EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000002800 (Gene tree)
Gene ID: 105985762
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein Sm D3-like
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 333 bases
Position: chrKN672377.1:5821849-5822181
Accession: 105985762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000002629	LSM	PF01423.22	5.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000002799	-	333	XM_013016412	ENSDORP00000002629	110 (aa)	XP_012871866	UPI000BAD1159

Gene Model

Click here to download ENSDORG00000002800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000002800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000002800	-	99	77.064	ENSDORG00000027169	-	93	77.064
ENSDORG00000002800	-	100	80.909	ENSDORG00000027706	-	87	80.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000002800	-	100	91.818	ENSG00000100028	SNRPD3	87	91.818	Homo_sapiens
ENSDORG00000002800	-	100	87.387	ENSAPOG00000007512	snrpd3l	87	88.288	Acanthochromis_polyacanthus
ENSDORG00000002800	-	100	91.818	ENSAMEG00000013935	SNRPD3	87	91.818	Ailuropoda_melanoleuca
ENSDORG00000002800	-	100	87.387	ENSACIG00000008871	snrpd3l	87	88.288	Amphilophus_citrinellus
ENSDORG00000002800	-	100	87.387	ENSAOCG00000008497	SNRPD3	87	88.288	Amphiprion_ocellaris
ENSDORG00000002800	-	100	87.387	ENSAOCG00000016743	snrpd3l	87	88.288	Amphiprion_ocellaris
ENSDORG00000002800	-	82	93.333	ENSAOCG00000016759	-	83	93.333	Amphiprion_ocellaris
ENSDORG00000002800	-	100	87.387	ENSAOCG00000022442	-	87	88.288	Amphiprion_ocellaris
ENSDORG00000002800	-	82	93.333	ENSAPEG00000006260	-	83	93.333	Amphiprion_percula
ENSDORG00000002800	-	100	87.387	ENSAPEG00000006273	snrpd3l	87	88.288	Amphiprion_percula
ENSDORG00000002800	-	100	87.387	ENSATEG00000020556	snrpd3l	79	88.288	Anabas_testudineus
ENSDORG00000002800	-	100	91.818	ENSAPLG00000008670	SNRPD3	87	91.818	Anas_platyrhynchos
ENSDORG00000002800	-	100	91.818	ENSANAG00000026106	SNRPD3	87	91.818	Aotus_nancymaae
ENSDORG00000002800	-	100	87.387	ENSACLG00000021295	snrpd3l	87	88.288	Astatotilapia_calliptera
ENSDORG00000002800	-	100	83.929	ENSAMXG00000038984	snrpd3l	88	86.607	Astyanax_mexicanus
ENSDORG00000002800	-	100	91.818	ENSBTAG00000021262	SNRPD3	87	91.818	Bos_taurus
ENSDORG00000002800	-	90	53.535	WBGene00004914	snr-1	57	61.039	Caenorhabditis_elegans
ENSDORG00000002800	-	100	91.818	ENSCJAG00000009630	SNRPD3	87	91.818	Callithrix_jacchus
ENSDORG00000002800	-	100	91.818	ENSCAFG00000013864	-	87	91.818	Canis_familiaris
ENSDORG00000002800	-	100	90.909	ENSCAFG00000017258	-	87	90.909	Canis_familiaris
ENSDORG00000002800	-	100	91.818	ENSCAFG00020007165	-	87	91.818	Canis_lupus_dingo
ENSDORG00000002800	-	100	91.818	ENSCHIG00000000057	SNRPD3	87	91.818	Capra_hircus
ENSDORG00000002800	-	100	91.818	ENSTSYG00000007649	SNRPD3	87	91.818	Carlito_syrichta
ENSDORG00000002800	-	100	91.818	ENSCAPG00000016432	-	87	91.818	Cavia_aperea
ENSDORG00000002800	-	100	91.818	ENSCPOG00000033102	-	87	91.818	Cavia_porcellus
ENSDORG00000002800	-	100	91.818	ENSCCAG00000035006	SNRPD3	87	91.818	Cebus_capucinus
ENSDORG00000002800	-	100	91.818	ENSCATG00000038878	SNRPD3	87	91.818	Cercocebus_atys
ENSDORG00000002800	-	100	91.818	ENSCLAG00000011403	SNRPD3	87	91.818	Chinchilla_lanigera
ENSDORG00000002800	-	100	91.818	ENSCSAG00000010694	SNRPD3	87	91.818	Chlorocebus_sabaeus
ENSDORG00000002800	-	100	91.818	ENSCPBG00000002065	SNRPD3	87	91.818	Chrysemys_picta_bellii
ENSDORG00000002800	-	83	70.330	ENSCSAVG00000004708	-	67	69.231	Ciona_savignyi
ENSDORG00000002800	-	100	91.818	ENSCANG00000032106	SNRPD3	87	91.818	Colobus_angolensis_palliatus
ENSDORG00000002800	-	100	91.818	ENSCGRG00001021990	Snrpd3	87	91.818	Cricetulus_griseus_chok1gshd
ENSDORG00000002800	-	100	91.818	ENSCGRG00000004280	Snrpd3	87	91.818	Cricetulus_griseus_crigri
ENSDORG00000002800	-	100	85.586	ENSCVAG00000001276	snrpd3l	87	89.189	Cyprinodon_variegatus
ENSDORG00000002800	-	100	86.607	ENSDARG00000076283	snrpd3l	88	87.500	Danio_rerio
ENSDORG00000002800	-	100	82.883	ENSDARG00000013800	snrpd3	87	83.784	Danio_rerio
ENSDORG00000002800	-	100	91.818	ENSDNOG00000047424	-	87	91.818	Dasypus_novemcinctus
ENSDORG00000002800	-	100	74.545	ENSDNOG00000042638	-	90	74.545	Dasypus_novemcinctus
ENSDORG00000002800	-	100	85.841	ENSDNOG00000018004	-	88	85.841	Dasypus_novemcinctus
ENSDORG00000002800	-	82	75.556	FBgn0023167	SmD3	60	74.725	Drosophila_melanogaster
ENSDORG00000002800	-	100	91.818	ENSEASG00005000273	SNRPD3	87	91.818	Equus_asinus_asinus
ENSDORG00000002800	-	100	91.818	ENSECAG00000023316	SNRPD3	87	91.818	Equus_caballus
ENSDORG00000002800	-	100	88.182	ENSEEUG00000015518	SNRPD3	87	90.000	Erinaceus_europaeus
ENSDORG00000002800	-	100	84.685	ENSELUG00000001854	snrpd3	87	85.586	Esox_lucius
ENSDORG00000002800	-	100	86.486	ENSELUG00000010092	snrpd3l	87	90.090	Esox_lucius
ENSDORG00000002800	-	100	91.818	ENSFCAG00000001512	SNRPD3	87	91.818	Felis_catus
ENSDORG00000002800	-	100	91.818	ENSFALG00000007303	SNRPD3	87	91.818	Ficedula_albicollis
ENSDORG00000002800	-	100	91.818	ENSFDAG00000010772	SNRPD3	87	91.818	Fukomys_damarensis
ENSDORG00000002800	-	100	86.486	ENSFHEG00000010754	snrpd3l	87	90.090	Fundulus_heteroclitus
ENSDORG00000002800	-	100	86.607	ENSGMOG00000008469	snrpd3l	88	87.500	Gadus_morhua
ENSDORG00000002800	-	100	91.818	ENSGALG00000006596	SNRPD3	87	91.818	Gallus_gallus
ENSDORG00000002800	-	82	93.333	ENSGAFG00000006661	snrpd3l	69	93.333	Gambusia_affinis
ENSDORG00000002800	-	100	86.607	ENSGACG00000017533	snrpd3l	88	87.500	Gasterosteus_aculeatus
ENSDORG00000002800	-	100	91.818	ENSGAGG00000023325	SNRPD3	87	91.818	Gopherus_agassizii
ENSDORG00000002800	-	100	91.818	ENSGGOG00000015640	SNRPD3	87	91.818	Gorilla_gorilla
ENSDORG00000002800	-	100	87.387	ENSHBUG00000001332	snrpd3l	87	88.288	Haplochromis_burtoni
ENSDORG00000002800	-	99	91.743	ENSHGLG00000009844	-	87	91.743	Heterocephalus_glaber_female
ENSDORG00000002800	-	100	91.818	ENSHGLG00000016496	SNRPD3	87	91.818	Heterocephalus_glaber_female
ENSDORG00000002800	-	99	91.743	ENSHGLG00100011326	-	87	91.743	Heterocephalus_glaber_male
ENSDORG00000002800	-	100	91.818	ENSHGLG00100019304	SNRPD3	87	91.818	Heterocephalus_glaber_male
ENSDORG00000002800	-	100	87.387	ENSHCOG00000014396	snrpd3l	87	88.288	Hippocampus_comes
ENSDORG00000002800	-	100	86.607	ENSIPUG00000003083	snrpd3	88	87.500	Ictalurus_punctatus
ENSDORG00000002800	-	100	91.818	ENSSTOG00000025674	SNRPD3	87	91.818	Ictidomys_tridecemlineatus
ENSDORG00000002800	-	100	91.818	ENSJJAG00000013303	Snrpd3	87	91.818	Jaculus_jaculus
ENSDORG00000002800	-	100	86.486	ENSKMAG00000012493	snrpd3l	87	90.090	Kryptolebias_marmoratus
ENSDORG00000002800	-	100	87.387	ENSLBEG00000003202	snrpd3l	87	88.288	Labrus_bergylta
ENSDORG00000002800	-	100	90.909	ENSLACG00000015192	SNRPD3	87	90.909	Latimeria_chalumnae
ENSDORG00000002800	-	100	87.387	ENSLOCG00000006978	snrpd3	87	88.288	Lepisosteus_oculatus
ENSDORG00000002800	-	100	91.818	ENSLAFG00000028180	SNRPD3	87	91.818	Loxodonta_africana
ENSDORG00000002800	-	100	91.818	ENSMFAG00000033628	SNRPD3	87	91.818	Macaca_fascicularis
ENSDORG00000002800	-	100	91.818	ENSMMUG00000000264	SNRPD3	87	91.818	Macaca_mulatta
ENSDORG00000002800	-	100	91.818	ENSMNEG00000020857	SNRPD3	87	91.818	Macaca_nemestrina
ENSDORG00000002800	-	100	91.818	ENSMLEG00000037548	SNRPD3	87	91.818	Mandrillus_leucophaeus
ENSDORG00000002800	-	100	87.387	ENSMZEG00005017664	snrpd3l	87	88.288	Maylandia_zebra
ENSDORG00000002800	-	100	91.818	ENSMAUG00000021393	Snrpd3	87	91.818	Mesocricetus_auratus
ENSDORG00000002800	-	100	91.818	ENSMICG00000034782	SNRPD3	87	91.818	Microcebus_murinus
ENSDORG00000002800	-	100	91.818	ENSMOCG00000009361	Snrpd3	87	91.818	Microtus_ochrogaster
ENSDORG00000002800	-	93	86.275	ENSMMOG00000020985	snrpd3l	57	93.333	Mola_mola
ENSDORG00000002800	-	100	91.818	ENSMODG00000004024	SNRPD3	87	91.818	Monodelphis_domestica
ENSDORG00000002800	-	100	87.387	ENSMALG00000013334	snrpd3l	87	88.288	Monopterus_albus
ENSDORG00000002800	-	100	91.818	MGP_CAROLIEiJ_G0015441	Snrpd3	87	91.818	Mus_caroli
ENSDORG00000002800	-	100	91.818	ENSMUSG00000020180	Snrpd3	87	91.818	Mus_musculus
ENSDORG00000002800	-	100	91.818	MGP_PahariEiJ_G0030857	Snrpd3	87	91.818	Mus_pahari
ENSDORG00000002800	-	100	91.818	MGP_SPRETEiJ_G0016254	Snrpd3	87	91.818	Mus_spretus
ENSDORG00000002800	-	100	91.818	ENSMPUG00000002889	SNRPD3	87	91.818	Mustela_putorius_furo
ENSDORG00000002800	-	100	91.818	ENSMLUG00000009838	SNRPD3	87	91.818	Myotis_lucifugus
ENSDORG00000002800	-	100	91.818	ENSNGAG00000010328	Snrpd3	87	91.818	Nannospalax_galili
ENSDORG00000002800	-	100	87.387	ENSNBRG00000020307	snrpd3l	87	88.288	Neolamprologus_brichardi
ENSDORG00000002800	-	100	91.818	ENSNLEG00000035757	SNRPD3	87	91.818	Nomascus_leucogenys
ENSDORG00000002800	-	100	91.818	ENSMEUG00000003772	SNRPD3	87	91.818	Notamacropus_eugenii
ENSDORG00000002800	-	100	91.818	ENSOPRG00000005763	SNRPD3	87	91.818	Ochotona_princeps
ENSDORG00000002800	-	100	91.818	ENSODEG00000008064	-	87	91.818	Octodon_degus
ENSDORG00000002800	-	100	88.182	ENSODEG00000020162	-	87	88.182	Octodon_degus
ENSDORG00000002800	-	100	90.909	ENSODEG00000019354	-	87	90.909	Octodon_degus
ENSDORG00000002800	-	100	87.387	ENSONIG00000003828	snrpd3l	87	88.288	Oreochromis_niloticus
ENSDORG00000002800	-	100	91.818	ENSOANG00000002463	SNRPD3	87	91.818	Ornithorhynchus_anatinus
ENSDORG00000002800	-	100	91.818	ENSOCUG00000004845	SNRPD3	87	91.818	Oryctolagus_cuniculus
ENSDORG00000002800	-	100	87.387	ENSORLG00000010586	snrpd3l	87	88.288	Oryzias_latipes
ENSDORG00000002800	-	100	87.387	ENSORLG00020011769	snrpd3l	87	88.288	Oryzias_latipes_hni
ENSDORG00000002800	-	100	87.387	ENSORLG00015022940	snrpd3l	87	88.288	Oryzias_latipes_hsok
ENSDORG00000002800	-	100	86.486	ENSOMEG00000022734	snrpd3l	87	90.090	Oryzias_melastigma
ENSDORG00000002800	-	100	91.818	ENSOGAG00000012708	SNRPD3	87	91.818	Otolemur_garnettii
ENSDORG00000002800	-	100	91.818	ENSOARG00000013984	SNRPD3	87	91.818	Ovis_aries
ENSDORG00000002800	-	100	91.818	ENSPPAG00000039191	SNRPD3	87	91.818	Pan_paniscus
ENSDORG00000002800	-	100	91.818	ENSPPRG00000001470	SNRPD3	87	91.818	Panthera_pardus
ENSDORG00000002800	-	100	91.818	ENSPTIG00000016610	SNRPD3	87	91.818	Panthera_tigris_altaica
ENSDORG00000002800	-	100	91.818	ENSPTRG00000014176	SNRPD3	87	91.818	Pan_troglodytes
ENSDORG00000002800	-	100	91.818	ENSPANG00000009279	SNRPD3	87	91.818	Papio_anubis
ENSDORG00000002800	-	100	84.685	ENSPKIG00000006412	snrpd3l	87	88.288	Paramormyrops_kingsleyae
ENSDORG00000002800	-	100	90.000	ENSPSIG00000010022	-	87	90.000	Pelodiscus_sinensis
ENSDORG00000002800	-	84	92.391	ENSPMGG00000004486	snrpd3l	75	92.391	Periophthalmus_magnuspinnatus
ENSDORG00000002800	-	100	91.818	ENSPCIG00000010910	SNRPD3	73	91.818	Phascolarctos_cinereus
ENSDORG00000002800	-	100	86.486	ENSPFOG00000019673	snrpd3l	87	90.090	Poecilia_formosa
ENSDORG00000002800	-	100	86.486	ENSPLAG00000023249	snrpd3l	87	90.090	Poecilia_latipinna
ENSDORG00000002800	-	100	86.486	ENSPMEG00000008482	snrpd3l	87	90.090	Poecilia_mexicana
ENSDORG00000002800	-	82	93.333	ENSPREG00000007532	snrpd3l	74	93.333	Poecilia_reticulata
ENSDORG00000002800	-	100	91.818	ENSPPYG00000011648	SNRPD3	87	91.818	Pongo_abelii
ENSDORG00000002800	-	100	91.818	ENSPCAG00000002065	SNRPD3	87	91.818	Procavia_capensis
ENSDORG00000002800	-	100	91.818	ENSPCOG00000011842	SNRPD3	87	91.818	Propithecus_coquereli
ENSDORG00000002800	-	100	91.818	ENSPVAG00000011405	SNRPD3	88	91.818	Pteropus_vampyrus
ENSDORG00000002800	-	100	87.387	ENSPNYG00000013344	snrpd3l	87	88.288	Pundamilia_nyererei
ENSDORG00000002800	-	100	83.036	ENSPNAG00000008683	snrpd3l	88	85.714	Pygocentrus_nattereri
ENSDORG00000002800	-	100	82.883	ENSPNAG00000010547	snrpd3	87	83.784	Pygocentrus_nattereri
ENSDORG00000002800	-	100	91.818	ENSRNOG00000050410	Snrpd3	87	91.818	Rattus_norvegicus
ENSDORG00000002800	-	100	91.818	ENSRBIG00000029017	SNRPD3	87	91.818	Rhinopithecus_bieti
ENSDORG00000002800	-	100	91.818	ENSRROG00000031152	SNRPD3	87	91.818	Rhinopithecus_roxellana
ENSDORG00000002800	-	75	42.683	YLR147C	SMD3	79	42.683	Saccharomyces_cerevisiae
ENSDORG00000002800	-	100	84.685	ENSSFOG00015014180	snrpd3l	87	85.586	Scleropages_formosus
ENSDORG00000002800	-	100	84.685	ENSSFOG00015007002	snrpd3l	87	88.288	Scleropages_formosus
ENSDORG00000002800	-	100	87.387	ENSSMAG00000019307	snrpd3l	87	88.288	Scophthalmus_maximus
ENSDORG00000002800	-	100	87.387	ENSSDUG00000006870	snrpd3l	87	88.288	Seriola_dumerili
ENSDORG00000002800	-	100	87.387	ENSSLDG00000022664	snrpd3l	87	88.288	Seriola_lalandi_dorsalis
ENSDORG00000002800	-	100	91.818	ENSSARG00000002357	SNRPD3	87	91.818	Sorex_araneus
ENSDORG00000002800	-	100	90.909	ENSSPUG00000014285	SNRPD3	87	90.909	Sphenodon_punctatus
ENSDORG00000002800	-	100	91.818	ENSSSCG00000010058	SNRPD3	87	91.818	Sus_scrofa
ENSDORG00000002800	-	100	91.818	ENSTGUG00000010079	SNRPD3	87	91.818	Taeniopygia_guttata
ENSDORG00000002800	-	82	93.333	ENSTRUG00000023976	snrpd3l	76	93.333	Takifugu_rubripes
ENSDORG00000002800	-	100	86.486	ENSTNIG00000005323	snrpd3l	87	90.090	Tetraodon_nigroviridis
ENSDORG00000002800	-	100	91.818	ENSTBEG00000014334	SNRPD3	87	91.818	Tupaia_belangeri
ENSDORG00000002800	-	100	91.818	ENSTTRG00000006022	SNRPD3	87	91.818	Tursiops_truncatus
ENSDORG00000002800	-	100	91.818	ENSUAMG00000010767	SNRPD3	87	91.818	Ursus_americanus
ENSDORG00000002800	-	100	91.818	ENSUMAG00000001670	SNRPD3	87	91.818	Ursus_maritimus
ENSDORG00000002800	-	100	91.818	ENSVPAG00000000241	SNRPD3	87	91.818	Vicugna_pacos
ENSDORG00000002800	-	100	75.000	ENSXETG00000024918	snrpd3	88	75.000	Xenopus_tropicalis
ENSDORG00000002800	-	100	86.486	ENSXCOG00000004795	snrpd3l	87	90.090	Xiphophorus_couchianus
ENSDORG00000002800	-	100	86.486	ENSXMAG00000001133	snrpd3l	87	90.090	Xiphophorus_maculatus