EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000003399 (Gene tree)
Gene ID: 105984326
Gene Symbol: Ddx54
Alias: 2410015A15Rik|APR-5|DP97
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 7260 bases
Position: chrKN672369.1:11592279-11599538
Accession: 105984326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000003179	DBP10CT	PF08147.12	4.4e-18	1	1
ENSDORP00000003179	DEAD	PF00270.29	4.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000003399	-	2169	XM_013014484	ENSDORP00000003179	722 (aa)	XP_012869938	UPI000BAD12B6

Gene Model

Click here to download ENSDORG00000003399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000003399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000003399	Ddx54	95	82.386	ENSG00000123064	DDX54	80	83.097	Homo_sapiens
ENSDORG00000003399	Ddx54	93	57.349	ENSAPOG00000008602	ddx54	82	57.123	Acanthochromis_polyacanthus
ENSDORG00000003399	Ddx54	95	84.046	ENSAMEG00000008775	DDX54	80	84.046	Ailuropoda_melanoleuca
ENSDORG00000003399	Ddx54	95	56.516	ENSACIG00000019104	ddx54	81	55.899	Amphilophus_citrinellus
ENSDORG00000003399	Ddx54	93	56.115	ENSAOCG00000008449	ddx54	82	56.559	Amphiprion_ocellaris
ENSDORG00000003399	Ddx54	93	56.115	ENSAPEG00000014287	ddx54	82	56.559	Amphiprion_percula
ENSDORG00000003399	Ddx54	95	55.493	ENSATEG00000018529	ddx54	82	54.986	Anabas_testudineus
ENSDORG00000003399	Ddx54	95	67.816	ENSAPLG00000013191	DDX54	86	68.534	Anas_platyrhynchos
ENSDORG00000003399	Ddx54	95	63.688	ENSACAG00000004703	DDX54	83	63.546	Anolis_carolinensis
ENSDORG00000003399	Ddx54	94	81.178	ENSANAG00000032761	-	79	81.268	Aotus_nancymaae
ENSDORG00000003399	Ddx54	95	74.750	ENSANAG00000032241	-	86	74.322	Aotus_nancymaae
ENSDORG00000003399	Ddx54	95	56.454	ENSACLG00000013176	ddx54	82	56.188	Astatotilapia_calliptera
ENSDORG00000003399	Ddx54	95	54.812	ENSAMXG00000009189	ddx54	81	55.603	Astyanax_mexicanus
ENSDORG00000003399	Ddx54	95	83.429	ENSBTAG00000011930	DDX54	75	84.429	Bos_taurus
ENSDORG00000003399	Ddx54	86	42.326	WBGene00022378	Y94H6A.5	77	42.049	Caenorhabditis_elegans
ENSDORG00000003399	Ddx54	87	83.072	ENSCJAG00000010039	DDX54	69	82.445	Callithrix_jacchus
ENSDORG00000003399	Ddx54	78	83.363	ENSCAFG00000009029	DDX54	99	83.012	Canis_familiaris
ENSDORG00000003399	Ddx54	95	83.048	ENSCAFG00020017643	DDX54	80	83.048	Canis_lupus_dingo
ENSDORG00000003399	Ddx54	94	85.174	ENSCHIG00000026798	DDX54	79	85.029	Capra_hircus
ENSDORG00000003399	Ddx54	95	80.114	ENSTSYG00000007898	DDX54	80	80.114	Carlito_syrichta
ENSDORG00000003399	Ddx54	95	81.143	ENSCAPG00000001482	DDX54	81	81.007	Cavia_aperea
ENSDORG00000003399	Ddx54	95	83.761	ENSCPOG00000020649	DDX54	80	83.191	Cavia_porcellus
ENSDORG00000003399	Ddx54	95	84.451	ENSCCAG00000022625	DDX54	80	84.451	Cebus_capucinus
ENSDORG00000003399	Ddx54	95	83.262	ENSCATG00000041943	DDX54	80	83.262	Cercocebus_atys
ENSDORG00000003399	Ddx54	95	82.143	ENSCLAG00000010748	DDX54	80	82.446	Chinchilla_lanigera
ENSDORG00000003399	Ddx54	95	82.163	ENSCSAG00000002432	DDX54	78	82.303	Chlorocebus_sabaeus
ENSDORG00000003399	Ddx54	90	66.163	ENSCPBG00000017982	DDX54	85	66.820	Chrysemys_picta_bellii
ENSDORG00000003399	Ddx54	85	48.730	ENSCING00000004789	-	78	47.975	Ciona_intestinalis
ENSDORG00000003399	Ddx54	88	47.385	ENSCSAVG00000008916	-	66	65.471	Ciona_savignyi
ENSDORG00000003399	Ddx54	89	79.487	ENSCANG00000020637	DDX54	84	80.586	Colobus_angolensis_palliatus
ENSDORG00000003399	Ddx54	95	83.381	ENSCGRG00001014803	Ddx54	80	83.381	Cricetulus_griseus_chok1gshd
ENSDORG00000003399	Ddx54	95	83.143	ENSCGRG00000002827	Ddx54	80	83.143	Cricetulus_griseus_crigri
ENSDORG00000003399	Ddx54	93	54.690	ENSCSEG00000016462	ddx54	82	54.852	Cynoglossus_semilaevis
ENSDORG00000003399	Ddx54	92	56.975	ENSCVAG00000022404	ddx54	78	56.681	Cyprinodon_variegatus
ENSDORG00000003399	Ddx54	95	57.042	ENSDARG00000105286	ddx54	82	57.525	Danio_rerio
ENSDORG00000003399	Ddx54	95	82.328	ENSDNOG00000032913	DDX54	80	82.328	Dasypus_novemcinctus
ENSDORG00000003399	Ddx54	90	38.295	FBgn0052344	CG32344	71	41.283	Drosophila_melanogaster
ENSDORG00000003399	Ddx54	71	57.558	ENSEBUG00000008886	ddx54	72	57.558	Eptatretus_burgeri
ENSDORG00000003399	Ddx54	91	84.954	ENSEASG00005009501	DDX54	95	73.421	Equus_asinus_asinus
ENSDORG00000003399	Ddx54	95	83.215	ENSECAG00000012890	DDX54	80	83.357	Equus_caballus
ENSDORG00000003399	Ddx54	62	93.750	ENSEEUG00000008296	-	53	93.750	Erinaceus_europaeus
ENSDORG00000003399	Ddx54	95	55.325	ENSELUG00000013533	ddx54	82	55.740	Esox_lucius
ENSDORG00000003399	Ddx54	95	83.714	ENSFCAG00000027806	DDX54	80	84.000	Felis_catus
ENSDORG00000003399	Ddx54	98	64.924	ENSFALG00000007737	DDX54	90	64.779	Ficedula_albicollis
ENSDORG00000003399	Ddx54	95	63.558	ENSFDAG00000019953	DDX54	78	64.132	Fukomys_damarensis
ENSDORG00000003399	Ddx54	92	56.851	ENSFHEG00000018425	ddx54	78	56.176	Fundulus_heteroclitus
ENSDORG00000003399	Ddx54	88	56.899	ENSGMOG00000011746	ddx54	77	57.143	Gadus_morhua
ENSDORG00000003399	Ddx54	99	64.865	ENSGALG00000007490	DDX54	87	64.986	Gallus_gallus
ENSDORG00000003399	Ddx54	92	55.506	ENSGAFG00000010336	ddx54	77	55.506	Gambusia_affinis
ENSDORG00000003399	Ddx54	95	53.224	ENSGACG00000016793	ddx54	82	53.581	Gasterosteus_aculeatus
ENSDORG00000003399	Ddx54	95	64.530	ENSGAGG00000022803	DDX54	87	64.103	Gopherus_agassizii
ENSDORG00000003399	Ddx54	93	84.795	ENSGGOG00000010414	DDX54	78	85.526	Gorilla_gorilla
ENSDORG00000003399	Ddx54	95	83.286	ENSHGLG00000014411	DDX54	80	83.143	Heterocephalus_glaber_female
ENSDORG00000003399	Ddx54	95	83.262	ENSHGLG00100018511	DDX54	80	83.119	Heterocephalus_glaber_male
ENSDORG00000003399	Ddx54	92	57.879	ENSHCOG00000019287	ddx54	78	57.726	Hippocampus_comes
ENSDORG00000003399	Ddx54	95	55.650	ENSIPUG00000015556	Ddx54	82	55.791	Ictalurus_punctatus
ENSDORG00000003399	Ddx54	95	83.621	ENSSTOG00000004068	DDX54	91	83.616	Ictidomys_tridecemlineatus
ENSDORG00000003399	Ddx54	95	84.362	ENSJJAG00000015712	Ddx54	80	84.648	Jaculus_jaculus
ENSDORG00000003399	Ddx54	92	57.522	ENSKMAG00000017520	ddx54	78	57.292	Kryptolebias_marmoratus
ENSDORG00000003399	Ddx54	95	54.735	ENSLBEG00000019480	ddx54	82	54.533	Labrus_bergylta
ENSDORG00000003399	Ddx54	93	60.870	ENSLACG00000008944	DDX54	79	60.851	Latimeria_chalumnae
ENSDORG00000003399	Ddx54	95	58.898	ENSLOCG00000008485	ddx54	81	58.714	Lepisosteus_oculatus
ENSDORG00000003399	Ddx54	95	70.233	ENSLAFG00000027782	DDX54	90	70.661	Loxodonta_africana
ENSDORG00000003399	Ddx54	95	83.569	ENSMFAG00000043636	DDX54	78	85.735	Macaca_fascicularis
ENSDORG00000003399	Ddx54	95	82.178	ENSMMUG00000021795	DDX54	80	83.168	Macaca_mulatta
ENSDORG00000003399	Ddx54	95	74.257	ENSMNEG00000043605	DDX54	80	75.248	Macaca_nemestrina
ENSDORG00000003399	Ddx54	95	77.620	ENSMLEG00000038981	DDX54	80	78.754	Mandrillus_leucophaeus
ENSDORG00000003399	Ddx54	95	55.479	ENSMAMG00000012784	ddx54	82	55.540	Mastacembelus_armatus
ENSDORG00000003399	Ddx54	95	55.761	ENSMZEG00005018773	ddx54	81	55.619	Maylandia_zebra
ENSDORG00000003399	Ddx54	99	63.539	ENSMGAG00000009183	DDX54	90	63.137	Meleagris_gallopavo
ENSDORG00000003399	Ddx54	95	83.381	ENSMAUG00000011051	Ddx54	80	83.811	Mesocricetus_auratus
ENSDORG00000003399	Ddx54	95	82.429	ENSMICG00000012217	DDX54	80	84.143	Microcebus_murinus
ENSDORG00000003399	Ddx54	95	83.908	ENSMOCG00000010835	Ddx54	80	83.764	Microtus_ochrogaster
ENSDORG00000003399	Ddx54	93	55.588	ENSMMOG00000009634	ddx54	81	54.571	Mola_mola
ENSDORG00000003399	Ddx54	95	73.132	ENSMODG00000003413	DDX54	83	73.132	Monodelphis_domestica
ENSDORG00000003399	Ddx54	95	56.719	ENSMALG00000022098	ddx54	82	56.860	Monopterus_albus
ENSDORG00000003399	Ddx54	95	83.262	MGP_CAROLIEiJ_G0027665	Ddx54	80	83.119	Mus_caroli
ENSDORG00000003399	Ddx54	95	83.095	ENSMUSG00000029599	Ddx54	80	83.238	Mus_musculus
ENSDORG00000003399	Ddx54	95	83.691	MGP_PahariEiJ_G0024247	Ddx54	80	83.548	Mus_pahari
ENSDORG00000003399	Ddx54	95	83.143	MGP_SPRETEiJ_G0028665	Ddx54	80	83.286	Mus_spretus
ENSDORG00000003399	Ddx54	95	81.481	ENSMPUG00000002574	DDX54	80	82.051	Mustela_putorius_furo
ENSDORG00000003399	Ddx54	56	70.000	ENSMLUG00000026417	-	100	68.873	Myotis_lucifugus
ENSDORG00000003399	Ddx54	53	72.063	ENSMLUG00000025894	-	99	71.802	Myotis_lucifugus
ENSDORG00000003399	Ddx54	57	70.192	ENSMLUG00000029964	-	100	70.192	Myotis_lucifugus
ENSDORG00000003399	Ddx54	95	82.026	ENSNGAG00000021313	Ddx54	80	81.312	Nannospalax_galili
ENSDORG00000003399	Ddx54	59	71.774	ENSNBRG00000005588	ddx54	55	71.774	Neolamprologus_brichardi
ENSDORG00000003399	Ddx54	95	82.596	ENSNLEG00000000162	DDX54	80	83.452	Nomascus_leucogenys
ENSDORG00000003399	Ddx54	85	71.890	ENSMEUG00000015392	DDX54	87	73.623	Notamacropus_eugenii
ENSDORG00000003399	Ddx54	95	75.788	ENSOPRG00000012000	DDX54	80	76.967	Ochotona_princeps
ENSDORG00000003399	Ddx54	93	84.094	ENSODEG00000014863	DDX54	78	83.481	Octodon_degus
ENSDORG00000003399	Ddx54	95	82.270	ENSOCUG00000008932	DDX54	80	82.553	Oryctolagus_cuniculus
ENSDORG00000003399	Ddx54	95	55.241	ENSORLG00000007385	ddx54	81	55.477	Oryzias_latipes
ENSDORG00000003399	Ddx54	95	55.524	ENSORLG00020000858	ddx54	81	55.761	Oryzias_latipes_hni
ENSDORG00000003399	Ddx54	95	54.958	ENSORLG00015006956	ddx54	81	54.843	Oryzias_latipes_hsok
ENSDORG00000003399	Ddx54	93	55.733	ENSOMEG00000003663	ddx54	82	55.824	Oryzias_melastigma
ENSDORG00000003399	Ddx54	95	84.241	ENSOGAG00000004210	DDX54	80	84.670	Otolemur_garnettii
ENSDORG00000003399	Ddx54	95	82.454	ENSOARG00000008363	DDX54	80	82.311	Ovis_aries
ENSDORG00000003399	Ddx54	95	81.638	ENSPPAG00000042178	DDX54	80	82.203	Pan_paniscus
ENSDORG00000003399	Ddx54	95	81.286	ENSPPRG00000005223	DDX54	80	81.598	Panthera_pardus
ENSDORG00000003399	Ddx54	69	62.338	ENSPTIG00000019728	DDX54	51	89.167	Panthera_tigris_altaica
ENSDORG00000003399	Ddx54	95	81.702	ENSPTRG00000005483	DDX54	80	82.837	Pan_troglodytes
ENSDORG00000003399	Ddx54	95	82.037	ENSPANG00000008883	DDX54	80	83.027	Papio_anubis
ENSDORG00000003399	Ddx54	95	57.021	ENSPKIG00000018272	ddx54	80	57.730	Paramormyrops_kingsleyae
ENSDORG00000003399	Ddx54	94	53.226	ENSPMGG00000010988	ddx54	83	52.984	Periophthalmus_magnuspinnatus
ENSDORG00000003399	Ddx54	95	84.814	ENSPEMG00000016701	Ddx54	80	84.814	Peromyscus_maniculatus_bairdii
ENSDORG00000003399	Ddx54	92	56.444	ENSPFOG00000019822	ddx54	78	56.406	Poecilia_formosa
ENSDORG00000003399	Ddx54	92	56.259	ENSPLAG00000004530	ddx54	78	56.259	Poecilia_latipinna
ENSDORG00000003399	Ddx54	92	56.112	ENSPMEG00000010803	ddx54	78	56.112	Poecilia_mexicana
ENSDORG00000003399	Ddx54	92	56.554	ENSPREG00000014372	ddx54	78	56.342	Poecilia_reticulata
ENSDORG00000003399	Ddx54	95	83.003	ENSPPYG00000004984	DDX54	80	83.003	Pongo_abelii
ENSDORG00000003399	Ddx54	95	75.107	ENSPCAG00000008462	DDX54	80	74.535	Procavia_capensis
ENSDORG00000003399	Ddx54	95	85.776	ENSPCOG00000006050	DDX54	80	85.776	Propithecus_coquereli
ENSDORG00000003399	Ddx54	86	78.070	ENSPVAG00000017347	DDX54	80	70.100	Pteropus_vampyrus
ENSDORG00000003399	Ddx54	95	57.405	ENSPNAG00000014459	ddx54	85	57.183	Pygocentrus_nattereri
ENSDORG00000003399	Ddx54	95	83.095	ENSRNOG00000001377	Ddx54	76	82.808	Rattus_norvegicus
ENSDORG00000003399	Ddx54	95	83.310	ENSRBIG00000032535	DDX54	78	85.609	Rhinopithecus_bieti
ENSDORG00000003399	Ddx54	92	81.912	ENSRROG00000029557	DDX54	77	82.941	Rhinopithecus_roxellana
ENSDORG00000003399	Ddx54	85	32.857	YDL031W	-	63	34.633	Saccharomyces_cerevisiae
ENSDORG00000003399	Ddx54	95	83.357	ENSSBOG00000028194	DDX54	80	83.903	Saimiri_boliviensis_boliviensis
ENSDORG00000003399	Ddx54	95	69.504	ENSSHAG00000015646	DDX54	85	70.959	Sarcophilus_harrisii
ENSDORG00000003399	Ddx54	95	57.326	ENSSFOG00015014981	ddx54	81	56.652	Scleropages_formosus
ENSDORG00000003399	Ddx54	93	52.782	ENSSMAG00000003210	ddx54	82	53.556	Scophthalmus_maximus
ENSDORG00000003399	Ddx54	93	53.846	ENSSDUG00000004474	ddx54	82	54.028	Seriola_dumerili
ENSDORG00000003399	Ddx54	93	55.213	ENSSLDG00000010380	ddx54	83	55.413	Seriola_lalandi_dorsalis
ENSDORG00000003399	Ddx54	95	65.994	ENSSPUG00000014141	DDX54	80	65.368	Sphenodon_punctatus
ENSDORG00000003399	Ddx54	92	54.197	ENSSPAG00000022918	ddx54	83	54.131	Stegastes_partitus
ENSDORG00000003399	Ddx54	95	84.046	ENSSSCG00000009876	DDX54	80	83.618	Sus_scrofa
ENSDORG00000003399	Ddx54	98	64.060	ENSTGUG00000009126	DDX54	89	63.786	Taeniopygia_guttata
ENSDORG00000003399	Ddx54	92	55.878	ENSTRUG00000014939	ddx54	79	55.604	Takifugu_rubripes
ENSDORG00000003399	Ddx54	92	57.738	ENSTNIG00000009037	ddx54	78	57.715	Tetraodon_nigroviridis
ENSDORG00000003399	Ddx54	81	88.095	ENSTBEG00000003783	DDX54	64	88.095	Tupaia_belangeri
ENSDORG00000003399	Ddx54	95	81.844	ENSTTRG00000016678	DDX54	80	81.702	Tursiops_truncatus
ENSDORG00000003399	Ddx54	95	83.546	ENSUAMG00000028387	DDX54	85	80.719	Ursus_americanus
ENSDORG00000003399	Ddx54	76	93.411	ENSUMAG00000010245	DDX54	82	85.473	Ursus_maritimus
ENSDORG00000003399	Ddx54	95	83.048	ENSVVUG00000010212	DDX54	80	83.048	Vulpes_vulpes
ENSDORG00000003399	Ddx54	95	59.169	ENSXETG00000016410	ddx54	82	59.169	Xenopus_tropicalis
ENSDORG00000003399	Ddx54	92	56.696	ENSXCOG00000002909	ddx54	78	56.612	Xiphophorus_couchianus
ENSDORG00000003399	Ddx54	92	56.869	ENSXMAG00000005312	ddx54	78	56.065	Xiphophorus_maculatus