EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000003028 (Gene tree)
Gene ID: 105991316
Gene Symbol: Slbp
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 36573 bases
Position: chrKN672417.1:979033-1015605
Accession: 105991316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000016401	SLBP_RNA_bind	PF15247.6	2e-29	1	1
ENSDORP00000002843	SLBP_RNA_bind	PF15247.6	3e-29	1	1
ENSDORP00000023260	SLBP_RNA_bind	PF15247.6	3.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000028128	-	1444	XM_013023927	ENSDORP00000023260	216 (aa)	XP_012879381	UPI000BAD1359
ENSDORT00000003028	-	591	-	ENSDORP00000002843	196 (aa)	-	UPI000BAD037C
ENSDORT00000028880	-	489	-	ENSDORP00000016401	162 (aa)	-	UPI000BAD19DF

Gene Model

Click here to download ENSDORG00000003028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000003028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000003028	Slbp	100	89.815	ENSG00000163950	SLBP	91	89.815	Homo_sapiens
ENSDORG00000003028	Slbp	91	64.901	ENSAPOG00000004953	slbp	58	58.537	Acanthochromis_polyacanthus
ENSDORG00000003028	Slbp	100	93.056	ENSAMEG00000016915	SLBP	99	93.056	Ailuropoda_melanoleuca
ENSDORG00000003028	Slbp	91	66.883	ENSACIG00000022308	slbp	63	60.976	Amphilophus_citrinellus
ENSDORG00000003028	Slbp	91	64.901	ENSAOCG00000024545	slbp	58	58.537	Amphiprion_ocellaris
ENSDORG00000003028	Slbp	91	64.286	ENSAPEG00000017629	slbp	58	58.537	Amphiprion_percula
ENSDORG00000003028	Slbp	91	66.234	ENSATEG00000016358	slbp	58	60.366	Anabas_testudineus
ENSDORG00000003028	Slbp	100	80.822	ENSAPLG00000015989	-	99	78.995	Anas_platyrhynchos
ENSDORG00000003028	Slbp	100	89.352	ENSANAG00000034769	SLBP	91	89.352	Aotus_nancymaae
ENSDORG00000003028	Slbp	91	66.887	ENSACLG00000007036	-	54	62.667	Astatotilapia_calliptera
ENSDORG00000003028	Slbp	92	65.563	ENSAMXG00000014527	slbp	59	63.975	Astyanax_mexicanus
ENSDORG00000003028	Slbp	100	91.204	ENSBTAG00000001328	SLBP	79	91.204	Bos_taurus
ENSDORG00000003028	Slbp	100	87.037	ENSCJAG00000001790	SLBP	88	76.777	Callithrix_jacchus
ENSDORG00000003028	Slbp	100	91.667	ENSCAFG00000015016	SLBP	79	91.667	Canis_familiaris
ENSDORG00000003028	Slbp	100	91.667	ENSCAFG00020012334	SLBP	79	91.667	Canis_lupus_dingo
ENSDORG00000003028	Slbp	100	91.204	ENSCHIG00000019364	SLBP	82	91.204	Capra_hircus
ENSDORG00000003028	Slbp	100	90.278	ENSTSYG00000000376	SLBP	91	90.278	Carlito_syrichta
ENSDORG00000003028	Slbp	84	90.055	ENSCAPG00000016340	SLBP	100	90.055	Cavia_aperea
ENSDORG00000003028	Slbp	100	91.284	ENSCPOG00000000031	SLBP	79	91.284	Cavia_porcellus
ENSDORG00000003028	Slbp	61	77.500	ENSCCAG00000026134	SLBP	59	77.500	Cebus_capucinus
ENSDORG00000003028	Slbp	100	89.815	ENSCATG00000029173	SLBP	91	89.815	Cercocebus_atys
ENSDORG00000003028	Slbp	100	93.056	ENSCLAG00000008157	SLBP	81	93.056	Chinchilla_lanigera
ENSDORG00000003028	Slbp	100	71.946	ENSCSAG00000015628	SLBP	79	72.398	Chlorocebus_sabaeus
ENSDORG00000003028	Slbp	100	81.567	ENSCPBG00000000746	SLBP	77	80.645	Chrysemys_picta_bellii
ENSDORG00000003028	Slbp	100	89.352	ENSCANG00000041008	SLBP	100	89.352	Colobus_angolensis_palliatus
ENSDORG00000003028	Slbp	100	92.130	ENSCGRG00001009760	-	79	92.130	Cricetulus_griseus_chok1gshd
ENSDORG00000003028	Slbp	100	91.204	ENSCGRG00001012991	-	80	91.204	Cricetulus_griseus_chok1gshd
ENSDORG00000003028	Slbp	100	92.130	ENSCGRG00000004506	Slbp	79	92.130	Cricetulus_griseus_crigri
ENSDORG00000003028	Slbp	91	67.532	ENSCSEG00000020337	-	59	60.976	Cynoglossus_semilaevis
ENSDORG00000003028	Slbp	93	60.588	ENSCVAG00000019592	-	62	56.627	Cyprinodon_variegatus
ENSDORG00000003028	Slbp	93	62.821	ENSDARG00000100558	slbp	57	61.644	Danio_rerio
ENSDORG00000003028	Slbp	100	85.648	ENSDNOG00000047539	SLBP	78	85.648	Dasypus_novemcinctus
ENSDORG00000003028	Slbp	93	92.053	ENSETEG00000004641	SLBP	76	90.960	Echinops_telfairi
ENSDORG00000003028	Slbp	89	92.188	ENSEASG00005022714	SLBP	100	92.188	Equus_asinus_asinus
ENSDORG00000003028	Slbp	98	92.405	ENSECAG00000011689	SLBP	52	92.405	Equus_caballus
ENSDORG00000003028	Slbp	92	63.087	ENSELUG00000012854	slbp	74	50.971	Esox_lucius
ENSDORG00000003028	Slbp	100	93.519	ENSFCAG00000000169	SLBP	92	93.519	Felis_catus
ENSDORG00000003028	Slbp	100	78.802	ENSFALG00000010003	-	78	76.959	Ficedula_albicollis
ENSDORG00000003028	Slbp	100	91.204	ENSFDAG00000007592	SLBP	85	91.204	Fukomys_damarensis
ENSDORG00000003028	Slbp	89	61.224	ENSFHEG00000007497	slbp	65	56.471	Fundulus_heteroclitus
ENSDORG00000003028	Slbp	93	68.153	ENSGMOG00000015352	slbp	100	63.057	Gadus_morhua
ENSDORG00000003028	Slbp	100	79.724	ENSGALG00000015712	SLBP	78	77.880	Gallus_gallus
ENSDORG00000003028	Slbp	90	64.052	ENSGAFG00000019577	slbp	57	61.074	Gambusia_affinis
ENSDORG00000003028	Slbp	91	63.636	ENSGACG00000019596	slbp	61	60.000	Gasterosteus_aculeatus
ENSDORG00000003028	Slbp	92	83.893	ENSGAGG00000012096	SLBP	64	83.019	Gopherus_agassizii
ENSDORG00000003028	Slbp	100	89.815	ENSGGOG00000003167	SLBP	91	89.815	Gorilla_gorilla
ENSDORG00000003028	Slbp	91	66.234	ENSHBUG00000003338	-	54	62.667	Haplochromis_burtoni
ENSDORG00000003028	Slbp	100	88.265	ENSHGLG00000008313	-	80	88.265	Heterocephalus_glaber_female
ENSDORG00000003028	Slbp	100	85.572	ENSHGLG00000010461	-	84	85.572	Heterocephalus_glaber_female
ENSDORG00000003028	Slbp	91	88.832	ENSHGLG00000005955	-	82	88.832	Heterocephalus_glaber_female
ENSDORG00000003028	Slbp	100	89.286	ENSHGLG00100010510	-	80	89.286	Heterocephalus_glaber_male
ENSDORG00000003028	Slbp	100	91.204	ENSHGLG00100014018	-	79	91.204	Heterocephalus_glaber_male
ENSDORG00000003028	Slbp	100	85.572	ENSHGLG00100014906	-	84	85.572	Heterocephalus_glaber_male
ENSDORG00000003028	Slbp	94	61.875	ENSHCOG00000013425	slbp	58	57.862	Hippocampus_comes
ENSDORG00000003028	Slbp	92	68.212	ENSIPUG00000016780	slbp	61	65.217	Ictalurus_punctatus
ENSDORG00000003028	Slbp	100	94.444	ENSSTOG00000003262	SLBP	79	94.444	Ictidomys_tridecemlineatus
ENSDORG00000003028	Slbp	100	92.347	ENSJJAG00000020549	-	79	92.130	Jaculus_jaculus
ENSDORG00000003028	Slbp	100	86.574	ENSJJAG00000002394	-	78	90.741	Jaculus_jaculus
ENSDORG00000003028	Slbp	90	64.052	ENSKMAG00000008187	slbp	53	61.074	Kryptolebias_marmoratus
ENSDORG00000003028	Slbp	91	66.234	ENSLBEG00000024709	slbp	59	57.927	Labrus_bergylta
ENSDORG00000003028	Slbp	96	67.089	ENSLACG00000014623	SLBP	75	60.952	Latimeria_chalumnae
ENSDORG00000003028	Slbp	92	67.114	ENSLOCG00000011027	slbp	73	53.881	Lepisosteus_oculatus
ENSDORG00000003028	Slbp	93	93.377	ENSLAFG00000012933	SLBP	76	93.220	Loxodonta_africana
ENSDORG00000003028	Slbp	100	89.815	ENSMFAG00000030130	SLBP	83	84.772	Macaca_fascicularis
ENSDORG00000003028	Slbp	100	89.815	ENSMMUG00000032303	SLBP	95	89.815	Macaca_mulatta
ENSDORG00000003028	Slbp	100	65.471	ENSMNEG00000008082	SLBP	74	65.471	Macaca_nemestrina
ENSDORG00000003028	Slbp	100	89.815	ENSMLEG00000024639	SLBP	86	89.815	Mandrillus_leucophaeus
ENSDORG00000003028	Slbp	91	62.338	ENSMAMG00000001046	-	58	56.098	Mastacembelus_armatus
ENSDORG00000003028	Slbp	91	66.234	ENSMZEG00005017261	-	54	62.667	Maylandia_zebra
ENSDORG00000003028	Slbp	100	79.263	ENSMGAG00000013085	SLBP	100	77.419	Meleagris_gallopavo
ENSDORG00000003028	Slbp	100	91.667	ENSMAUG00000009490	Slbp	79	91.667	Mesocricetus_auratus
ENSDORG00000003028	Slbp	100	87.963	ENSMICG00000014244	SLBP	91	87.963	Microcebus_murinus
ENSDORG00000003028	Slbp	100	90.741	ENSMOCG00000015826	Slbp	78	90.741	Microtus_ochrogaster
ENSDORG00000003028	Slbp	99	61.905	ENSMMOG00000010181	slbp	67	59.146	Mola_mola
ENSDORG00000003028	Slbp	100	85.185	ENSMODG00000004304	SLBP	83	85.185	Monodelphis_domestica
ENSDORG00000003028	Slbp	100	92.130	MGP_CAROLIEiJ_G0027117	Slbp	79	92.130	Mus_caroli
ENSDORG00000003028	Slbp	100	92.593	ENSMUSG00000004642	Slbp	79	92.593	Mus_musculus
ENSDORG00000003028	Slbp	100	92.593	MGP_PahariEiJ_G0016901	Slbp	79	92.593	Mus_pahari
ENSDORG00000003028	Slbp	100	92.593	MGP_SPRETEiJ_G0028113	Slbp	79	92.593	Mus_spretus
ENSDORG00000003028	Slbp	85	91.304	ENSMPUG00000011139	SLBP	94	91.304	Mustela_putorius_furo
ENSDORG00000003028	Slbp	100	87.097	ENSMLUG00000004425	SLBP	93	87.097	Myotis_lucifugus
ENSDORG00000003028	Slbp	100	89.352	ENSNGAG00000020799	Slbp	79	89.352	Nannospalax_galili
ENSDORG00000003028	Slbp	91	66.887	ENSNBRG00000006044	-	56	62.667	Neolamprologus_brichardi
ENSDORG00000003028	Slbp	100	89.815	ENSNLEG00000000048	SLBP	91	89.815	Nomascus_leucogenys
ENSDORG00000003028	Slbp	93	88.079	ENSMEUG00000002501	SLBP	100	87.640	Notamacropus_eugenii
ENSDORG00000003028	Slbp	100	92.130	ENSODEG00000012641	SLBP	82	92.130	Octodon_degus
ENSDORG00000003028	Slbp	91	66.883	ENSONIG00000017469	-	54	63.333	Oreochromis_niloticus
ENSDORG00000003028	Slbp	100	87.037	ENSOANG00000014243	SLBP	94	87.037	Ornithorhynchus_anatinus
ENSDORG00000003028	Slbp	90	62.745	ENSORLG00000024887	-	60	55.556	Oryzias_latipes
ENSDORG00000003028	Slbp	90	62.745	ENSORLG00020007798	slbp	62	55.556	Oryzias_latipes_hni
ENSDORG00000003028	Slbp	90	62.745	ENSORLG00015016656	slbp	61	55.556	Oryzias_latipes_hsok
ENSDORG00000003028	Slbp	98	60.479	ENSOMEG00000010818	slbp	62	55.828	Oryzias_melastigma
ENSDORG00000003028	Slbp	100	87.963	ENSOGAG00000009750	SLBP	78	87.963	Otolemur_garnettii
ENSDORG00000003028	Slbp	100	90.741	ENSOARG00000016090	SLBP	99	90.741	Ovis_aries
ENSDORG00000003028	Slbp	100	89.815	ENSPPAG00000033300	SLBP	91	89.815	Pan_paniscus
ENSDORG00000003028	Slbp	100	93.056	ENSPPRG00000016897	SLBP	86	93.056	Panthera_pardus
ENSDORG00000003028	Slbp	89	93.750	ENSPTIG00000015057	SLBP	100	93.750	Panthera_tigris_altaica
ENSDORG00000003028	Slbp	100	89.815	ENSPTRG00000015832	SLBP	91	89.815	Pan_troglodytes
ENSDORG00000003028	Slbp	100	89.815	ENSPANG00000004932	SLBP	91	89.815	Papio_anubis
ENSDORG00000003028	Slbp	92	66.443	ENSPKIG00000006183	slbp	74	53.456	Paramormyrops_kingsleyae
ENSDORG00000003028	Slbp	99	58.235	ENSPMGG00000017684	-	84	55.030	Periophthalmus_magnuspinnatus
ENSDORG00000003028	Slbp	100	92.130	ENSPEMG00000018369	Slbp	79	92.130	Peromyscus_maniculatus_bairdii
ENSDORG00000003028	Slbp	54	69.318	ENSPMAG00000003029	SLBP	88	65.657	Petromyzon_marinus
ENSDORG00000003028	Slbp	100	87.500	ENSPCIG00000013575	SLBP	63	87.500	Phascolarctos_cinereus
ENSDORG00000003028	Slbp	90	64.052	ENSPFOG00000000462	slbp	54	61.074	Poecilia_formosa
ENSDORG00000003028	Slbp	90	64.052	ENSPLAG00000008300	slbp	56	60.403	Poecilia_latipinna
ENSDORG00000003028	Slbp	90	64.052	ENSPMEG00000020807	slbp	54	61.074	Poecilia_mexicana
ENSDORG00000003028	Slbp	90	64.052	ENSPREG00000004561	slbp	54	61.074	Poecilia_reticulata
ENSDORG00000003028	Slbp	100	89.352	ENSPPYG00000014529	SLBP	78	89.352	Pongo_abelii
ENSDORG00000003028	Slbp	100	88.426	ENSPCOG00000017399	SLBP	91	88.426	Propithecus_coquereli
ENSDORG00000003028	Slbp	100	88.889	ENSPVAG00000002807	SLBP	83	88.889	Pteropus_vampyrus
ENSDORG00000003028	Slbp	91	66.234	ENSPNYG00000005451	-	54	62.667	Pundamilia_nyererei
ENSDORG00000003028	Slbp	98	66.875	ENSPNAG00000018503	slbp	60	62.500	Pygocentrus_nattereri
ENSDORG00000003028	Slbp	100	92.130	ENSRNOG00000037162	Slbp	79	92.130	Rattus_norvegicus
ENSDORG00000003028	Slbp	100	89.815	ENSRBIG00000039159	SLBP	91	89.815	Rhinopithecus_bieti
ENSDORG00000003028	Slbp	100	89.815	ENSRROG00000030081	SLBP	89	84.772	Rhinopithecus_roxellana
ENSDORG00000003028	Slbp	89	88.021	ENSSBOG00000033897	SLBP	100	88.021	Saimiri_boliviensis_boliviensis
ENSDORG00000003028	Slbp	100	86.574	ENSSHAG00000013939	SLBP	73	86.574	Sarcophilus_harrisii
ENSDORG00000003028	Slbp	92	70.667	ENSSFOG00015019429	slbp	58	65.409	Scleropages_formosus
ENSDORG00000003028	Slbp	87	64.138	ENSSMAG00000016028	-	57	56.098	Scophthalmus_maximus
ENSDORG00000003028	Slbp	91	63.636	ENSSDUG00000000855	-	59	57.317	Seriola_dumerili
ENSDORG00000003028	Slbp	62	56.481	ENSSLDG00000022893	-	61	51.923	Seriola_lalandi_dorsalis
ENSDORG00000003028	Slbp	93	78.808	ENSSPUG00000016007	SLBP	82	70.833	Sphenodon_punctatus
ENSDORG00000003028	Slbp	91	64.286	ENSSPAG00000004021	slbp	63	58.537	Stegastes_partitus
ENSDORG00000003028	Slbp	100	88.426	ENSSSCG00000008676	SLBP	79	88.426	Sus_scrofa
ENSDORG00000003028	Slbp	99	78.704	ENSTGUG00000010626	-	83	76.959	Taeniopygia_guttata
ENSDORG00000003028	Slbp	91	65.806	ENSTRUG00000000688	slbp	55	62.914	Takifugu_rubripes
ENSDORG00000003028	Slbp	84	63.571	ENSTNIG00000000484	-	68	58.491	Tetraodon_nigroviridis
ENSDORG00000003028	Slbp	100	68.981	ENSTBEG00000004085	SLBP	86	68.981	Tupaia_belangeri
ENSDORG00000003028	Slbp	100	91.204	ENSTTRG00000010901	-	100	91.204	Tursiops_truncatus
ENSDORG00000003028	Slbp	93	86.093	ENSTTRG00000004010	-	100	86.517	Tursiops_truncatus
ENSDORG00000003028	Slbp	100	92.130	ENSUAMG00000012990	SLBP	78	92.130	Ursus_americanus
ENSDORG00000003028	Slbp	89	92.188	ENSUMAG00000006119	SLBP	100	92.188	Ursus_maritimus
ENSDORG00000003028	Slbp	100	90.741	ENSVVUG00000015578	-	79	90.741	Vulpes_vulpes
ENSDORG00000003028	Slbp	96	66.879	ENSXETG00000003876	slbp	74	60.577	Xenopus_tropicalis
ENSDORG00000003028	Slbp	90	64.706	ENSXCOG00000008275	slbp	66	56.395	Xiphophorus_couchianus
ENSDORG00000003028	Slbp	90	64.052	ENSXMAG00000001331	-	62	55.814	Xiphophorus_maculatus