EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSDORG00000002544 (Gene tree)
Gene ID
105999059
Gene Symbol
Smarca4
Alias
Brg1|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Dipodomys_ordii
Status
putative
Strand
Plus strand
Length
64067 bases
Position
chrKN672526.1:1021207-1085273
Accession
105999059
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDORP00000024842BRKPF07533.161.1e-1711
ENSDORP00000002392BRKPF07533.161.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDORT00000002546-4542XM_013033946ENSDORP000000023921513 (aa)XP_012889400UPI000BACEEA0
ENSDORT00000026361-4383-ENSDORP000000248421460 (aa)-UPI000BAD072F
Gene Model
Click here to download ENSDORG00000002544's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000002544's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDORG00000002544Smarca48871.289ENSDORG00000014832Smarca27678.506
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDORG00000002544Smarca49192.704ENSG00000127616SMARCA49499.543Homo_sapiens
ENSDORG00000002544Smarca47180.093ENSAPOG00000003509smarca4a7982.888Acanthochromis_polyacanthus
ENSDORG00000002544Smarca49178.837ENSAPOG00000004542SMARCA48978.414Acanthochromis_polyacanthus
ENSDORG00000002544Smarca49190.418ENSAMEG00000010868SMARCA48389.986Ailuropoda_melanoleuca
ENSDORG00000002544Smarca49280.912ENSACIG00000021550smarca4a8481.936Amphilophus_citrinellus
ENSDORG00000002544Smarca49181.691ENSAOCG00000009450-8981.733Amphiprion_ocellaris
ENSDORG00000002544Smarca49279.465ENSAOCG00000019167smarca4a9580.865Amphiprion_ocellaris
ENSDORG00000002544Smarca49178.307ENSAPEG00000023108-8678.345Amphiprion_percula
ENSDORG00000002544Smarca49279.537ENSAPEG00000015559smarca4a9580.938Amphiprion_percula
ENSDORG00000002544Smarca49579.253ENSATEG00000011524smarca4a8482.140Anabas_testudineus
ENSDORG00000002544Smarca49179.007ENSATEG00000001094-8286.697Anabas_testudineus
ENSDORG00000002544Smarca49192.574ENSANAG00000036991SMARCA48393.885Aotus_nancymaae
ENSDORG00000002544Smarca49381.357ENSACLG00000000163smarca4a8582.068Astatotilapia_calliptera
ENSDORG00000002544Smarca49178.888ENSACLG00000008638-8878.363Astatotilapia_calliptera
ENSDORG00000002544Smarca49275.417ENSAMXG00000021023smarca4a7084.418Astyanax_mexicanus
ENSDORG00000002544Smarca49182.127ENSAMXG00000011238-9578.386Astyanax_mexicanus
ENSDORG00000002544Smarca49191.968ENSBTAG00000019220SMARCA48590.639Bos_taurus
ENSDORG00000002544Smarca48993.813ENSCJAG00000005936SMARCA48393.813Callithrix_jacchus
ENSDORG00000002544Smarca49192.704ENSCAFG00000017584SMARCA48591.655Canis_familiaris
ENSDORG00000002544Smarca493100.000ENSCAFG00020024620SMARCA48492.178Canis_lupus_dingo
ENSDORG00000002544Smarca49186.790ENSCHIG00000015318SMARCA48585.964Capra_hircus
ENSDORG00000002544Smarca493100.000ENSTSYG00000012966SMARCA48492.426Carlito_syrichta
ENSDORG00000002544Smarca49182.093ENSCAPG00000015932SMARCA48789.990Cavia_aperea
ENSDORG00000002544Smarca49192.410ENSCPOG00000015549SMARCA48889.875Cavia_porcellus
ENSDORG00000002544Smarca49190.306ENSCCAG00000031660SMARCA48489.280Cebus_capucinus
ENSDORG00000002544Smarca492100.000ENSCATG00000029530SMARCA48393.885Cercocebus_atys
ENSDORG00000002544Smarca49191.820ENSCLAG00000011946SMARCA48590.639Chinchilla_lanigera
ENSDORG00000002544Smarca49190.943ENSCPBG00000009994SMARCA48490.943Chrysemys_picta_bellii
ENSDORG00000002544Smarca492100.000ENSCANG00000036013SMARCA48393.813Colobus_angolensis_palliatus
ENSDORG00000002544Smarca49192.483ENSCGRG00001016732Smarca48591.437Cricetulus_griseus_chok1gshd
ENSDORG00000002544Smarca49192.483ENSCGRG00000017242Smarca48791.437Cricetulus_griseus_crigri
ENSDORG00000002544Smarca49179.233ENSCSEG00000014771smarca4a8582.009Cynoglossus_semilaevis
ENSDORG00000002544Smarca49379.690ENSCVAG00000006979smarca4a8581.476Cyprinodon_variegatus
ENSDORG00000002544Smarca49182.474ENSCVAG00000003018-8782.016Cyprinodon_variegatus
ENSDORG00000002544Smarca49281.766ENSDARG00000077226smarca4a8581.980Danio_rerio
ENSDORG00000002544Smarca49079.222ENSDARG00000104339SMARCA48481.381Danio_rerio
ENSDORG00000002544Smarca49183.310ENSDNOG00000048847SMARCA47590.874Dasypus_novemcinctus
ENSDORG00000002544Smarca48982.040ENSETEG00000013361SMARCA48480.029Echinops_telfairi
ENSDORG00000002544Smarca486100.000ENSEASG00005006167SMARCA48491.509Equus_asinus_asinus
ENSDORG00000002544Smarca49192.631ENSECAG00000008334SMARCA48691.582Equus_caballus
ENSDORG00000002544Smarca49172.822ENSELUG00000023232-8281.760Esox_lucius
ENSDORG00000002544Smarca49579.014ENSELUG00000010247smarca4a8381.131Esox_lucius
ENSDORG00000002544Smarca49192.710ENSFCAG00000004894SMARCA48492.710Felis_catus
ENSDORG00000002544Smarca46894.187ENSFALG00000004208SMARCA48485.160Ficedula_albicollis
ENSDORG00000002544Smarca49191.838ENSFDAG00000012237SMARCA48991.838Fukomys_damarensis
ENSDORG00000002544Smarca49277.601ENSFHEG00000010182smarca4a9086.741Fundulus_heteroclitus
ENSDORG00000002544Smarca49179.901ENSFHEG00000007902-8679.054Fundulus_heteroclitus
ENSDORG00000002544Smarca48480.262ENSGMOG00000005756-7379.062Gadus_morhua
ENSDORG00000002544Smarca48093.651ENSGMOG00000002649smarca4a7091.892Gadus_morhua
ENSDORG00000002544Smarca47989.002ENSGALG00000047145SMARCA410088.917Gallus_gallus
ENSDORG00000002544Smarca49177.350ENSGAFG00000008827-8476.788Gambusia_affinis
ENSDORG00000002544Smarca48285.243ENSGAFG00000014900smarca4a8185.773Gambusia_affinis
ENSDORG00000002544Smarca49079.283ENSGACG00000006691smarca4a8480.144Gasterosteus_aculeatus
ENSDORG00000002544Smarca49277.535ENSGACG00000016033-8575.964Gasterosteus_aculeatus
ENSDORG00000002544Smarca49190.936ENSGAGG00000016757SMARCA48589.913Gopherus_agassizii
ENSDORG00000002544Smarca49192.704ENSGGOG00000009882SMARCA48393.885Gorilla_gorilla
ENSDORG00000002544Smarca49381.701ENSHBUG00000021172smarca4a8482.417Haplochromis_burtoni
ENSDORG00000002544Smarca49179.504ENSHBUG00000005447-8679.106Haplochromis_burtoni
ENSDORG00000002544Smarca49191.997ENSHGLG00000010519SMARCA48492.144Heterocephalus_glaber_female
ENSDORG00000002544Smarca49292.025ENSHGLG00100013774SMARCA48891.591Heterocephalus_glaber_male
ENSDORG00000002544Smarca49578.177ENSHCOG00000009510smarca4a8581.200Hippocampus_comes
ENSDORG00000002544Smarca49182.574ENSIPUG00000006107smarca4a8880.044Ictalurus_punctatus
ENSDORG00000002544Smarca49080.251ENSIPUG00000016346-8379.013Ictalurus_punctatus
ENSDORG00000002544Smarca49192.704ENSSTOG00000007939SMARCA48591.655Ictidomys_tridecemlineatus
ENSDORG00000002544Smarca48993.525ENSJJAG00000012877Smarca48491.631Jaculus_jaculus
ENSDORG00000002544Smarca49280.189ENSKMAG00000011931smarca4a8481.898Kryptolebias_marmoratus
ENSDORG00000002544Smarca49182.405ENSKMAG00000019518-8881.779Kryptolebias_marmoratus
ENSDORG00000002544Smarca49478.895ENSLBEG00000017383smarca4a6686.750Labrus_bergylta
ENSDORG00000002544Smarca48966.955ENSLBEG00000020655-6974.795Labrus_bergylta
ENSDORG00000002544Smarca45681.981ENSLACG00000015309SMARCA410082.297Latimeria_chalumnae
ENSDORG00000002544Smarca49181.678ENSLOCG00000007820smarca4a6487.269Lepisosteus_oculatus
ENSDORG00000002544Smarca493100.000ENSLAFG00000001433SMARCA48492.636Loxodonta_africana
ENSDORG00000002544Smarca492100.000ENSMFAG00000032146SMARCA48393.885Macaca_fascicularis
ENSDORG00000002544Smarca49192.704ENSMMUG00000012042SMARCA48393.885Macaca_mulatta
ENSDORG00000002544Smarca492100.000ENSMNEG00000028512SMARCA48393.597Macaca_nemestrina
ENSDORG00000002544Smarca492100.000ENSMLEG00000034976SMARCA48393.813Mandrillus_leucophaeus
ENSDORG00000002544Smarca49579.480ENSMAMG00000009256smarca4a8482.225Mastacembelus_armatus
ENSDORG00000002544Smarca49181.738ENSMAMG00000002841-8881.232Mastacembelus_armatus
ENSDORG00000002544Smarca49181.484ENSMZEG00005023861-8879.106Maylandia_zebra
ENSDORG00000002544Smarca49381.429ENSMZEG00005003889smarca4a8482.140Maylandia_zebra
ENSDORG00000002544Smarca49192.342ENSMAUG00000020731Smarca48492.342Mesocricetus_auratus
ENSDORG00000002544Smarca49192.636ENSMICG00000009806SMARCA48393.826Microcebus_murinus
ENSDORG00000002544Smarca49192.342ENSMOCG00000022209Smarca48492.342Microtus_ochrogaster
ENSDORG00000002544Smarca49478.771ENSMMOG00000007571smarca4a8881.069Mola_mola
ENSDORG00000002544Smarca48992.734ENSMODG00000006287SMARCA48490.837Monodelphis_domestica
ENSDORG00000002544Smarca49178.529ENSMALG00000021534-7886.661Monopterus_albus
ENSDORG00000002544Smarca49180.205ENSMALG00000003388smarca4a8482.832Monopterus_albus
ENSDORG00000002544Smarca49192.778MGP_CAROLIEiJ_G0031879Smarca49991.653Mus_caroli
ENSDORG00000002544Smarca49192.778ENSMUSG00000032187Smarca49991.653Mus_musculus
ENSDORG00000002544Smarca49192.189MGP_PahariEiJ_G0014745Smarca49990.859Mus_pahari
ENSDORG00000002544Smarca49192.778MGP_SPRETEiJ_G0033003Smarca49991.653Mus_spretus
ENSDORG00000002544Smarca49192.631ENSMPUG00000005711SMARCA48591.582Mustela_putorius_furo
ENSDORG00000002544Smarca49192.631ENSMLUG00000004491-8591.582Myotis_lucifugus
ENSDORG00000002544Smarca49191.894ENSNGAG00000021852Smarca48590.711Nannospalax_galili
ENSDORG00000002544Smarca49280.000ENSNBRG00000011457smarca4a8680.513Neolamprologus_brichardi
ENSDORG00000002544Smarca493100.000ENSNLEG00000012389SMARCA48790.276Nomascus_leucogenys
ENSDORG00000002544Smarca48377.739ENSOPRG00000000885-7292.135Ochotona_princeps
ENSDORG00000002544Smarca49188.613ENSODEG00000017127SMARCA46992.105Octodon_degus
ENSDORG00000002544Smarca49481.037ENSONIG00000008196smarca4a8483.260Oreochromis_niloticus
ENSDORG00000002544Smarca49179.787ENSONIG00000018040-8679.175Oreochromis_niloticus
ENSDORG00000002544Smarca49586.156ENSOCUG00000001787SMARCA48684.554Oryctolagus_cuniculus
ENSDORG00000002544Smarca48779.010ENSORLG00000003955-9283.287Oryzias_latipes
ENSDORG00000002544Smarca48780.924ENSORLG00000015452smarca4a8480.246Oryzias_latipes
ENSDORG00000002544Smarca49179.188ENSORLG00020004611smarca4a8480.246Oryzias_latipes_hni
ENSDORG00000002544Smarca48779.025ENSORLG00020009728-9283.486Oryzias_latipes_hni
ENSDORG00000002544Smarca48780.696ENSORLG00015016560smarca4a9876.265Oryzias_latipes_hsok
ENSDORG00000002544Smarca49178.430ENSORLG00015007739-9183.196Oryzias_latipes_hsok
ENSDORG00000002544Smarca48779.084ENSOMEG00000016626-8678.437Oryzias_melastigma
ENSDORG00000002544Smarca49181.277ENSOMEG00000007486smarca4a8481.390Oryzias_melastigma
ENSDORG00000002544Smarca49190.058ENSOGAG00000016148SMARCA49689.500Otolemur_garnettii
ENSDORG00000002544Smarca49191.532ENSOARG00000017454SMARCA48490.547Ovis_aries
ENSDORG00000002544Smarca492100.000ENSPPAG00000043191SMARCA48393.885Pan_paniscus
ENSDORG00000002544Smarca49192.710ENSPPRG00000000064SMARCA48492.710Panthera_pardus
ENSDORG00000002544Smarca492100.000ENSPTRG00000010488SMARCA48393.885Pan_troglodytes
ENSDORG00000002544Smarca492100.000ENSPANG00000011042SMARCA48493.741Papio_anubis
ENSDORG00000002544Smarca48783.000ENSPKIG00000010087-8481.236Paramormyrops_kingsleyae
ENSDORG00000002544Smarca49183.008ENSPKIG00000007770SMARCA48581.980Paramormyrops_kingsleyae
ENSDORG00000002544Smarca48986.566ENSPSIG00000005547SMARCA48485.014Pelodiscus_sinensis
ENSDORG00000002544Smarca49192.489ENSPEMG00000020389Smarca48492.489Peromyscus_maniculatus_bairdii
ENSDORG00000002544Smarca49191.894ENSPCIG00000017138SMARCA48590.856Phascolarctos_cinereus
ENSDORG00000002544Smarca49279.460ENSPFOG00000007892smarca4a8481.602Poecilia_formosa
ENSDORG00000002544Smarca49179.152ENSPFOG00000012930-8678.681Poecilia_formosa
ENSDORG00000002544Smarca47488.359ENSPLAG00000018616-6887.626Poecilia_latipinna
ENSDORG00000002544Smarca49279.531ENSPLAG00000014294smarca4a8285.714Poecilia_latipinna
ENSDORG00000002544Smarca49279.531ENSPMEG00000003725smarca4a8681.674Poecilia_mexicana
ENSDORG00000002544Smarca49179.971ENSPMEG00000008929-8779.313Poecilia_mexicana
ENSDORG00000002544Smarca48985.765ENSPREG00000014608smarca4a8581.198Poecilia_reticulata
ENSDORG00000002544Smarca48684.442ENSPREG00000014823-8778.750Poecilia_reticulata
ENSDORG00000002544Smarca48993.813ENSPPYG00000009568SMARCA48491.919Pongo_abelii
ENSDORG00000002544Smarca47579.148ENSPCAG00000014054SMARCA46879.148Procavia_capensis
ENSDORG00000002544Smarca49192.557ENSPCOG00000023011SMARCA48492.489Propithecus_coquereli
ENSDORG00000002544Smarca48399.351ENSPVAG00000007787SMARCA48199.351Pteropus_vampyrus
ENSDORG00000002544Smarca49579.668ENSPNYG00000000717smarca4a8582.344Pundamilia_nyererei
ENSDORG00000002544Smarca49181.634ENSPNAG00000006636-8786.972Pygocentrus_nattereri
ENSDORG00000002544Smarca48587.429ENSPNAG00000024136smarca4a8586.162Pygocentrus_nattereri
ENSDORG00000002544Smarca49192.631ENSRNOG00000009271Smarca48591.582Rattus_norvegicus
ENSDORG00000002544Smarca492100.000ENSRBIG00000038696SMARCA48393.741Rhinopithecus_bieti
ENSDORG00000002544Smarca492100.000ENSRROG00000045509SMARCA48393.813Rhinopithecus_roxellana
ENSDORG00000002544Smarca49192.704ENSSBOG00000026896SMARCA48393.885Saimiri_boliviensis_boliviensis
ENSDORG00000002544Smarca49191.894ENSSHAG00000001642SMARCA48590.856Sarcophilus_harrisii
ENSDORG00000002544Smarca48287.671ENSSFOG00015009921-7887.306Scleropages_formosus
ENSDORG00000002544Smarca49183.960ENSSFOG00015013823smarca48581.437Scleropages_formosus
ENSDORG00000002544Smarca49579.590ENSSMAG00000003200smarca4a8480.186Scophthalmus_maximus
ENSDORG00000002544Smarca49177.557ENSSMAG00000014082-8576.752Scophthalmus_maximus
ENSDORG00000002544Smarca49575.157ENSSDUG00000017298smarca4a8477.988Seriola_dumerili
ENSDORG00000002544Smarca49181.522ENSSDUG00000005388-8978.547Seriola_dumerili
ENSDORG00000002544Smarca49578.919ENSSLDG00000024486smarca4a9481.154Seriola_lalandi_dorsalis
ENSDORG00000002544Smarca49182.106ENSSLDG00000023663-8781.871Seriola_lalandi_dorsalis
ENSDORG00000002544Smarca452100.000ENSSARG00000013477SMARCA464100.000Sorex_araneus
ENSDORG00000002544Smarca49185.881ENSSPUG00000004558SMARCA48884.798Sphenodon_punctatus
ENSDORG00000002544Smarca49179.529ENSSPAG00000012533-8678.207Stegastes_partitus
ENSDORG00000002544Smarca49578.303ENSSPAG00000004248smarca4a8480.718Stegastes_partitus
ENSDORG00000002544Smarca49192.710ENSSSCG00000013629SMARCA48492.710Sus_scrofa
ENSDORG00000002544Smarca45492.248ENSTGUG00000015488-9492.248Taeniopygia_guttata
ENSDORG00000002544Smarca49176.573ENSTRUG00000004885smarca4a9576.662Takifugu_rubripes
ENSDORG00000002544Smarca49177.865ENSTRUG00000001378SMARCA48877.458Takifugu_rubripes
ENSDORG00000002544Smarca49179.913ENSTNIG00000004536SMARCA48680.129Tetraodon_nigroviridis
ENSDORG00000002544Smarca47192.405ENSTNIG00000004859-8991.824Tetraodon_nigroviridis
ENSDORG00000002544Smarca454100.000ENSTBEG00000000707-53100.000Tupaia_belangeri
ENSDORG00000002544Smarca48993.381ENSTTRG00000009519SMARCA48094.981Tursiops_truncatus
ENSDORG00000002544Smarca49192.704ENSUAMG00000014661SMARCA48591.655Ursus_americanus
ENSDORG00000002544Smarca492100.000ENSUMAG00000022005SMARCA48591.230Ursus_maritimus
ENSDORG00000002544Smarca492100.000ENSVVUG00000017820SMARCA48391.655Vulpes_vulpes
ENSDORG00000002544Smarca49380.563ENSXETG00000009355smarca49980.550Xenopus_tropicalis
ENSDORG00000002544Smarca49179.886ENSXMAG00000007030-8679.065Xiphophorus_maculatus
ENSDORG00000002544Smarca49280.357ENSXMAG00000006321smarca4a9479.971Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us