EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000002632 (Gene tree)
Gene ID: 105986165
Gene Symbol: Rad54l
Alias: RAD54
Full Name: RAD54 like
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 21136 bases
Position: chrKN672379.1:7337737-7358872
Accession: 105986165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000027261	ResIII	PF04851.15	6.2e-07	1	1
ENSDORP00000002476	ResIII	PF04851.15	6.2e-07	1	1
ENSDORP00000002476	DEAD	PF00270.29	2e-06	1	1
ENSDORP00000027261	DEAD	PF00270.29	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000002634	-	2163	-	ENSDORP00000002476	720 (aa)	-	UPI000BAD2720
ENSDORT00000029969	-	2214	XM_013016953	ENSDORP00000027261	737 (aa)	XP_012872407	UPI000BACF9A3

Gene Model

Click here to download ENSDORG00000002632's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000002632's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000002632	Rad54l	94	40.403	ENSDORG00000002492	Rad54b	82	40.403
ENSDORG00000002632	Rad54l	69	30.989	ENSDORG00000013555	Chd1l	51	30.409

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000002632	Rad54l	100	83.641	ENSG00000085999	RAD54L	100	97.333	Homo_sapiens
ENSDORG00000002632	Rad54l	99	70.080	ENSAPOG00000011643	rad54l	99	69.947	Acanthochromis_polyacanthus
ENSDORG00000002632	Rad54l	99	82.982	ENSAMEG00000013902	RAD54L	99	82.850	Ailuropoda_melanoleuca
ENSDORG00000002632	Rad54l	99	70.292	ENSACIG00000001939	rad54l	99	70.159	Amphilophus_citrinellus
ENSDORG00000002632	Rad54l	99	73.005	ENSAOCG00000017576	rad54l	99	72.872	Amphiprion_ocellaris
ENSDORG00000002632	Rad54l	90	76.652	ENSAPEG00000020658	rad54l	93	76.505	Amphiprion_percula
ENSDORG00000002632	Rad54l	91	76.754	ENSATEG00000006767	rad54l	96	76.608	Anabas_testudineus
ENSDORG00000002632	Rad54l	92	79.622	ENSAPLG00000006389	RAD54L	97	79.565	Anas_platyrhynchos
ENSDORG00000002632	Rad54l	99	76.790	ENSACAG00000002312	RAD54L	99	76.769	Anolis_carolinensis
ENSDORG00000002632	Rad54l	100	83.905	ENSANAG00000035439	RAD54L	100	83.798	Aotus_nancymaae
ENSDORG00000002632	Rad54l	99	70.241	ENSACLG00000018711	rad54l	99	70.241	Astatotilapia_calliptera
ENSDORG00000002632	Rad54l	99	72.606	ENSAMXG00000012777	rad54l	99	72.583	Astyanax_mexicanus
ENSDORG00000002632	Rad54l	99	84.169	ENSBTAG00000019901	RAD54L	99	83.931	Bos_taurus
ENSDORG00000002632	Rad54l	90	54.815	WBGene00004298	rad-54	82	54.815	Caenorhabditis_elegans
ENSDORG00000002632	Rad54l	99	81.028	ENSCJAG00000021080	RAD54L	95	80.902	Callithrix_jacchus
ENSDORG00000002632	Rad54l	99	82.740	ENSCAFG00000004272	RAD54L	99	82.609	Canis_familiaris
ENSDORG00000002632	Rad54l	99	82.718	ENSCAFG00020015066	RAD54L	99	82.586	Canis_lupus_dingo
ENSDORG00000002632	Rad54l	99	83.752	ENSCHIG00000020118	RAD54L	99	83.511	Capra_hircus
ENSDORG00000002632	Rad54l	100	83.990	ENSTSYG00000002032	RAD54L	100	83.990	Carlito_syrichta
ENSDORG00000002632	Rad54l	99	84.148	ENSCPOG00000006768	RAD54L	99	84.148	Cavia_porcellus
ENSDORG00000002632	Rad54l	100	84.433	ENSCCAG00000025783	RAD54L	100	84.329	Cebus_capucinus
ENSDORG00000002632	Rad54l	100	84.037	ENSCATG00000030589	RAD54L	100	83.773	Cercocebus_atys
ENSDORG00000002632	Rad54l	99	84.605	ENSCLAG00000004645	RAD54L	99	84.605	Chinchilla_lanigera
ENSDORG00000002632	Rad54l	100	83.905	ENSCSAG00000001229	RAD54L	100	83.641	Chlorocebus_sabaeus
ENSDORG00000002632	Rad54l	99	78.238	ENSCPBG00000005675	RAD54L	99	78.238	Chrysemys_picta_bellii
ENSDORG00000002632	Rad54l	99	58.203	ENSCING00000024456	-	99	58.140	Ciona_intestinalis
ENSDORG00000002632	Rad54l	99	57.588	ENSCSAVG00000010859	-	99	57.124	Ciona_savignyi
ENSDORG00000002632	Rad54l	100	83.905	ENSCANG00000034891	RAD54L	100	83.773	Colobus_angolensis_palliatus
ENSDORG00000002632	Rad54l	99	83.641	ENSCGRG00001014807	Rad54l	99	83.641	Cricetulus_griseus_chok1gshd
ENSDORG00000002632	Rad54l	99	83.641	ENSCGRG00000016038	Rad54l	99	83.641	Cricetulus_griseus_crigri
ENSDORG00000002632	Rad54l	99	72.533	ENSCSEG00000001983	rad54l	99	72.400	Cynoglossus_semilaevis
ENSDORG00000002632	Rad54l	74	82.213	ENSCVAG00000019561	rad54l	96	82.213	Cyprinodon_variegatus
ENSDORG00000002632	Rad54l	99	72.354	ENSDARG00000018623	rad54l	99	72.222	Danio_rerio
ENSDORG00000002632	Rad54l	99	82.781	ENSDNOG00000003395	RAD54L	99	82.781	Dasypus_novemcinctus
ENSDORG00000002632	Rad54l	99	52.203	FBgn0002989	okr	95	52.203	Drosophila_melanogaster
ENSDORG00000002632	Rad54l	77	94.309	ENSETEG00000000550	RAD54L	78	94.309	Echinops_telfairi
ENSDORG00000002632	Rad54l	99	83.578	ENSEASG00005004511	RAD54L	96	87.964	Equus_asinus_asinus
ENSDORG00000002632	Rad54l	99	83.733	ENSECAG00000008760	RAD54L	99	83.733	Equus_caballus
ENSDORG00000002632	Rad54l	99	81.963	ENSEEUG00000008113	RAD54L	99	81.565	Erinaceus_europaeus
ENSDORG00000002632	Rad54l	99	72.655	ENSELUG00000002295	rad54l	99	72.391	Esox_lucius
ENSDORG00000002632	Rad54l	99	82.695	ENSFCAG00000003444	RAD54L	99	82.299	Felis_catus
ENSDORG00000002632	Rad54l	99	76.502	ENSFALG00000009480	RAD54L	99	76.502	Ficedula_albicollis
ENSDORG00000002632	Rad54l	100	84.100	ENSFDAG00000007806	RAD54L	100	84.100	Fukomys_damarensis
ENSDORG00000002632	Rad54l	59	68.009	ENSFHEG00000009824	rad54l	76	67.785	Fundulus_heteroclitus
ENSDORG00000002632	Rad54l	99	71.070	ENSGMOG00000014568	rad54l	99	70.938	Gadus_morhua
ENSDORG00000002632	Rad54l	99	76.698	ENSGALG00000010356	RAD54L	92	76.658	Gallus_gallus
ENSDORG00000002632	Rad54l	91	71.366	ENSGAFG00000011110	rad54l	100	71.221	Gambusia_affinis
ENSDORG00000002632	Rad54l	99	72.222	ENSGACG00000003111	rad54l	97	72.170	Gasterosteus_aculeatus
ENSDORG00000002632	Rad54l	99	77.941	ENSGAGG00000014089	RAD54L	96	77.941	Gopherus_agassizii
ENSDORG00000002632	Rad54l	100	83.509	ENSGGOG00000010602	RAD54L	100	83.377	Gorilla_gorilla
ENSDORG00000002632	Rad54l	99	70.509	ENSHBUG00000007793	rad54l	99	70.509	Haplochromis_burtoni
ENSDORG00000002632	Rad54l	100	83.770	ENSHGLG00000000753	RAD54L	100	83.770	Heterocephalus_glaber_female
ENSDORG00000002632	Rad54l	100	83.639	ENSHGLG00100016987	RAD54L	100	83.639	Heterocephalus_glaber_male
ENSDORG00000002632	Rad54l	99	70.861	ENSIPUG00000015999	rad54l	97	75.439	Ictalurus_punctatus
ENSDORG00000002632	Rad54l	99	84.342	ENSSTOG00000029125	RAD54L	99	84.342	Ictidomys_tridecemlineatus
ENSDORG00000002632	Rad54l	99	73.649	ENSJJAG00000000235	-	99	73.514	Jaculus_jaculus
ENSDORG00000002632	Rad54l	99	71.580	ENSKMAG00000009944	rad54l	99	71.448	Kryptolebias_marmoratus
ENSDORG00000002632	Rad54l	99	72.776	ENSLBEG00000014617	rad54l	97	76.686	Labrus_bergylta
ENSDORG00000002632	Rad54l	99	73.775	ENSLOCG00000004144	rad54l	100	74.671	Lepisosteus_oculatus
ENSDORG00000002632	Rad54l	99	84.820	ENSLAFG00000007583	RAD54L	99	84.820	Loxodonta_africana
ENSDORG00000002632	Rad54l	99	83.884	ENSMFAG00000031241	RAD54L	99	83.620	Macaca_fascicularis
ENSDORG00000002632	Rad54l	99	83.884	ENSMMUG00000011568	RAD54L	99	83.620	Macaca_mulatta
ENSDORG00000002632	Rad54l	99	84.513	ENSMNEG00000038562	RAD54L	99	84.379	Macaca_nemestrina
ENSDORG00000002632	Rad54l	100	83.905	ENSMLEG00000038145	RAD54L	100	83.773	Mandrillus_leucophaeus
ENSDORG00000002632	Rad54l	99	72.069	ENSMAMG00000022180	rad54l	99	76.316	Mastacembelus_armatus
ENSDORG00000002632	Rad54l	99	70.107	ENSMZEG00005018081	rad54l	99	70.107	Maylandia_zebra
ENSDORG00000002632	Rad54l	99	76.800	ENSMGAG00000010634	RAD54L	99	76.760	Meleagris_gallopavo
ENSDORG00000002632	Rad54l	99	83.773	ENSMAUG00000020076	Rad54l	99	83.773	Mesocricetus_auratus
ENSDORG00000002632	Rad54l	99	84.412	ENSMICG00000003266	RAD54L	99	84.016	Microcebus_murinus
ENSDORG00000002632	Rad54l	99	84.037	ENSMOCG00000001778	Rad54l	99	84.037	Microtus_ochrogaster
ENSDORG00000002632	Rad54l	99	69.878	ENSMALG00000021148	rad54l	99	69.878	Monopterus_albus
ENSDORG00000002632	Rad54l	99	80.545	MGP_CAROLIEiJ_G0026325	Rad54l	99	80.545	Mus_caroli
ENSDORG00000002632	Rad54l	99	84.808	ENSMUSG00000028702	Rad54l	99	84.808	Mus_musculus
ENSDORG00000002632	Rad54l	99	84.127	MGP_PahariEiJ_G0028657	Rad54l	99	84.127	Mus_pahari
ENSDORG00000002632	Rad54l	99	84.941	MGP_SPRETEiJ_G0027297	Rad54l	99	84.941	Mus_spretus
ENSDORG00000002632	Rad54l	99	82.891	ENSMPUG00000012883	RAD54L	99	82.891	Mustela_putorius_furo
ENSDORG00000002632	Rad54l	99	84.016	ENSMLUG00000003763	RAD54L	99	83.884	Myotis_lucifugus
ENSDORG00000002632	Rad54l	99	83.487	ENSNGAG00000024213	Rad54l	99	83.487	Nannospalax_galili
ENSDORG00000002632	Rad54l	100	83.113	ENSNLEG00000016548	RAD54L	100	82.982	Nomascus_leucogenys
ENSDORG00000002632	Rad54l	84	85.053	ENSMEUG00000006793	RAD54L	99	77.193	Notamacropus_eugenii
ENSDORG00000002632	Rad54l	88	95.122	ENSOPRG00000016016	RAD54L	87	95.122	Ochotona_princeps
ENSDORG00000002632	Rad54l	100	84.494	ENSODEG00000008519	RAD54L	99	84.494	Octodon_degus
ENSDORG00000002632	Rad54l	99	70.133	ENSONIG00000007659	rad54l	99	70.133	Oreochromis_niloticus
ENSDORG00000002632	Rad54l	99	84.280	ENSOCUG00000005229	RAD54L	99	83.910	Oryctolagus_cuniculus
ENSDORG00000002632	Rad54l	99	72.400	ENSORLG00000002958	rad54l	99	72.090	Oryzias_latipes
ENSDORG00000002632	Rad54l	99	72.090	ENSORLG00020006554	rad54l	99	76.720	Oryzias_latipes_hni
ENSDORG00000002632	Rad54l	99	72.267	ENSORLG00015002907	rad54l	99	72.090	Oryzias_latipes_hsok
ENSDORG00000002632	Rad54l	99	72.487	ENSOMEG00000007770	rad54l	99	72.487	Oryzias_melastigma
ENSDORG00000002632	Rad54l	99	83.663	ENSOARG00000002264	RAD54L	99	83.422	Ovis_aries
ENSDORG00000002632	Rad54l	100	83.509	ENSPPAG00000031222	RAD54L	100	83.377	Pan_paniscus
ENSDORG00000002632	Rad54l	99	82.695	ENSPPRG00000010317	RAD54L	99	82.299	Panthera_pardus
ENSDORG00000002632	Rad54l	99	82.695	ENSPTIG00000012200	RAD54L	99	82.299	Panthera_tigris_altaica
ENSDORG00000002632	Rad54l	100	83.509	ENSPTRG00000000689	RAD54L	100	83.377	Pan_troglodytes
ENSDORG00000002632	Rad54l	100	83.905	ENSPANG00000016295	RAD54L	100	83.773	Papio_anubis
ENSDORG00000002632	Rad54l	99	69.867	ENSPKIG00000016172	rad54l	99	69.733	Paramormyrops_kingsleyae
ENSDORG00000002632	Rad54l	99	78.290	ENSPSIG00000003258	RAD54L	99	78.378	Pelodiscus_sinensis
ENSDORG00000002632	Rad54l	99	68.717	ENSPMGG00000016335	rad54l	99	68.717	Periophthalmus_magnuspinnatus
ENSDORG00000002632	Rad54l	99	85.306	ENSPEMG00000011422	Rad54l	99	85.306	Peromyscus_maniculatus_bairdii
ENSDORG00000002632	Rad54l	99	64.690	ENSPMAG00000007719	rad54l	99	64.954	Petromyzon_marinus
ENSDORG00000002632	Rad54l	99	77.807	ENSPCIG00000029032	RAD54L	99	77.807	Phascolarctos_cinereus
ENSDORG00000002632	Rad54l	83	75.120	ENSPFOG00000013732	rad54l	97	74.960	Poecilia_formosa
ENSDORG00000002632	Rad54l	81	73.515	ENSPLAG00000023416	rad54l	99	73.355	Poecilia_latipinna
ENSDORG00000002632	Rad54l	91	71.948	ENSPMEG00000008299	rad54l	100	71.802	Poecilia_mexicana
ENSDORG00000002632	Rad54l	99	71.258	ENSPREG00000019955	rad54l	99	71.126	Poecilia_reticulata
ENSDORG00000002632	Rad54l	93	86.667	ENSPPYG00000001398	RAD54L	99	86.667	Pongo_abelii
ENSDORG00000002632	Rad54l	77	93.204	ENSPCAG00000005323	RAD54L	77	93.204	Procavia_capensis
ENSDORG00000002632	Rad54l	99	84.544	ENSPCOG00000015423	RAD54L	99	84.280	Propithecus_coquereli
ENSDORG00000002632	Rad54l	99	68.700	ENSPNYG00000002942	rad54l	99	68.700	Pundamilia_nyererei
ENSDORG00000002632	Rad54l	99	72.450	ENSPNAG00000012483	rad54l	99	72.318	Pygocentrus_nattereri
ENSDORG00000002632	Rad54l	99	84.148	ENSRNOG00000013148	Rad54l	99	84.148	Rattus_norvegicus
ENSDORG00000002632	Rad54l	100	83.905	ENSRBIG00000043495	RAD54L	100	83.773	Rhinopithecus_bieti
ENSDORG00000002632	Rad54l	100	84.037	ENSRROG00000020844	RAD54L	100	83.905	Rhinopithecus_roxellana
ENSDORG00000002632	Rad54l	79	46.678	YGL163C	RAD54	66	47.176	Saccharomyces_cerevisiae
ENSDORG00000002632	Rad54l	100	84.433	ENSSBOG00000024672	RAD54L	100	84.329	Saimiri_boliviensis_boliviensis
ENSDORG00000002632	Rad54l	99	78.468	ENSSHAG00000000110	RAD54L	99	78.336	Sarcophilus_harrisii
ENSDORG00000002632	Rad54l	99	72.667	ENSSDUG00000019147	rad54l	99	72.667	Seriola_dumerili
ENSDORG00000002632	Rad54l	99	72.800	ENSSLDG00000012330	rad54l	99	72.800	Seriola_lalandi_dorsalis
ENSDORG00000002632	Rad54l	83	80.190	ENSSARG00000006689	RAD54L	100	80.190	Sorex_araneus
ENSDORG00000002632	Rad54l	99	72.340	ENSSPAG00000011016	rad54l	99	72.340	Stegastes_partitus
ENSDORG00000002632	Rad54l	100	84.462	ENSSSCG00000003905	RAD54L	100	84.462	Sus_scrofa
ENSDORG00000002632	Rad54l	99	75.434	ENSTGUG00000008233	RAD54L	99	75.567	Taeniopygia_guttata
ENSDORG00000002632	Rad54l	99	70.588	ENSTRUG00000008410	rad54l	99	70.706	Takifugu_rubripes
ENSDORG00000002632	Rad54l	99	69.426	ENSTNIG00000004716	rad54l	99	70.040	Tetraodon_nigroviridis
ENSDORG00000002632	Rad54l	99	81.358	ENSTTRG00000006315	RAD54L	99	81.233	Tursiops_truncatus
ENSDORG00000002632	Rad54l	99	82.626	ENSUAMG00000011824	RAD54L	99	82.493	Ursus_americanus
ENSDORG00000002632	Rad54l	99	81.300	ENSUMAG00000023603	RAD54L	99	81.167	Ursus_maritimus
ENSDORG00000002632	Rad54l	99	82.740	ENSVVUG00000007201	RAD54L	99	82.609	Vulpes_vulpes
ENSDORG00000002632	Rad54l	92	75.771	ENSXETG00000004369	rad54l	95	76.308	Xenopus_tropicalis
ENSDORG00000002632	Rad54l	55	62.350	ENSXCOG00000016028	rad54l	84	62.110	Xiphophorus_couchianus