EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000002982 (Gene tree)
Gene ID: 105998910
Gene Symbol: Bms1
Alias: Bms1l
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 34059 bases
Position: chrKN672522.1:1634091-1668149
Accession: 105998910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000002802	AARP2CN	PF08142.12	6.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000002982	-	3831	XM_013033758	ENSDORP00000002802	1276 (aa)	XP_012889212	UPI000BACEFA8

Gene Model

Click here to download ENSDORG00000002982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000002982's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000002982	Bms1	99	87.754	ENSG00000165733	BMS1	99	87.910	Homo_sapiens
ENSDORG00000002982	Bms1	71	71.626	ENSAPOG00000002296	bms1	99	58.808	Acanthochromis_polyacanthus
ENSDORG00000002982	Bms1	99	87.529	ENSAMEG00000016834	BMS1	99	87.598	Ailuropoda_melanoleuca
ENSDORG00000002982	Bms1	78	79.564	ENSACIG00000002588	bms1	85	77.250	Amphilophus_citrinellus
ENSDORG00000002982	Bms1	95	72.316	ENSAPLG00000003759	BMS1	100	72.514	Anas_platyrhynchos
ENSDORG00000002982	Bms1	99	70.084	ENSACAG00000004537	-	99	69.954	Anolis_carolinensis
ENSDORG00000002982	Bms1	99	87.539	ENSANAG00000023432	BMS1	99	87.461	Aotus_nancymaae
ENSDORG00000002982	Bms1	87	68.590	ENSACLG00000001294	bms1	95	68.750	Astatotilapia_calliptera
ENSDORG00000002982	Bms1	99	86.994	ENSBTAG00000012878	BMS1	99	87.305	Bos_taurus
ENSDORG00000002982	Bms1	80	52.300	WBGene00022021	Y61A9LA.10	98	51.887	Caenorhabditis_elegans
ENSDORG00000002982	Bms1	99	87.850	ENSCJAG00000021705	BMS1	99	87.695	Callithrix_jacchus
ENSDORG00000002982	Bms1	99	87.451	ENSCAFG00000007114	BMS1	100	86.879	Canis_familiaris
ENSDORG00000002982	Bms1	99	87.451	ENSCAFG00020025282	BMS1	100	86.879	Canis_lupus_dingo
ENSDORG00000002982	Bms1	99	86.615	ENSCHIG00000023251	BMS1	99	87.082	Capra_hircus
ENSDORG00000002982	Bms1	99	80.748	ENSCAPG00000008652	BMS1	100	80.655	Cavia_aperea
ENSDORG00000002982	Bms1	99	84.723	ENSCPOG00000000502	BMS1	100	84.555	Cavia_porcellus
ENSDORG00000002982	Bms1	99	72.685	ENSCCAG00000024969	-	99	72.118	Cebus_capucinus
ENSDORG00000002982	Bms1	90	65.562	ENSCATG00000008695	-	97	65.328	Cercocebus_atys
ENSDORG00000002982	Bms1	99	88.231	ENSCATG00000030625	-	99	87.997	Cercocebus_atys
ENSDORG00000002982	Bms1	99	84.914	ENSCLAG00000002446	BMS1	100	84.747	Chinchilla_lanigera
ENSDORG00000002982	Bms1	99	88.309	ENSCSAG00000011118	BMS1	99	88.075	Chlorocebus_sabaeus
ENSDORG00000002982	Bms1	99	83.788	ENSCHOG00000011055	BMS1	99	84.657	Choloepus_hoffmanni
ENSDORG00000002982	Bms1	99	73.843	ENSCPBG00000025581	BMS1	99	73.583	Chrysemys_picta_bellii
ENSDORG00000002982	Bms1	79	59.223	ENSCING00000003181	-	97	59.223	Ciona_intestinalis
ENSDORG00000002982	Bms1	67	53.938	ENSCSAVG00000004113	-	84	58.405	Ciona_savignyi
ENSDORG00000002982	Bms1	99	88.612	ENSCANG00000011609	BMS1	99	88.612	Colobus_angolensis_palliatus
ENSDORG00000002982	Bms1	99	85.714	ENSCGRG00001019461	Bms1	100	85.171	Cricetulus_griseus_chok1gshd
ENSDORG00000002982	Bms1	100	85.681	ENSCGRG00000009016	Bms1	100	85.139	Cricetulus_griseus_crigri
ENSDORG00000002982	Bms1	82	73.536	ENSCSEG00000002469	bms1	99	62.765	Cynoglossus_semilaevis
ENSDORG00000002982	Bms1	85	70.113	ENSCVAG00000008371	bms1	95	69.614	Cyprinodon_variegatus
ENSDORG00000002982	Bms1	88	68.713	ENSDARG00000054154	bms1	99	62.393	Danio_rerio
ENSDORG00000002982	Bms1	99	86.687	ENSDNOG00000015761	BMS1	99	86.057	Dasypus_novemcinctus
ENSDORG00000002982	Bms1	79	57.882	FBgn0036686	CG7728	90	58.435	Drosophila_melanogaster
ENSDORG00000002982	Bms1	85	83.036	ENSETEG00000009554	BMS1	91	83.036	Echinops_telfairi
ENSDORG00000002982	Bms1	99	86.552	ENSEASG00005006894	BMS1	99	87.480	Equus_asinus_asinus
ENSDORG00000002982	Bms1	99	87.793	ENSECAG00000001358	BMS1	99	87.480	Equus_caballus
ENSDORG00000002982	Bms1	91	66.667	ENSELUG00000001756	bms1	97	66.981	Esox_lucius
ENSDORG00000002982	Bms1	99	86.817	ENSFCAG00000011220	BMS1	99	87.285	Felis_catus
ENSDORG00000002982	Bms1	99	70.745	ENSFALG00000006882	BMS1	99	70.919	Ficedula_albicollis
ENSDORG00000002982	Bms1	99	84.465	ENSFDAG00000001422	BMS1	100	83.919	Fukomys_damarensis
ENSDORG00000002982	Bms1	85	68.894	ENSFHEG00000003367	bms1	95	68.174	Fundulus_heteroclitus
ENSDORG00000002982	Bms1	98	63.269	ENSGMOG00000000718	bms1	88	74.201	Gadus_morhua
ENSDORG00000002982	Bms1	61	68.961	ENSGALG00000002624	BMS1	99	71.669	Gallus_gallus
ENSDORG00000002982	Bms1	99	60.046	ENSGACG00000015334	bms1	99	59.737	Gasterosteus_aculeatus
ENSDORG00000002982	Bms1	99	74.608	ENSGAGG00000003467	BMS1	99	74.453	Gopherus_agassizii
ENSDORG00000002982	Bms1	87	68.590	ENSHBUG00000022628	bms1	95	68.750	Haplochromis_burtoni
ENSDORG00000002982	Bms1	99	84.260	ENSHGLG00000000477	BMS1	99	83.634	Heterocephalus_glaber_female
ENSDORG00000002982	Bms1	99	84.338	ENSHGLG00100002176	BMS1	99	83.712	Heterocephalus_glaber_male
ENSDORG00000002982	Bms1	99	61.254	ENSIPUG00000017855	bms1	94	73.423	Ictalurus_punctatus
ENSDORG00000002982	Bms1	99	88.144	ENSSTOG00000015063	BMS1	100	88.534	Ictidomys_tridecemlineatus
ENSDORG00000002982	Bms1	99	86.185	ENSJJAG00000017328	Bms1	99	85.793	Jaculus_jaculus
ENSDORG00000002982	Bms1	58	63.899	ENSKMAG00000021982	bms1	94	63.082	Kryptolebias_marmoratus
ENSDORG00000002982	Bms1	82	71.298	ENSLBEG00000028208	bms1	95	67.402	Labrus_bergylta
ENSDORG00000002982	Bms1	99	61.691	ENSLACG00000001600	BMS1	100	62.558	Latimeria_chalumnae
ENSDORG00000002982	Bms1	84	75.510	ENSLOCG00000012914	bms1	99	63.403	Lepisosteus_oculatus
ENSDORG00000002982	Bms1	99	85.514	ENSLAFG00000006250	BMS1	99	84.502	Loxodonta_africana
ENSDORG00000002982	Bms1	82	87.970	ENSMFAG00000037771	BMS1	97	87.970	Macaca_fascicularis
ENSDORG00000002982	Bms1	90	74.029	ENSMMUG00000007426	-	99	74.029	Macaca_mulatta
ENSDORG00000002982	Bms1	84	69.153	ENSMLEG00000029084	-	97	68.692	Mandrillus_leucophaeus
ENSDORG00000002982	Bms1	99	59.581	ENSMAMG00000020855	bms1	88	69.526	Mastacembelus_armatus
ENSDORG00000002982	Bms1	97	60.754	ENSMZEG00005005663	bms1	95	68.750	Maylandia_zebra
ENSDORG00000002982	Bms1	95	70.663	ENSMGAG00000001170	BMS1	99	70.983	Meleagris_gallopavo
ENSDORG00000002982	Bms1	99	84.681	ENSMAUG00000002195	Bms1	100	84.872	Mesocricetus_auratus
ENSDORG00000002982	Bms1	99	87.267	ENSMICG00000009977	BMS1	99	86.568	Microcebus_murinus
ENSDORG00000002982	Bms1	99	84.759	ENSMOCG00000002038	Bms1	99	84.084	Microtus_ochrogaster
ENSDORG00000002982	Bms1	85	68.013	ENSMMOG00000000977	bms1	96	66.667	Mola_mola
ENSDORG00000002982	Bms1	99	77.940	ENSMODG00000001177	BMS1	99	78.154	Monodelphis_domestica
ENSDORG00000002982	Bms1	99	61.864	ENSMALG00000009680	bms1	99	60.355	Monopterus_albus
ENSDORG00000002982	Bms1	75	89.683	MGP_CAROLIEiJ_G0028785	-	85	93.689	Mus_caroli
ENSDORG00000002982	Bms1	99	84.837	ENSMUSG00000030138	Bms1	99	85.070	Mus_musculus
ENSDORG00000002982	Bms1	99	84.891	MGP_PahariEiJ_G0022539	Bms1	99	84.891	Mus_pahari
ENSDORG00000002982	Bms1	99	84.914	MGP_SPRETEiJ_G0029816	Bms1	99	84.837	Mus_spretus
ENSDORG00000002982	Bms1	99	88.732	ENSMPUG00000017276	BMS1	99	87.950	Mustela_putorius_furo
ENSDORG00000002982	Bms1	99	86.137	ENSMLUG00000003260	BMS1	99	85.280	Myotis_lucifugus
ENSDORG00000002982	Bms1	99	86.193	ENSNLEG00000015791	BMS1	99	86.594	Nomascus_leucogenys
ENSDORG00000002982	Bms1	81	94.272	ENSOPRG00000005195	BMS1	81	94.272	Ochotona_princeps
ENSDORG00000002982	Bms1	99	83.725	ENSODEG00000005554	BMS1	99	83.737	Octodon_degus
ENSDORG00000002982	Bms1	89	68.810	ENSONIG00000007227	bms1	99	60.802	Oreochromis_niloticus
ENSDORG00000002982	Bms1	99	75.919	ENSOANG00000000662	-	99	75.310	Ornithorhynchus_anatinus
ENSDORG00000002982	Bms1	99	86.973	ENSOCUG00000005354	BMS1	99	86.739	Oryctolagus_cuniculus
ENSDORG00000002982	Bms1	83	73.483	ENSORLG00000014655	bms1	95	67.899	Oryzias_latipes
ENSDORG00000002982	Bms1	88	68.608	ENSORLG00020016246	bms1	99	61.864	Oryzias_latipes_hni
ENSDORG00000002982	Bms1	88	68.447	ENSORLG00015014183	bms1	87	67.315	Oryzias_latipes_hsok
ENSDORG00000002982	Bms1	87	69.839	ENSOMEG00000015042	bms1	52	69.181	Oryzias_melastigma
ENSDORG00000002982	Bms1	99	88.034	ENSOGAG00000006511	BMS1	99	88.034	Otolemur_garnettii
ENSDORG00000002982	Bms1	99	86.656	ENSOARG00000003900	BMS1	99	87.044	Ovis_aries
ENSDORG00000002982	Bms1	99	84.334	ENSPPAG00000027837	BMS1	99	84.489	Pan_paniscus
ENSDORG00000002982	Bms1	99	87.041	ENSPPRG00000001311	BMS1	99	87.510	Panthera_pardus
ENSDORG00000002982	Bms1	99	85.402	ENSPTIG00000009652	BMS1	99	85.792	Panthera_tigris_altaica
ENSDORG00000002982	Bms1	99	87.832	ENSPTRG00000002441	BMS1	99	87.832	Pan_troglodytes
ENSDORG00000002982	Bms1	99	72.629	ENSPSIG00000006481	BMS1	99	73.029	Pelodiscus_sinensis
ENSDORG00000002982	Bms1	99	78.366	ENSPEMG00000022467	Bms1	100	77.347	Peromyscus_maniculatus_bairdii
ENSDORG00000002982	Bms1	95	91.946	ENSPCIG00000001339	BMS1	99	91.946	Phascolarctos_cinereus
ENSDORG00000002982	Bms1	86	67.223	ENSPFOG00000015180	bms1	95	67.363	Poecilia_formosa
ENSDORG00000002982	Bms1	80	73.892	ENSPMEG00000023176	bms1	90	67.846	Poecilia_mexicana
ENSDORG00000002982	Bms1	85	67.903	ENSPREG00000002695	bms1	95	67.949	Poecilia_reticulata
ENSDORG00000002982	Bms1	60	83.933	ENSPPYG00000002836	-	99	84.062	Pongo_abelii
ENSDORG00000002982	Bms1	73	95.238	ENSPCAG00000014528	BMS1	73	95.238	Procavia_capensis
ENSDORG00000002982	Bms1	95	82.820	ENSPCOG00000023834	-	99	82.401	Propithecus_coquereli
ENSDORG00000002982	Bms1	99	85.725	ENSPVAG00000000725	BMS1	99	84.747	Pteropus_vampyrus
ENSDORG00000002982	Bms1	97	62.299	ENSPNYG00000018866	bms1	87	65.835	Pundamilia_nyererei
ENSDORG00000002982	Bms1	50	67.957	ENSPNAG00000000676	bms1	99	63.354	Pygocentrus_nattereri
ENSDORG00000002982	Bms1	82	82.436	ENSRNOG00000006576	Bms1	100	82.716	Rattus_norvegicus
ENSDORG00000002982	Bms1	99	86.817	ENSRROG00000040101	BMS1	99	86.817	Rhinopithecus_roxellana
ENSDORG00000002982	Bms1	74	45.106	YPL217C	-	81	46.957	Saccharomyces_cerevisiae
ENSDORG00000002982	Bms1	99	88.006	ENSSBOG00000035778	BMS1	99	88.240	Saimiri_boliviensis_boliviensis
ENSDORG00000002982	Bms1	99	77.395	ENSSHAG00000005062	BMS1	99	76.787	Sarcophilus_harrisii
ENSDORG00000002982	Bms1	82	72.874	ENSSMAG00000019966	bms1	99	61.026	Scophthalmus_maximus
ENSDORG00000002982	Bms1	69	76.425	ENSSARG00000014407	BMS1	100	74.749	Sorex_araneus
ENSDORG00000002982	Bms1	99	71.636	ENSSPUG00000014454	BMS1	99	71.277	Sphenodon_punctatus
ENSDORG00000002982	Bms1	99	87.734	ENSSSCG00000010198	BMS1	99	88.203	Sus_scrofa
ENSDORG00000002982	Bms1	99	70.894	ENSTGUG00000006302	-	99	71.059	Taeniopygia_guttata
ENSDORG00000002982	Bms1	86	64.943	ENSTRUG00000008028	bms1	95	64.620	Takifugu_rubripes
ENSDORG00000002982	Bms1	99	59.594	ENSTNIG00000006216	bms1	88	66.179	Tetraodon_nigroviridis
ENSDORG00000002982	Bms1	61	91.497	ENSTBEG00000001673	-	63	91.438	Tupaia_belangeri
ENSDORG00000002982	Bms1	99	84.957	ENSTTRG00000007983	BMS1	99	84.489	Tursiops_truncatus
ENSDORG00000002982	Bms1	99	87.940	ENSUAMG00000023996	BMS1	99	88.254	Ursus_americanus
ENSDORG00000002982	Bms1	99	87.862	ENSUMAG00000016523	BMS1	99	88.175	Ursus_maritimus
ENSDORG00000002982	Bms1	88	81.162	ENSVPAG00000007477	BMS1	94	93.590	Vicugna_pacos
ENSDORG00000002982	Bms1	99	87.373	ENSVVUG00000021305	BMS1	100	86.801	Vulpes_vulpes
ENSDORG00000002982	Bms1	98	65.296	ENSXETG00000008158	bms1	99	65.603	Xenopus_tropicalis
ENSDORG00000002982	Bms1	85	67.925	ENSXCOG00000000506	bms1	95	75.676	Xiphophorus_couchianus
ENSDORG00000002982	Bms1	85	67.775	ENSXMAG00000014236	bms1	95	67.633	Xiphophorus_maculatus