EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000003405 (Gene tree)
Gene ID: 105992686
Gene Symbol: P4ha1
Alias: -
Full Name: prolyl 4-hydroxylase subunit alpha 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 64012 bases
Position: chrKN672432.1:1901451-1965462
Accession: 105992686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000003185	2OG-FeII_Oxy	PF03171.20	1.5e-08	1	1
ENSDORP00000026711	2OG-FeII_Oxy	PF03171.20	1.9e-08	1	1
ENSDORP00000027284	2OG-FeII_Oxy	PF03171.20	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000003405	-	1365	-	ENSDORP00000003185	454 (aa)	-	UPI000BAD0007
ENSDORT00000030625	-	2824	XM_013025690	ENSDORP00000027284	534 (aa)	XP_012881144	A0A1S3FYN1
ENSDORT00000026804	-	2824	XM_013025689	ENSDORP00000026711	534 (aa)	XP_012881143	A0A1S3FX56

Gene Model

Click here to download ENSDORG00000003405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000003405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000003405	P4ha1	90	41.137	ENSDORG00000011067	P4ha3	99	37.255
ENSDORG00000003405	P4ha1	99	64.686	ENSDORG00000013569	P4ha2	99	63.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000003405	P4ha1	100	97.191	ENSG00000122884	P4HA1	100	97.191	Homo_sapiens
ENSDORG00000003405	P4ha1	96	79.720	ENSAPOG00000005170	p4ha1b	99	74.401	Acanthochromis_polyacanthus
ENSDORG00000003405	P4ha1	100	96.816	ENSAMEG00000017009	P4HA1	100	96.816	Ailuropoda_melanoleuca
ENSDORG00000003405	P4ha1	96	78.986	ENSACIG00000007255	p4ha1b	99	74.570	Amphilophus_citrinellus
ENSDORG00000003405	P4ha1	96	79.720	ENSAOCG00000001647	p4ha1b	98	74.677	Amphiprion_ocellaris
ENSDORG00000003405	P4ha1	99	65.806	ENSAPEG00000010402	-	99	63.483	Amphiprion_percula
ENSDORG00000003405	P4ha1	96	79.720	ENSAPEG00000005243	p4ha1b	98	74.677	Amphiprion_percula
ENSDORG00000003405	P4ha1	96	81.818	ENSATEG00000009272	p4ha1b	98	75.791	Anabas_testudineus
ENSDORG00000003405	P4ha1	97	87.716	ENSAPLG00000009284	P4HA1	100	87.716	Anas_platyrhynchos
ENSDORG00000003405	P4ha1	100	85.874	ENSACAG00000000564	P4HA1	99	85.874	Anolis_carolinensis
ENSDORG00000003405	P4ha1	100	97.566	ENSANAG00000024545	P4HA1	100	98.000	Aotus_nancymaae
ENSDORG00000003405	P4ha1	96	80.435	ENSACLG00000021556	p4ha1b	99	74.026	Astatotilapia_calliptera
ENSDORG00000003405	P4ha1	100	75.000	ENSAMXG00000011123	p4ha1b	100	73.985	Astyanax_mexicanus
ENSDORG00000003405	P4ha1	100	96.816	ENSBTAG00000032996	P4HA1	100	96.816	Bos_taurus
ENSDORG00000003405	P4ha1	100	97.378	ENSCJAG00000007429	P4HA1	100	97.667	Callithrix_jacchus
ENSDORG00000003405	P4ha1	100	96.629	ENSCAFG00000014573	P4HA1	100	96.629	Canis_familiaris
ENSDORG00000003405	P4ha1	99	97.333	ENSCAFG00020023993	P4HA1	100	94.707	Canis_lupus_dingo
ENSDORG00000003405	P4ha1	100	97.000	ENSCHIG00000013957	P4HA1	100	96.442	Capra_hircus
ENSDORG00000003405	P4ha1	100	96.667	ENSTSYG00000004004	P4HA1	100	96.311	Carlito_syrichta
ENSDORG00000003405	P4ha1	100	96.255	ENSCPOG00000015701	P4HA1	100	97.000	Cavia_porcellus
ENSDORG00000003405	P4ha1	100	97.137	ENSCATG00000029618	P4HA1	100	97.667	Cercocebus_atys
ENSDORG00000003405	P4ha1	100	96.333	ENSCLAG00000017260	P4HA1	100	96.333	Chinchilla_lanigera
ENSDORG00000003405	P4ha1	100	97.004	ENSCSAG00000008626	P4HA1	100	97.004	Chlorocebus_sabaeus
ENSDORG00000003405	P4ha1	99	87.103	ENSCPBG00000007933	P4HA1	99	87.103	Chrysemys_picta_bellii
ENSDORG00000003405	P4ha1	100	97.004	ENSCANG00000033147	P4HA1	100	97.667	Colobus_angolensis_palliatus
ENSDORG00000003405	P4ha1	100	95.154	ENSCGRG00001007006	P4ha1	100	96.667	Cricetulus_griseus_chok1gshd
ENSDORG00000003405	P4ha1	100	95.154	ENSCGRG00000009371	P4ha1	100	96.667	Cricetulus_griseus_crigri
ENSDORG00000003405	P4ha1	100	74.074	ENSCSEG00000004939	p4ha1b	99	74.074	Cynoglossus_semilaevis
ENSDORG00000003405	P4ha1	99	75.000	ENSCVAG00000016433	p4ha1b	98	74.302	Cyprinodon_variegatus
ENSDORG00000003405	P4ha1	84	54.472	ENSDARG00000017038	zgc:152670	95	47.619	Danio_rerio
ENSDORG00000003405	P4ha1	97	75.862	ENSDARG00000071082	p4ha1b	99	75.987	Danio_rerio
ENSDORG00000003405	P4ha1	99	94.966	ENSDNOG00000013665	P4HA1	94	94.173	Dasypus_novemcinctus
ENSDORG00000003405	P4ha1	99	61.742	ENSEBUG00000005379	p4ha1b	98	61.742	Eptatretus_burgeri
ENSDORG00000003405	P4ha1	100	96.916	ENSEASG00005016606	P4HA1	100	97.667	Equus_asinus_asinus
ENSDORG00000003405	P4ha1	99	95.094	ENSECAG00000012496	P4HA1	99	97.835	Equus_caballus
ENSDORG00000003405	P4ha1	99	92.208	ENSEEUG00000005542	P4HA1	85	92.208	Erinaceus_europaeus
ENSDORG00000003405	P4ha1	99	72.356	ENSELUG00000005913	p4ha1b	99	73.837	Esox_lucius
ENSDORG00000003405	P4ha1	100	97.000	ENSFCAG00000018673	P4HA1	100	96.816	Felis_catus
ENSDORG00000003405	P4ha1	99	87.748	ENSFALG00000012773	P4HA1	99	86.355	Ficedula_albicollis
ENSDORG00000003405	P4ha1	100	96.000	ENSFDAG00000007094	P4HA1	100	87.337	Fukomys_damarensis
ENSDORG00000003405	P4ha1	96	78.322	ENSFHEG00000022856	p4ha1b	98	74.449	Fundulus_heteroclitus
ENSDORG00000003405	P4ha1	95	70.930	ENSGMOG00000018948	p4ha1b	99	70.930	Gadus_morhua
ENSDORG00000003405	P4ha1	99	88.411	ENSGALG00000004325	P4HA1	100	87.103	Gallus_gallus
ENSDORG00000003405	P4ha1	96	78.322	ENSGAFG00000019818	p4ha1b	98	75.000	Gambusia_affinis
ENSDORG00000003405	P4ha1	96	75.524	ENSGACG00000010233	p4ha1b	99	72.862	Gasterosteus_aculeatus
ENSDORG00000003405	P4ha1	100	97.191	ENSGGOG00000015551	P4HA1	100	97.667	Gorilla_gorilla
ENSDORG00000003405	P4ha1	96	80.435	ENSHBUG00000015524	p4ha1b	98	73.234	Haplochromis_burtoni
ENSDORG00000003405	P4ha1	100	97.000	ENSHGLG00000011764	P4HA1	100	97.000	Heterocephalus_glaber_female
ENSDORG00000003405	P4ha1	94	78.030	ENSHCOG00000017152	p4ha1b	99	75.292	Hippocampus_comes
ENSDORG00000003405	P4ha1	96	76.923	ENSIPUG00000015157	P4HA1	99	74.291	Ictalurus_punctatus
ENSDORG00000003405	P4ha1	100	97.000	ENSSTOG00000027062	P4HA1	100	97.000	Ictidomys_tridecemlineatus
ENSDORG00000003405	P4ha1	100	95.815	ENSJJAG00000004232	P4ha1	100	97.000	Jaculus_jaculus
ENSDORG00000003405	P4ha1	96	78.322	ENSKMAG00000001588	p4ha1b	99	74.586	Kryptolebias_marmoratus
ENSDORG00000003405	P4ha1	97	75.526	ENSLBEG00000018911	p4ha1b	98	74.164	Labrus_bergylta
ENSDORG00000003405	P4ha1	97	82.308	ENSLACG00000010202	P4HA1	99	80.603	Latimeria_chalumnae
ENSDORG00000003405	P4ha1	99	79.213	ENSLOCG00000008546	p4ha1b	98	79.213	Lepisosteus_oculatus
ENSDORG00000003405	P4ha1	100	94.382	ENSLAFG00000002652	P4HA1	100	94.382	Loxodonta_africana
ENSDORG00000003405	P4ha1	100	97.137	ENSMFAG00000030507	P4HA1	100	97.667	Macaca_fascicularis
ENSDORG00000003405	P4ha1	100	97.137	ENSMMUG00000011274	P4HA1	100	97.667	Macaca_mulatta
ENSDORG00000003405	P4ha1	99	94.747	ENSMNEG00000011433	P4HA1	98	96.869	Macaca_nemestrina
ENSDORG00000003405	P4ha1	96	91.781	ENSMLEG00000043338	P4HA1	100	99.180	Mandrillus_leucophaeus
ENSDORG00000003405	P4ha1	96	78.322	ENSMAMG00000015854	p4ha1b	99	73.978	Mastacembelus_armatus
ENSDORG00000003405	P4ha1	96	80.435	ENSMZEG00005027421	p4ha1b	98	73.234	Maylandia_zebra
ENSDORG00000003405	P4ha1	99	86.965	ENSMGAG00000005554	P4HA1	100	88.054	Meleagris_gallopavo
ENSDORG00000003405	P4ha1	100	78.131	ENSMAUG00000011056	P4ha1	97	89.000	Mesocricetus_auratus
ENSDORG00000003405	P4ha1	100	97.191	ENSMICG00000031365	P4HA1	100	97.667	Microcebus_murinus
ENSDORG00000003405	P4ha1	100	96.667	ENSMOCG00000017531	P4ha1	100	96.667	Microtus_ochrogaster
ENSDORG00000003405	P4ha1	96	79.021	ENSMMOG00000008022	p4ha1b	99	75.093	Mola_mola
ENSDORG00000003405	P4ha1	100	92.409	ENSMODG00000000121	P4HA1	99	90.875	Monodelphis_domestica
ENSDORG00000003405	P4ha1	96	78.322	ENSMALG00000019674	p4ha1b	98	74.444	Monopterus_albus
ENSDORG00000003405	P4ha1	100	95.154	MGP_CAROLIEiJ_G0015342	P4ha1	100	97.000	Mus_caroli
ENSDORG00000003405	P4ha1	100	95.154	ENSMUSG00000019916	P4ha1	100	97.000	Mus_musculus
ENSDORG00000003405	P4ha1	100	95.880	MGP_PahariEiJ_G0030758	P4ha1	100	97.667	Mus_pahari
ENSDORG00000003405	P4ha1	100	95.154	MGP_SPRETEiJ_G0016153	P4ha1	100	97.000	Mus_spretus
ENSDORG00000003405	P4ha1	100	97.333	ENSMPUG00000003940	P4HA1	100	97.004	Mustela_putorius_furo
ENSDORG00000003405	P4ha1	100	96.629	ENSMLUG00000006548	P4HA1	100	96.629	Myotis_lucifugus
ENSDORG00000003405	P4ha1	100	97.333	ENSNGAG00000014487	P4ha1	100	97.333	Nannospalax_galili
ENSDORG00000003405	P4ha1	96	80.435	ENSNBRG00000014791	p4ha1b	99	74.340	Neolamprologus_brichardi
ENSDORG00000003405	P4ha1	100	90.515	ENSNLEG00000035416	P4HA1	99	96.266	Nomascus_leucogenys
ENSDORG00000003405	P4ha1	89	91.429	ENSMEUG00000010326	P4HA1	95	82.377	Notamacropus_eugenii
ENSDORG00000003405	P4ha1	100	85.019	ENSOPRG00000000990	P4HA1	100	85.019	Ochotona_princeps
ENSDORG00000003405	P4ha1	100	95.595	ENSODEG00000015164	P4HA1	100	96.000	Octodon_degus
ENSDORG00000003405	P4ha1	96	80.435	ENSONIG00000000737	p4ha1b	88	73.567	Oreochromis_niloticus
ENSDORG00000003405	P4ha1	80	93.240	ENSOANG00000001125	-	100	93.240	Ornithorhynchus_anatinus
ENSDORG00000003405	P4ha1	100	95.880	ENSOCUG00000009739	P4HA1	100	95.880	Oryctolagus_cuniculus
ENSDORG00000003405	P4ha1	96	79.021	ENSORLG00000005147	p4ha1b	100	75.775	Oryzias_latipes
ENSDORG00000003405	P4ha1	96	79.021	ENSORLG00020010911	p4ha1b	98	74.539	Oryzias_latipes_hni
ENSDORG00000003405	P4ha1	87	80.208	ENSORLG00015016175	p4ha1b	98	75.104	Oryzias_latipes_hsok
ENSDORG00000003405	P4ha1	96	79.720	ENSOMEG00000009962	p4ha1b	99	75.970	Oryzias_melastigma
ENSDORG00000003405	P4ha1	100	96.455	ENSOGAG00000003483	P4HA1	100	96.455	Otolemur_garnettii
ENSDORG00000003405	P4ha1	100	97.000	ENSOARG00000007348	P4HA1	100	96.442	Ovis_aries
ENSDORG00000003405	P4ha1	98	97.667	ENSPPAG00000030135	P4HA1	100	99.180	Pan_paniscus
ENSDORG00000003405	P4ha1	100	96.667	ENSPPRG00000002655	P4HA1	100	96.629	Panthera_pardus
ENSDORG00000003405	P4ha1	100	96.667	ENSPTIG00000007711	P4HA1	100	96.629	Panthera_tigris_altaica
ENSDORG00000003405	P4ha1	100	94.934	ENSPTRG00000002619	P4HA1	100	94.934	Pan_troglodytes
ENSDORG00000003405	P4ha1	100	97.137	ENSPANG00000022355	P4HA1	100	97.667	Papio_anubis
ENSDORG00000003405	P4ha1	99	76.404	ENSPKIG00000000438	p4ha1b	99	76.404	Paramormyrops_kingsleyae
ENSDORG00000003405	P4ha1	99	86.891	ENSPSIG00000016298	P4HA1	100	86.891	Pelodiscus_sinensis
ENSDORG00000003405	P4ha1	94	81.679	ENSPMGG00000007593	p4ha1b	99	75.000	Periophthalmus_magnuspinnatus
ENSDORG00000003405	P4ha1	100	95.595	ENSPEMG00000006561	P4ha1	100	95.595	Peromyscus_maniculatus_bairdii
ENSDORG00000003405	P4ha1	100	92.079	ENSPCIG00000018768	P4HA1	100	90.875	Phascolarctos_cinereus
ENSDORG00000003405	P4ha1	96	79.021	ENSPFOG00000018574	p4ha1b	98	74.259	Poecilia_formosa
ENSDORG00000003405	P4ha1	96	79.021	ENSPLAG00000012628	p4ha1b	99	75.217	Poecilia_latipinna
ENSDORG00000003405	P4ha1	96	78.322	ENSPMEG00000024082	p4ha1b	98	74.259	Poecilia_mexicana
ENSDORG00000003405	P4ha1	96	78.322	ENSPREG00000010003	p4ha1b	98	74.815	Poecilia_reticulata
ENSDORG00000003405	P4ha1	100	97.191	ENSPPYG00000002348	P4HA1	100	97.191	Pongo_abelii
ENSDORG00000003405	P4ha1	95	87.205	ENSPCOG00000017553	P4HA1	100	98.770	Propithecus_coquereli
ENSDORG00000003405	P4ha1	99	86.792	ENSPVAG00000012989	P4HA1	99	86.792	Pteropus_vampyrus
ENSDORG00000003405	P4ha1	96	80.435	ENSPNYG00000002443	p4ha1b	98	73.469	Pundamilia_nyererei
ENSDORG00000003405	P4ha1	100	73.247	ENSPNAG00000023149	p4ha1b	100	73.704	Pygocentrus_nattereri
ENSDORG00000003405	P4ha1	100	95.318	ENSRNOG00000050655	P4ha1	100	95.318	Rattus_norvegicus
ENSDORG00000003405	P4ha1	100	93.711	ENSRBIG00000035304	P4HA1	100	84.457	Rhinopithecus_bieti
ENSDORG00000003405	P4ha1	100	97.191	ENSRROG00000044078	P4HA1	100	97.667	Rhinopithecus_roxellana
ENSDORG00000003405	P4ha1	71	90.415	ENSSHAG00000008056	P4HA1	100	88.860	Sarcophilus_harrisii
ENSDORG00000003405	P4ha1	99	77.778	ENSSFOG00015009176	p4ha1b	100	76.275	Scleropages_formosus
ENSDORG00000003405	P4ha1	100	73.937	ENSSMAG00000019199	p4ha1b	99	73.937	Scophthalmus_maximus
ENSDORG00000003405	P4ha1	96	79.021	ENSSDUG00000016587	p4ha1b	98	74.723	Seriola_dumerili
ENSDORG00000003405	P4ha1	96	78.322	ENSSLDG00000016261	p4ha1b	98	74.908	Seriola_lalandi_dorsalis
ENSDORG00000003405	P4ha1	100	92.135	ENSSARG00000003275	P4HA1	100	92.135	Sorex_araneus
ENSDORG00000003405	P4ha1	99	87.453	ENSSPUG00000002624	P4HA1	99	87.453	Sphenodon_punctatus
ENSDORG00000003405	P4ha1	83	84.211	ENSSPAG00000011193	p4ha1b	100	73.629	Stegastes_partitus
ENSDORG00000003405	P4ha1	100	96.000	ENSSSCG00000010292	P4HA1	100	95.880	Sus_scrofa
ENSDORG00000003405	P4ha1	99	87.086	ENSTGUG00000004364	-	99	85.981	Taeniopygia_guttata
ENSDORG00000003405	P4ha1	99	73.211	ENSTRUG00000004081	p4ha1b	99	74.312	Takifugu_rubripes
ENSDORG00000003405	P4ha1	99	74.340	ENSTNIG00000017021	p4ha1b	99	74.340	Tetraodon_nigroviridis
ENSDORG00000003405	P4ha1	100	95.131	ENSTTRG00000009782	P4HA1	100	94.569	Tursiops_truncatus
ENSDORG00000003405	P4ha1	54	99.180	ENSUAMG00000011694	-	100	99.180	Ursus_americanus
ENSDORG00000003405	P4ha1	100	96.816	ENSUMAG00000009024	P4HA1	100	96.816	Ursus_maritimus
ENSDORG00000003405	P4ha1	100	97.667	ENSVPAG00000007253	P4HA1	100	86.142	Vicugna_pacos
ENSDORG00000003405	P4ha1	100	96.629	ENSVVUG00000022660	P4HA1	100	96.629	Vulpes_vulpes
ENSDORG00000003405	P4ha1	97	87.143	ENSXETG00000006154	p4ha1	97	77.481	Xenopus_tropicalis
ENSDORG00000003405	P4ha1	96	80.435	ENSXCOG00000010262	p4ha1b	99	74.307	Xiphophorus_couchianus
ENSDORG00000003405	P4ha1	96	78.322	ENSXMAG00000003889	p4ha1b	98	74.721	Xiphophorus_maculatus