EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000002726 (Gene tree)
Gene ID: 105998110
Gene Symbol: Zc3h4
Alias: -
Full Name: zinc finger CCCH-type containing 4
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 31315 bases
Position: chrKN672502.1:294927-326241
Accession: 105998110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000018000	zf-CCCH	PF00642.24	2.6e-13	1	1
ENSDORP00000019183	zf-CCCH	PF00642.24	3.2e-13	1	1
ENSDORP00000002561	zf-CCCH	PF00642.24	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000002726	-	3909	XM_013032729	ENSDORP00000002561	1302 (aa)	XP_012888183	UPI000BAD27EC
ENSDORT00000035706	-	4548	XM_013032730	ENSDORP00000018000	1176 (aa)	XP_012888184	A0A1S3GJK0
ENSDORT00000023211	-	4736	XM_013032731	ENSDORP00000019183	1252 (aa)	XP_012888185	A0A1S3GHK3

Gene Model

Click here to download ENSDORG00000002726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000002726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000002726	Zc3h4	99	32.308	ENSDORG00000013967	Zc3h6	57	49.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000002726	Zc3h4	98	87.328	ENSG00000130749	ZC3H4	99	88.171	Homo_sapiens
ENSDORG00000002726	Zc3h4	98	72.588	ENSACAG00000003986	ZC3H4	76	63.707	Anolis_carolinensis
ENSDORG00000002726	Zc3h4	98	85.484	ENSANAG00000023963	ZC3H4	97	84.851	Aotus_nancymaae
ENSDORG00000002726	Zc3h4	73	50.049	ENSAMXG00000009037	zc3h4	57	61.572	Astyanax_mexicanus
ENSDORG00000002726	Zc3h4	98	87.167	ENSBTAG00000009286	ZC3H4	97	87.786	Bos_taurus
ENSDORG00000002726	Zc3h4	98	88.432	ENSCJAG00000011601	ZC3H4	97	83.464	Callithrix_jacchus
ENSDORG00000002726	Zc3h4	98	83.692	ENSCAFG00000004182	ZC3H4	97	82.864	Canis_familiaris
ENSDORG00000002726	Zc3h4	98	85.460	ENSCHIG00000013956	ZC3H4	95	86.914	Capra_hircus
ENSDORG00000002726	Zc3h4	90	86.726	ENSTSYG00000000926	ZC3H4	94	85.988	Carlito_syrichta
ENSDORG00000002726	Zc3h4	98	87.651	ENSCCAG00000037597	ZC3H4	97	86.253	Cebus_capucinus
ENSDORG00000002726	Zc3h4	98	86.683	ENSCATG00000039046	ZC3H4	97	87.274	Cercocebus_atys
ENSDORG00000002726	Zc3h4	94	90.719	ENSCLAG00000001032	ZC3H4	100	88.863	Chinchilla_lanigera
ENSDORG00000002726	Zc3h4	98	87.167	ENSCSAG00000002989	ZC3H4	98	88.297	Chlorocebus_sabaeus
ENSDORG00000002726	Zc3h4	80	87.549	ENSCGRG00001016116	Zc3h4	99	83.235	Cricetulus_griseus_chok1gshd
ENSDORG00000002726	Zc3h4	98	87.462	ENSDNOG00000003764	ZC3H4	97	84.211	Dasypus_novemcinctus
ENSDORG00000002726	Zc3h4	82	96.591	ENSETEG00000005763	ZC3H4	77	96.552	Echinops_telfairi
ENSDORG00000002726	Zc3h4	98	87.813	ENSECAG00000024342	ZC3H4	99	89.266	Equus_caballus
ENSDORG00000002726	Zc3h4	81	79.762	ENSEEUG00000000519	ZC3H4	74	77.671	Erinaceus_europaeus
ENSDORG00000002726	Zc3h4	100	86.198	ENSFCAG00000004835	ZC3H4	97	86.399	Felis_catus
ENSDORG00000002726	Zc3h4	98	69.541	ENSGAGG00000019319	ZC3H4	98	68.750	Gopherus_agassizii
ENSDORG00000002726	Zc3h4	98	87.490	ENSGGOG00000013071	ZC3H4	97	88.217	Gorilla_gorilla
ENSDORG00000002726	Zc3h4	90	94.737	ENSSTOG00000016249	ZC3H4	83	84.283	Ictidomys_tridecemlineatus
ENSDORG00000002726	Zc3h4	98	85.516	ENSJJAG00000019068	Zc3h4	100	83.914	Jaculus_jaculus
ENSDORG00000002726	Zc3h4	98	85.266	ENSLAFG00000001586	ZC3H4	97	86.207	Loxodonta_africana
ENSDORG00000002726	Zc3h4	98	87.248	ENSMFAG00000041518	ZC3H4	97	87.903	Macaca_fascicularis
ENSDORG00000002726	Zc3h4	98	87.167	ENSMLEG00000007946	ZC3H4	99	88.297	Mandrillus_leucophaeus
ENSDORG00000002726	Zc3h4	100	85.375	ENSMAUG00000000068	Zc3h4	100	83.162	Mesocricetus_auratus
ENSDORG00000002726	Zc3h4	98	87.177	ENSMICG00000008786	ZC3H4	97	86.656	Microcebus_murinus
ENSDORG00000002726	Zc3h4	91	76.684	ENSMODG00000008978	ZC3H4	94	76.778	Monodelphis_domestica
ENSDORG00000002726	Zc3h4	100	85.455	ENSMUSG00000059273	Zc3h4	100	83.320	Mus_musculus
ENSDORG00000002726	Zc3h4	100	85.669	MGP_PahariEiJ_G0021089	Zc3h4	100	83.426	Mus_pahari
ENSDORG00000002726	Zc3h4	100	84.500	MGP_SPRETEiJ_G0030312	Zc3h4	100	82.506	Mus_spretus
ENSDORG00000002726	Zc3h4	100	87.530	ENSNGAG00000020090	Zc3h4	100	87.074	Nannospalax_galili
ENSDORG00000002726	Zc3h4	80	76.963	ENSMEUG00000009167	ZC3H4	76	88.222	Notamacropus_eugenii
ENSDORG00000002726	Zc3h4	93	85.471	ENSOPRG00000014889	ZC3H4	90	86.637	Ochotona_princeps
ENSDORG00000002726	Zc3h4	100	86.804	ENSODEG00000008320	ZC3H4	100	88.633	Octodon_degus
ENSDORG00000002726	Zc3h4	94	63.514	ENSOANG00000001794	ZC3H4	51	76.506	Ornithorhynchus_anatinus
ENSDORG00000002726	Zc3h4	96	83.920	ENSOCUG00000026069	ZC3H4	92	92.073	Oryctolagus_cuniculus
ENSDORG00000002726	Zc3h4	98	86.613	ENSOGAG00000031123	ZC3H4	97	87.834	Otolemur_garnettii
ENSDORG00000002726	Zc3h4	94	80.000	ENSOARG00000010932	ZC3H4	76	87.277	Ovis_aries
ENSDORG00000002726	Zc3h4	98	84.572	ENSPPRG00000023272	ZC3H4	95	84.653	Panthera_pardus
ENSDORG00000002726	Zc3h4	86	77.375	ENSPTIG00000014229	ZC3H4	67	85.153	Panthera_tigris_altaica
ENSDORG00000002726	Zc3h4	98	87.167	ENSPTRG00000011201	ZC3H4	97	87.903	Pan_troglodytes
ENSDORG00000002726	Zc3h4	98	87.490	ENSPANG00000021115	ZC3H4	97	88.217	Papio_anubis
ENSDORG00000002726	Zc3h4	98	69.502	ENSPSIG00000002241	ZC3H4	98	69.249	Pelodiscus_sinensis
ENSDORG00000002726	Zc3h4	100	87.924	ENSPEMG00000009762	Zc3h4	100	86.324	Peromyscus_maniculatus_bairdii
ENSDORG00000002726	Zc3h4	93	89.508	ENSPPYG00000010167	ZC3H4	98	89.931	Pongo_abelii
ENSDORG00000002726	Zc3h4	73	85.158	ENSPCAG00000014919	ZC3H4	97	87.053	Procavia_capensis
ENSDORG00000002726	Zc3h4	98	87.419	ENSPCOG00000017169	ZC3H4	97	88.540	Propithecus_coquereli
ENSDORG00000002726	Zc3h4	94	83.531	ENSPVAG00000005687	ZC3H4	89	83.261	Pteropus_vampyrus
ENSDORG00000002726	Zc3h4	98	84.165	ENSRNOG00000015229	Zc3h4	98	82.186	Rattus_norvegicus
ENSDORG00000002726	Zc3h4	98	86.037	ENSRROG00000032920	ZC3H4	97	86.881	Rhinopithecus_roxellana
ENSDORG00000002726	Zc3h4	92	87.802	ENSSBOG00000030914	ZC3H4	99	87.265	Saimiri_boliviensis_boliviensis
ENSDORG00000002726	Zc3h4	84	85.987	ENSSARG00000014146	ZC3H4	70	87.261	Sorex_araneus
ENSDORG00000002726	Zc3h4	84	83.216	ENSSSCG00000003110	ZC3H4	80	89.519	Sus_scrofa
ENSDORG00000002726	Zc3h4	100	84.043	ENSVVUG00000000208	ZC3H4	98	84.708	Vulpes_vulpes