EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000003386 (Gene tree)
Gene ID: 105992063
Gene Symbol: Tnrc6b
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 163377 bases
Position: chrKN672425.1:2003634-2167010
Accession: 105992063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000027022	Ago_hook	PF10427.9	2.9e-20	1	1
ENSDORP00000003166	Ago_hook	PF10427.9	3.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000003386	-	5427	XM_013024871	ENSDORP00000003166	1808 (aa)	XP_012880325	A0A1S3FVC0
ENSDORT00000031274	-	5370	-	ENSDORP00000027022	1789 (aa)	-	UPI000BAD165F

Gene Model

Click here to download ENSDORG00000003386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000003386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000003386	Tnrc6b	64	38.124	ENSDORG00000004558	Tnrc6c	99	34.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000003386	Tnrc6b	97	96.803	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSDORG00000003386	Tnrc6b	99	95.917	ENSAMEG00000011025	TNRC6B	99	93.993	Ailuropoda_melanoleuca
ENSDORG00000003386	Tnrc6b	96	85.388	ENSAPLG00000009347	TNRC6B	100	85.388	Anas_platyrhynchos
ENSDORG00000003386	Tnrc6b	97	73.397	ENSACAG00000007281	TNRC6B	99	73.453	Anolis_carolinensis
ENSDORG00000003386	Tnrc6b	97	96.536	ENSANAG00000035042	TNRC6B	100	97.384	Aotus_nancymaae
ENSDORG00000003386	Tnrc6b	84	47.474	ENSAMXG00000008707	tnrc6b	97	44.567	Astyanax_mexicanus
ENSDORG00000003386	Tnrc6b	98	95.110	ENSBTAG00000021076	TNRC6B	99	95.195	Bos_taurus
ENSDORG00000003386	Tnrc6b	97	96.181	ENSCJAG00000002732	TNRC6B	99	99.155	Callithrix_jacchus
ENSDORG00000003386	Tnrc6b	97	95.915	ENSCAFG00000001255	TNRC6B	100	93.270	Canis_familiaris
ENSDORG00000003386	Tnrc6b	99	96.329	ENSCAFG00020002189	TNRC6B	99	96.329	Canis_lupus_dingo
ENSDORG00000003386	Tnrc6b	99	95.206	ENSCHIG00000003491	TNRC6B	100	95.541	Capra_hircus
ENSDORG00000003386	Tnrc6b	97	95.852	ENSTSYG00000011836	TNRC6B	100	97.027	Carlito_syrichta
ENSDORG00000003386	Tnrc6b	100	96.694	ENSCPOG00000005705	TNRC6B	100	96.694	Cavia_porcellus
ENSDORG00000003386	Tnrc6b	97	96.714	ENSCCAG00000019912	TNRC6B	100	94.530	Cebus_capucinus
ENSDORG00000003386	Tnrc6b	97	96.448	ENSCATG00000029291	TNRC6B	100	96.200	Cercocebus_atys
ENSDORG00000003386	Tnrc6b	100	96.911	ENSCLAG00000016942	TNRC6B	100	96.911	Chinchilla_lanigera
ENSDORG00000003386	Tnrc6b	97	93.092	ENSCSAG00000006021	TNRC6B	99	93.092	Chlorocebus_sabaeus
ENSDORG00000003386	Tnrc6b	89	85.501	ENSCPBG00000022932	TNRC6B	99	85.322	Chrysemys_picta_bellii
ENSDORG00000003386	Tnrc6b	97	96.359	ENSCANG00000030776	TNRC6B	100	96.912	Colobus_angolensis_palliatus
ENSDORG00000003386	Tnrc6b	96	96.048	ENSCGRG00001020166	Tnrc6b	99	96.048	Cricetulus_griseus_chok1gshd
ENSDORG00000003386	Tnrc6b	100	96.029	ENSCGRG00000016696	Tnrc6b	99	96.002	Cricetulus_griseus_crigri
ENSDORG00000003386	Tnrc6b	100	94.873	ENSDNOG00000012744	TNRC6B	100	95.089	Dasypus_novemcinctus
ENSDORG00000003386	Tnrc6b	97	84.476	ENSETEG00000006570	TNRC6B	99	85.099	Echinops_telfairi
ENSDORG00000003386	Tnrc6b	100	96.135	ENSEASG00005005306	TNRC6B	100	96.135	Equus_asinus_asinus
ENSDORG00000003386	Tnrc6b	100	96.860	ENSECAG00000009759	TNRC6B	100	98.500	Equus_caballus
ENSDORG00000003386	Tnrc6b	57	97.345	ENSEEUG00000008690	-	59	97.070	Erinaceus_europaeus
ENSDORG00000003386	Tnrc6b	100	96.207	ENSFCAG00000004791	TNRC6B	100	96.207	Felis_catus
ENSDORG00000003386	Tnrc6b	93	88.090	ENSFALG00000012195	TNRC6B	100	87.854	Ficedula_albicollis
ENSDORG00000003386	Tnrc6b	100	97.461	ENSFDAG00000021368	TNRC6B	100	97.461	Fukomys_damarensis
ENSDORG00000003386	Tnrc6b	97	88.644	ENSGALG00000012050	TNRC6B	97	88.418	Gallus_gallus
ENSDORG00000003386	Tnrc6b	97	87.944	ENSGAGG00000025188	TNRC6B	98	87.718	Gopherus_agassizii
ENSDORG00000003386	Tnrc6b	97	96.803	ENSGGOG00000008444	TNRC6B	100	97.741	Gorilla_gorilla
ENSDORG00000003386	Tnrc6b	100	96.806	ENSHGLG00000009306	TNRC6B	100	96.806	Heterocephalus_glaber_female
ENSDORG00000003386	Tnrc6b	100	97.179	ENSHGLG00100018108	TNRC6B	100	97.179	Heterocephalus_glaber_male
ENSDORG00000003386	Tnrc6b	80	43.760	ENSIPUG00000001515	tnrc6b	94	45.589	Ictalurus_punctatus
ENSDORG00000003386	Tnrc6b	100	97.511	ENSSTOG00000008927	TNRC6B	100	97.511	Ictidomys_tridecemlineatus
ENSDORG00000003386	Tnrc6b	100	95.859	ENSJJAG00000015779	Tnrc6b	100	95.859	Jaculus_jaculus
ENSDORG00000003386	Tnrc6b	98	61.863	ENSLACG00000000628	-	99	62.225	Latimeria_chalumnae
ENSDORG00000003386	Tnrc6b	76	94.902	ENSLAFG00000014473	TNRC6B	100	95.173	Loxodonta_africana
ENSDORG00000003386	Tnrc6b	97	96.536	ENSMFAG00000003862	TNRC6B	100	96.200	Macaca_fascicularis
ENSDORG00000003386	Tnrc6b	100	97.077	ENSMMUG00000021345	TNRC6B	100	97.268	Macaca_mulatta
ENSDORG00000003386	Tnrc6b	97	96.941	ENSMNEG00000042745	TNRC6B	100	96.941	Macaca_nemestrina
ENSDORG00000003386	Tnrc6b	97	96.536	ENSMLEG00000041780	TNRC6B	100	97.268	Mandrillus_leucophaeus
ENSDORG00000003386	Tnrc6b	98	86.567	ENSMGAG00000012333	TNRC6B	98	86.470	Meleagris_gallopavo
ENSDORG00000003386	Tnrc6b	100	95.091	ENSMAUG00000016123	Tnrc6b	100	95.091	Mesocricetus_auratus
ENSDORG00000003386	Tnrc6b	99	94.795	ENSMICG00000014056	TNRC6B	100	96.718	Microcebus_murinus
ENSDORG00000003386	Tnrc6b	97	95.000	ENSMOCG00000020334	Tnrc6b	100	95.029	Microtus_ochrogaster
ENSDORG00000003386	Tnrc6b	100	96.139	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	96.139	Mus_caroli
ENSDORG00000003386	Tnrc6b	100	95.367	ENSMUSG00000047888	Tnrc6b	100	95.698	Mus_musculus
ENSDORG00000003386	Tnrc6b	100	95.088	MGP_PahariEiJ_G0020045	Tnrc6b	100	95.419	Mus_pahari
ENSDORG00000003386	Tnrc6b	100	96.194	MGP_SPRETEiJ_G0020941	Tnrc6b	100	96.194	Mus_spretus
ENSDORG00000003386	Tnrc6b	95	97.519	ENSMPUG00000016442	TNRC6B	92	97.706	Mustela_putorius_furo
ENSDORG00000003386	Tnrc6b	97	94.849	ENSMLUG00000008765	TNRC6B	98	92.826	Myotis_lucifugus
ENSDORG00000003386	Tnrc6b	100	95.978	ENSNGAG00000021294	Tnrc6b	100	95.978	Nannospalax_galili
ENSDORG00000003386	Tnrc6b	86	95.446	ENSNLEG00000015311	TNRC6B	100	97.741	Nomascus_leucogenys
ENSDORG00000003386	Tnrc6b	91	86.483	ENSOPRG00000012054	TNRC6B	88	92.140	Ochotona_princeps
ENSDORG00000003386	Tnrc6b	100	97.299	ENSODEG00000013146	TNRC6B	100	97.299	Octodon_degus
ENSDORG00000003386	Tnrc6b	91	46.472	ENSONIG00000019679	-	99	41.399	Oreochromis_niloticus
ENSDORG00000003386	Tnrc6b	100	95.861	ENSOCUG00000016128	TNRC6B	100	95.861	Oryctolagus_cuniculus
ENSDORG00000003386	Tnrc6b	98	91.885	ENSOGAG00000011096	TNRC6B	99	91.408	Otolemur_garnettii
ENSDORG00000003386	Tnrc6b	100	95.230	ENSOARG00000017238	TNRC6B	100	95.230	Ovis_aries
ENSDORG00000003386	Tnrc6b	97	96.714	ENSPPAG00000028514	TNRC6B	100	97.622	Pan_paniscus
ENSDORG00000003386	Tnrc6b	97	95.560	ENSPPRG00000017741	TNRC6B	100	95.597	Panthera_pardus
ENSDORG00000003386	Tnrc6b	97	93.192	ENSPTIG00000022064	TNRC6B	96	93.363	Panthera_tigris_altaica
ENSDORG00000003386	Tnrc6b	97	96.625	ENSPTRG00000047826	TNRC6B	100	97.503	Pan_troglodytes
ENSDORG00000003386	Tnrc6b	96	89.412	ENSPANG00000009271	TNRC6B	99	91.129	Papio_anubis
ENSDORG00000003386	Tnrc6b	97	87.824	ENSPSIG00000005318	TNRC6B	99	87.655	Pelodiscus_sinensis
ENSDORG00000003386	Tnrc6b	100	95.925	ENSPEMG00000011403	Tnrc6b	100	95.925	Peromyscus_maniculatus_bairdii
ENSDORG00000003386	Tnrc6b	97	86.910	ENSPCIG00000020347	TNRC6B	99	86.853	Phascolarctos_cinereus
ENSDORG00000003386	Tnrc6b	67	46.365	ENSPFOG00000006033	-	91	48.534	Poecilia_formosa
ENSDORG00000003386	Tnrc6b	97	93.824	ENSPPYG00000011849	TNRC6B	99	94.085	Pongo_abelii
ENSDORG00000003386	Tnrc6b	74	89.174	ENSPCAG00000008739	TNRC6B	76	89.834	Procavia_capensis
ENSDORG00000003386	Tnrc6b	99	95.267	ENSPCOG00000020790	TNRC6B	100	96.801	Propithecus_coquereli
ENSDORG00000003386	Tnrc6b	93	96.220	ENSPVAG00000004975	TNRC6B	94	96.220	Pteropus_vampyrus
ENSDORG00000003386	Tnrc6b	63	48.232	ENSPNAG00000011713	tnrc6b	79	44.496	Pygocentrus_nattereri
ENSDORG00000003386	Tnrc6b	100	95.222	ENSRNOG00000024907	Tnrc6b	100	95.167	Rattus_norvegicus
ENSDORG00000003386	Tnrc6b	97	96.181	ENSRBIG00000035576	TNRC6B	99	97.031	Rhinopithecus_bieti
ENSDORG00000003386	Tnrc6b	97	96.771	ENSRROG00000031135	TNRC6B	100	97.031	Rhinopithecus_roxellana
ENSDORG00000003386	Tnrc6b	95	96.612	ENSSBOG00000029743	TNRC6B	100	94.334	Saimiri_boliviensis_boliviensis
ENSDORG00000003386	Tnrc6b	97	86.470	ENSSHAG00000009692	TNRC6B	98	86.625	Sarcophilus_harrisii
ENSDORG00000003386	Tnrc6b	66	85.593	ENSSARG00000007971	-	70	85.593	Sorex_araneus
ENSDORG00000003386	Tnrc6b	89	86.427	ENSSPUG00000010801	TNRC6B	98	86.427	Sphenodon_punctatus
ENSDORG00000003386	Tnrc6b	100	96.192	ENSSSCG00000000078	TNRC6B	99	96.056	Sus_scrofa
ENSDORG00000003386	Tnrc6b	91	84.662	ENSTGUG00000010138	-	99	84.300	Taeniopygia_guttata
ENSDORG00000003386	Tnrc6b	100	90.342	ENSTTRG00000011465	TNRC6B	94	98.131	Tursiops_truncatus
ENSDORG00000003386	Tnrc6b	100	94.914	ENSUAMG00000007174	TNRC6B	98	96.492	Ursus_americanus
ENSDORG00000003386	Tnrc6b	97	96.544	ENSUMAG00000014336	TNRC6B	100	96.544	Ursus_maritimus
ENSDORG00000003386	Tnrc6b	68	91.313	ENSVPAG00000001467	TNRC6B	75	90.101	Vicugna_pacos
ENSDORG00000003386	Tnrc6b	100	96.586	ENSVVUG00000007064	TNRC6B	100	96.544	Vulpes_vulpes