EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000002879 (Gene tree)
Gene ID: -
Gene Symbol: Ythdf1
Alias: 2210410K23Rik
Full Name: YTH N6-methyladenosine RNA binding protein 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 15483 bases
Position: chrKN672475.1:1700864-1716346
Accession: 105996346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000002701	YTH	PF04146.15	3.9e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000002878	-	1722	XM_013030396	ENSDORP00000002701	573 (aa)	XP_012885850	UPI000BACF091

Gene Model

Click here to download ENSDORG00000002879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000002879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000002879	Ythdf1	100	87.175	ENSG00000149658	YTHDF1	98	87.175	Homo_sapiens
ENSDORG00000002879	Ythdf1	94	73.982	ENSAPOG00000010796	YTHDF1	97	71.809	Acanthochromis_polyacanthus
ENSDORG00000002879	Ythdf1	92	71.558	ENSAPOG00000004358	ythdf1	96	71.864	Acanthochromis_polyacanthus
ENSDORG00000002879	Ythdf1	100	87.522	ENSAMEG00000017323	YTHDF1	98	87.522	Ailuropoda_melanoleuca
ENSDORG00000002879	Ythdf1	91	69.161	ENSACIG00000011264	ythdf1	95	68.336	Amphilophus_citrinellus
ENSDORG00000002879	Ythdf1	94	74.332	ENSACIG00000020083	YTHDF1	97	73.166	Amphilophus_citrinellus
ENSDORG00000002879	Ythdf1	94	73.882	ENSAOCG00000012567	YTHDF1	97	73.166	Amphiprion_ocellaris
ENSDORG00000002879	Ythdf1	93	70.396	ENSAOCG00000022251	ythdf1	96	71.455	Amphiprion_ocellaris
ENSDORG00000002879	Ythdf1	94	74.061	ENSAPEG00000008750	YTHDF1	97	73.345	Amphiprion_percula
ENSDORG00000002879	Ythdf1	91	70.795	ENSATEG00000023840	ythdf1	96	70.879	Anabas_testudineus
ENSDORG00000002879	Ythdf1	95	72.566	ENSATEG00000005996	YTHDF1	98	71.150	Anabas_testudineus
ENSDORG00000002879	Ythdf1	94	86.397	ENSAPLG00000005985	YTHDF1	97	84.743	Anas_platyrhynchos
ENSDORG00000002879	Ythdf1	94	83.794	ENSACAG00000005560	YTHDF1	97	83.794	Anolis_carolinensis
ENSDORG00000002879	Ythdf1	100	74.171	ENSANAG00000021022	-	98	74.171	Aotus_nancymaae
ENSDORG00000002879	Ythdf1	100	85.962	ENSANAG00000034786	-	100	89.980	Aotus_nancymaae
ENSDORG00000002879	Ythdf1	94	73.524	ENSACLG00000025518	YTHDF1	97	72.809	Astatotilapia_calliptera
ENSDORG00000002879	Ythdf1	100	84.229	ENSBTAG00000010383	YTHDF1	100	87.623	Bos_taurus
ENSDORG00000002879	Ythdf1	100	86.655	ENSCJAG00000010056	YTHDF1	98	86.655	Callithrix_jacchus
ENSDORG00000002879	Ythdf1	88	91.339	ENSCAFG00000012772	YTHDF1	99	91.339	Canis_familiaris
ENSDORG00000002879	Ythdf1	88	91.339	ENSCAFG00020001214	YTHDF1	99	91.339	Canis_lupus_dingo
ENSDORG00000002879	Ythdf1	100	83.709	ENSCHIG00000026494	YTHDF1	98	87.638	Capra_hircus
ENSDORG00000002879	Ythdf1	94	92.435	ENSTSYG00000033436	YTHDF1	97	92.435	Carlito_syrichta
ENSDORG00000002879	Ythdf1	94	88.930	ENSCAPG00000002544	YTHDF1	93	88.930	Cavia_aperea
ENSDORG00000002879	Ythdf1	100	86.655	ENSCPOG00000010202	YTHDF1	98	86.655	Cavia_porcellus
ENSDORG00000002879	Ythdf1	100	86.482	ENSCCAG00000024650	YTHDF1	98	86.482	Cebus_capucinus
ENSDORG00000002879	Ythdf1	100	87.522	ENSCATG00000033272	YTHDF1	98	87.522	Cercocebus_atys
ENSDORG00000002879	Ythdf1	100	84.775	ENSCLAG00000005989	YTHDF1	98	88.950	Chinchilla_lanigera
ENSDORG00000002879	Ythdf1	100	87.522	ENSCSAG00000016266	YTHDF1	98	87.522	Chlorocebus_sabaeus
ENSDORG00000002879	Ythdf1	94	87.293	ENSCPBG00000027183	YTHDF1	97	84.530	Chrysemys_picta_bellii
ENSDORG00000002879	Ythdf1	100	87.348	ENSCANG00000029082	YTHDF1	98	87.348	Colobus_angolensis_palliatus
ENSDORG00000002879	Ythdf1	100	88.388	ENSCGRG00001016568	Ythdf1	98	88.388	Cricetulus_griseus_chok1gshd
ENSDORG00000002879	Ythdf1	100	88.388	ENSCGRG00000009207	Ythdf1	100	88.388	Cricetulus_griseus_crigri
ENSDORG00000002879	Ythdf1	91	72.472	ENSCSEG00000020623	YTHDF1	96	72.812	Cynoglossus_semilaevis
ENSDORG00000002879	Ythdf1	92	70.932	ENSCVAG00000017940	ythdf1	95	70.926	Cyprinodon_variegatus
ENSDORG00000002879	Ythdf1	95	71.277	ENSCVAG00000014378	YTHDF1	100	71.758	Cyprinodon_variegatus
ENSDORG00000002879	Ythdf1	100	83.536	ENSDNOG00000043590	YTHDF1	98	83.536	Dasypus_novemcinctus
ENSDORG00000002879	Ythdf1	76	62.585	ENSETEG00000017860	-	96	62.585	Echinops_telfairi
ENSDORG00000002879	Ythdf1	100	86.828	ENSEASG00005023186	YTHDF1	98	86.828	Equus_asinus_asinus
ENSDORG00000002879	Ythdf1	98	86.444	ENSECAG00000019475	YTHDF1	100	90.766	Equus_caballus
ENSDORG00000002879	Ythdf1	89	88.544	ENSEEUG00000007461	YTHDF1	100	88.544	Erinaceus_europaeus
ENSDORG00000002879	Ythdf1	91	71.639	ENSELUG00000001906	YTHDF1	99	71.058	Esox_lucius
ENSDORG00000002879	Ythdf1	94	90.775	ENSFCAG00000008917	YTHDF1	97	90.775	Felis_catus
ENSDORG00000002879	Ythdf1	94	87.109	ENSFALG00000010463	YTHDF1	97	84.530	Ficedula_albicollis
ENSDORG00000002879	Ythdf1	100	87.002	ENSFDAG00000019602	YTHDF1	96	85.505	Fukomys_damarensis
ENSDORG00000002879	Ythdf1	95	73.357	ENSFHEG00000002540	YTHDF1	100	71.403	Fundulus_heteroclitus
ENSDORG00000002879	Ythdf1	93	70.991	ENSFHEG00000023218	ythdf1	97	69.908	Fundulus_heteroclitus
ENSDORG00000002879	Ythdf1	80	88.325	ENSGMOG00000019610	ythdf1	78	84.653	Gadus_morhua
ENSDORG00000002879	Ythdf1	94	86.397	ENSGALG00000005745	YTHDF1	100	84.344	Gallus_gallus
ENSDORG00000002879	Ythdf1	95	71.708	ENSGAFG00000021100	YTHDF1	100	72.469	Gambusia_affinis
ENSDORG00000002879	Ythdf1	91	71.480	ENSGACG00000012014	ythdf1	92	69.838	Gasterosteus_aculeatus
ENSDORG00000002879	Ythdf1	94	72.145	ENSGACG00000002613	YTHDF1	97	69.739	Gasterosteus_aculeatus
ENSDORG00000002879	Ythdf1	94	87.293	ENSGAGG00000003007	YTHDF1	97	84.530	Gopherus_agassizii
ENSDORG00000002879	Ythdf1	100	87.348	ENSGGOG00000008340	YTHDF1	98	87.348	Gorilla_gorilla
ENSDORG00000002879	Ythdf1	94	73.345	ENSHBUG00000004875	YTHDF1	97	72.630	Haplochromis_burtoni
ENSDORG00000002879	Ythdf1	91	70.144	ENSHBUG00000011284	ythdf1	96	69.643	Haplochromis_burtoni
ENSDORG00000002879	Ythdf1	100	87.175	ENSHGLG00000006585	YTHDF1	98	83.189	Heterocephalus_glaber_female
ENSDORG00000002879	Ythdf1	100	87.175	ENSHGLG00100004683	YTHDF1	98	83.189	Heterocephalus_glaber_male
ENSDORG00000002879	Ythdf1	94	69.435	ENSHCOG00000011303	YTHDF1	100	72.089	Hippocampus_comes
ENSDORG00000002879	Ythdf1	94	75.774	ENSIPUG00000000425	Ythdf1	97	75.045	Ictalurus_punctatus
ENSDORG00000002879	Ythdf1	100	88.215	ENSSTOG00000023001	YTHDF1	99	88.215	Ictidomys_tridecemlineatus
ENSDORG00000002879	Ythdf1	100	88.215	ENSJJAG00000013589	Ythdf1	100	88.215	Jaculus_jaculus
ENSDORG00000002879	Ythdf1	91	71.296	ENSKMAG00000005595	ythdf1	96	70.037	Kryptolebias_marmoratus
ENSDORG00000002879	Ythdf1	95	71.629	ENSKMAG00000017472	YTHDF1	100	72.114	Kryptolebias_marmoratus
ENSDORG00000002879	Ythdf1	91	71.747	ENSLBEG00000014105	ythdf1	92	71.639	Labrus_bergylta
ENSDORG00000002879	Ythdf1	94	74.690	ENSLBEG00000012068	YTHDF1	98	73.982	Labrus_bergylta
ENSDORG00000002879	Ythdf1	93	79.779	ENSLACG00000014195	YTHDF1	96	80.150	Latimeria_chalumnae
ENSDORG00000002879	Ythdf1	94	76.418	ENSLOCG00000005020	ythdf1	92	77.298	Lepisosteus_oculatus
ENSDORG00000002879	Ythdf1	100	85.986	ENSLAFG00000008884	YTHDF1	98	85.986	Loxodonta_africana
ENSDORG00000002879	Ythdf1	100	87.522	ENSMFAG00000042868	YTHDF1	98	87.522	Macaca_fascicularis
ENSDORG00000002879	Ythdf1	100	87.522	ENSMMUG00000009227	YTHDF1	98	87.522	Macaca_mulatta
ENSDORG00000002879	Ythdf1	100	87.522	ENSMNEG00000030851	YTHDF1	98	87.522	Macaca_nemestrina
ENSDORG00000002879	Ythdf1	100	87.522	ENSMLEG00000009252	YTHDF1	100	87.522	Mandrillus_leucophaeus
ENSDORG00000002879	Ythdf1	95	74.199	ENSMAMG00000011072	YTHDF1	98	72.242	Mastacembelus_armatus
ENSDORG00000002879	Ythdf1	92	70.310	ENSMAMG00000024255	ythdf1	96	71.067	Mastacembelus_armatus
ENSDORG00000002879	Ythdf1	94	73.345	ENSMZEG00005023596	YTHDF1	97	72.630	Maylandia_zebra
ENSDORG00000002879	Ythdf1	91	71.245	ENSMZEG00005026397	ythdf1	96	70.856	Maylandia_zebra
ENSDORG00000002879	Ythdf1	94	86.397	ENSMGAG00000006139	YTHDF1	97	84.743	Meleagris_gallopavo
ENSDORG00000002879	Ythdf1	100	88.042	ENSMAUG00000017660	Ythdf1	96	92.015	Mesocricetus_auratus
ENSDORG00000002879	Ythdf1	100	87.695	ENSMICG00000032266	YTHDF1	98	87.695	Microcebus_murinus
ENSDORG00000002879	Ythdf1	100	87.695	ENSMOCG00000013573	Ythdf1	98	87.695	Microtus_ochrogaster
ENSDORG00000002879	Ythdf1	88	87.476	ENSMODG00000016842	YTHDF1	100	85.323	Monodelphis_domestica
ENSDORG00000002879	Ythdf1	95	72.487	ENSMALG00000022209	YTHDF1	98	72.163	Monopterus_albus
ENSDORG00000002879	Ythdf1	92	70.144	ENSMALG00000015672	ythdf1	95	70.324	Monopterus_albus
ENSDORG00000002879	Ythdf1	100	88.083	MGP_CAROLIEiJ_G0024790	Ythdf1	98	88.083	Mus_caroli
ENSDORG00000002879	Ythdf1	100	88.468	ENSMUSG00000038848	Ythdf1	98	88.468	Mus_musculus
ENSDORG00000002879	Ythdf1	100	87.952	MGP_PahariEiJ_G0026237	Ythdf1	98	87.952	Mus_pahari
ENSDORG00000002879	Ythdf1	100	88.468	MGP_SPRETEiJ_G0025715	Ythdf1	98	88.468	Mus_spretus
ENSDORG00000002879	Ythdf1	88	86.248	ENSMPUG00000008111	YTHDF1	100	84.283	Mustela_putorius_furo
ENSDORG00000002879	Ythdf1	97	87.299	ENSMLUG00000002241	YTHDF1	99	87.299	Myotis_lucifugus
ENSDORG00000002879	Ythdf1	100	88.735	ENSNGAG00000000334	Ythdf1	98	88.735	Nannospalax_galili
ENSDORG00000002879	Ythdf1	94	73.345	ENSNBRG00000015321	YTHDF1	97	72.630	Neolamprologus_brichardi
ENSDORG00000002879	Ythdf1	95	67.958	ENSNBRG00000008213	ythdf1	95	70.000	Neolamprologus_brichardi
ENSDORG00000002879	Ythdf1	92	77.778	ENSOPRG00000001758	-	98	77.247	Ochotona_princeps
ENSDORG00000002879	Ythdf1	100	84.083	ENSODEG00000004380	-	98	84.256	Octodon_degus
ENSDORG00000002879	Ythdf1	100	68.729	ENSODEG00000000074	-	98	68.900	Octodon_degus
ENSDORG00000002879	Ythdf1	100	82.729	ENSOANG00000003723	YTHDF1	98	81.002	Ornithorhynchus_anatinus
ENSDORG00000002879	Ythdf1	94	82.103	ENSOCUG00000012780	YTHDF1	96	81.181	Oryctolagus_cuniculus
ENSDORG00000002879	Ythdf1	91	69.464	ENSORLG00000014665	YTHDF1	92	68.861	Oryzias_latipes
ENSDORG00000002879	Ythdf1	95	71.836	ENSORLG00000009739	YTHDF1	100	72.014	Oryzias_latipes
ENSDORG00000002879	Ythdf1	91	69.821	ENSORLG00020000307	ythdf1	92	69.217	Oryzias_latipes_hni
ENSDORG00000002879	Ythdf1	95	72.744	ENSORLG00020001332	YTHDF1	100	72.744	Oryzias_latipes_hni
ENSDORG00000002879	Ythdf1	95	71.480	ENSORLG00015018321	YTHDF1	100	71.658	Oryzias_latipes_hsok
ENSDORG00000002879	Ythdf1	91	69.643	ENSORLG00015006302	ythdf1	92	69.039	Oryzias_latipes_hsok
ENSDORG00000002879	Ythdf1	94	68.896	ENSOMEG00000011843	YTHDF1	92	68.551	Oryzias_melastigma
ENSDORG00000002879	Ythdf1	92	70.985	ENSOMEG00000002941	YTHDF1	97	70.545	Oryzias_melastigma
ENSDORG00000002879	Ythdf1	100	85.615	ENSOGAG00000000480	YTHDF1	98	85.615	Otolemur_garnettii
ENSDORG00000002879	Ythdf1	100	87.348	ENSPPAG00000023277	YTHDF1	99	87.348	Pan_paniscus
ENSDORG00000002879	Ythdf1	94	90.775	ENSPPRG00000020805	YTHDF1	97	90.775	Panthera_pardus
ENSDORG00000002879	Ythdf1	94	74.723	ENSPTIG00000017355	YTHDF1	93	93.249	Panthera_tigris_altaica
ENSDORG00000002879	Ythdf1	100	87.348	ENSPTRG00000013730	YTHDF1	98	87.348	Pan_troglodytes
ENSDORG00000002879	Ythdf1	100	87.522	ENSPANG00000021472	YTHDF1	98	87.522	Papio_anubis
ENSDORG00000002879	Ythdf1	92	71.376	ENSPKIG00000005026	YTHDF1	95	71.082	Paramormyrops_kingsleyae
ENSDORG00000002879	Ythdf1	96	68.028	ENSPKIG00000005427	ythdf1	99	68.617	Paramormyrops_kingsleyae
ENSDORG00000002879	Ythdf1	93	86.034	ENSPSIG00000005529	YTHDF1	94	84.280	Pelodiscus_sinensis
ENSDORG00000002879	Ythdf1	91	69.009	ENSPMGG00000015328	ythdf1	96	69.231	Periophthalmus_magnuspinnatus
ENSDORG00000002879	Ythdf1	100	88.042	ENSPEMG00000020199	Ythdf1	97	92.015	Peromyscus_maniculatus_bairdii
ENSDORG00000002879	Ythdf1	99	82.343	ENSPCIG00000017170	YTHDF1	100	85.127	Phascolarctos_cinereus
ENSDORG00000002879	Ythdf1	93	72.101	ENSPLAG00000006653	ythdf1	96	71.033	Poecilia_latipinna
ENSDORG00000002879	Ythdf1	94	71.429	ENSPMEG00000020969	-	97	72.371	Poecilia_mexicana
ENSDORG00000002879	Ythdf1	93	71.558	ENSPMEG00000023753	ythdf1	96	70.588	Poecilia_mexicana
ENSDORG00000002879	Ythdf1	93	71.325	ENSPREG00000002173	ythdf1	96	71.087	Poecilia_reticulata
ENSDORG00000002879	Ythdf1	100	72.852	ENSPPYG00000011226	YTHDF1	100	95.025	Pongo_abelii
ENSDORG00000002879	Ythdf1	86	84.040	ENSPCAG00000002452	YTHDF1	98	83.968	Procavia_capensis
ENSDORG00000002879	Ythdf1	100	87.695	ENSPCOG00000025969	YTHDF1	98	87.695	Propithecus_coquereli
ENSDORG00000002879	Ythdf1	99	77.895	ENSPVAG00000017568	YTHDF1	97	77.005	Pteropus_vampyrus
ENSDORG00000002879	Ythdf1	94	73.345	ENSPNYG00000002266	YTHDF1	97	72.630	Pundamilia_nyererei
ENSDORG00000002879	Ythdf1	91	71.245	ENSPNYG00000014007	ythdf1	96	70.856	Pundamilia_nyererei
ENSDORG00000002879	Ythdf1	94	92.435	ENSRNOG00000027015	Ythdf1	97	92.435	Rattus_norvegicus
ENSDORG00000002879	Ythdf1	100	87.002	ENSRBIG00000044959	YTHDF1	98	87.002	Rhinopithecus_bieti
ENSDORG00000002879	Ythdf1	100	86.828	ENSRROG00000033014	YTHDF1	98	86.828	Rhinopithecus_roxellana
ENSDORG00000002879	Ythdf1	99	87.368	ENSSBOG00000027278	YTHDF1	100	88.802	Saimiri_boliviensis_boliviensis
ENSDORG00000002879	Ythdf1	100	83.247	ENSSHAG00000010430	YTHDF1	88	82.383	Sarcophilus_harrisii
ENSDORG00000002879	Ythdf1	94	73.656	ENSSFOG00015000284	ythdf1	95	73.835	Scleropages_formosus
ENSDORG00000002879	Ythdf1	69	80.132	ENSSMAG00000013715	ythdf1	85	78.319	Scophthalmus_maximus
ENSDORG00000002879	Ythdf1	89	78.862	ENSSMAG00000007635	YTHDF1	93	70.714	Scophthalmus_maximus
ENSDORG00000002879	Ythdf1	91	72.243	ENSSDUG00000000435	ythdf1	95	72.364	Seriola_dumerili
ENSDORG00000002879	Ythdf1	94	73.882	ENSSDUG00000015823	YTHDF1	97	73.166	Seriola_dumerili
ENSDORG00000002879	Ythdf1	95	71.067	ENSSLDG00000001054	YTHDF1	97	71.067	Seriola_lalandi_dorsalis
ENSDORG00000002879	Ythdf1	88	84.314	ENSSPUG00000015143	YTHDF1	100	84.314	Sphenodon_punctatus
ENSDORG00000002879	Ythdf1	94	73.619	ENSSPAG00000003666	YTHDF1	96	72.906	Stegastes_partitus
ENSDORG00000002879	Ythdf1	94	86.924	ENSSSCG00000040086	YTHDF1	97	83.610	Sus_scrofa
ENSDORG00000002879	Ythdf1	94	86.029	ENSTGUG00000007565	YTHDF1	98	84.743	Taeniopygia_guttata
ENSDORG00000002879	Ythdf1	94	71.403	ENSTNIG00000003975	YTHDF1	97	69.604	Tetraodon_nigroviridis
ENSDORG00000002879	Ythdf1	94	71.038	ENSTNIG00000012490	ythdf1	96	71.455	Tetraodon_nigroviridis
ENSDORG00000002879	Ythdf1	92	88.764	ENSTTRG00000001804	YTHDF1	95	88.762	Tursiops_truncatus
ENSDORG00000002879	Ythdf1	97	90.909	ENSUAMG00000011021	YTHDF1	100	91.552	Ursus_americanus
ENSDORG00000002879	Ythdf1	88	91.552	ENSUMAG00000022290	YTHDF1	100	91.552	Ursus_maritimus
ENSDORG00000002879	Ythdf1	88	91.142	ENSVVUG00000015275	YTHDF1	99	91.142	Vulpes_vulpes
ENSDORG00000002879	Ythdf1	93	80.183	ENSXETG00000027086	ythdf1	95	79.516	Xenopus_tropicalis
ENSDORG00000002879	Ythdf1	94	69.735	ENSXCOG00000002490	ythdf1	94	70.054	Xiphophorus_couchianus
ENSDORG00000002879	Ythdf1	93	71.248	ENSXMAG00000008525	ythdf1	95	70.879	Xiphophorus_maculatus
ENSDORG00000002879	Ythdf1	95	72.469	ENSXMAG00000015644	YTHDF1	100	73.132	Xiphophorus_maculatus