_dumerili
ENSDORG00000002538	Elavl3	99	87.879	ENSSLDG00000013769	elavl3	99	86.777	Seriola_lalandi_dorsalis
ENSDORG00000002538	Elavl3	100	88.767	ENSSARG00000005949	ELAVL3	100	88.767	Sorex_araneus
ENSDORG00000002538	Elavl3	99	85.434	ENSSPAG00000000990	elavl3	99	84.314	Stegastes_partitus
ENSDORG00000002538	Elavl3	100	98.626	ENSSSCG00000013617	ELAVL3	99	98.626	Sus_scrofa
ENSDORG00000002538	Elavl3	98	86.080	ENSTRUG00000010719	elavl3	99	84.943	Takifugu_rubripes
ENSDORG00000002538	Elavl3	100	86.649	ENSTNIG00000018572	elavl3	99	85.559	Tetraodon_nigroviridis
ENSDORG00000002538	Elavl3	98	94.190	ENSTBEG00000006133	ELAVL3	100	94.190	Tupaia_belangeri
ENSDORG00000002538	Elavl3	100	98.352	ENSTTRG00000001789	ELAVL3	99	98.352	Tursiops_truncatus
ENSDORG00000002538	Elavl3	100	95.055	ENSUAMG00000000405	ELAVL3	98	95.055	Ursus_americanus
ENSDORG00000002538	Elavl3	98	94.098	ENSUMAG00000019546	ELAVL3	87	94.098	Ursus_maritimus
ENSDORG00000002538	Elavl3	100	96.703	ENSVVUG00000023733	ELAVL3	99	96.703	Vulpes_vulpes
ENSDORG00000002538	Elavl3	100	86.649	ENSXETG00000016741	elavl3	99	85.559	Xenopus_tropicalis
ENSDORG00000002538	Elavl3	99	85.393	ENSXMAG00000018287	elavl3	99	84.270	Xiphophorus_maculatus