EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000003843 (Gene tree)
Gene ID: 105985657
Gene Symbol: Utp6
Alias: 4732497O03Rik|HCA66
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 30411 bases
Position: chrKN672377.1:2561546-2591956
Accession: 105985657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000003589	U3_assoc_6	PF08640.11	1.1e-24	1	1
ENSDORP00000018121	U3_assoc_6	PF08640.11	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000035083	-	1707	-	ENSDORP00000018121	569 (aa)	-	UPI000BACF71B
ENSDORT00000003842	-	1758	XM_013016288	ENSDORP00000003589	544 (aa)	XP_012871742	UPI000BAD040C

Gene Model

Click here to download ENSDORG00000003843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000003843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000003843	Utp6	100	84.587	ENSG00000108651	UTP6	91	84.587	Homo_sapiens
ENSDORG00000003843	Utp6	99	56.250	ENSAPOG00000000435	utp6	95	53.805	Acanthochromis_polyacanthus
ENSDORG00000003843	Utp6	100	85.348	ENSAMEG00000005443	UTP6	91	85.348	Ailuropoda_melanoleuca
ENSDORG00000003843	Utp6	99	54.779	ENSACIG00000004124	utp6	95	52.389	Amphilophus_citrinellus
ENSDORG00000003843	Utp6	99	56.250	ENSAOCG00000016812	utp6	95	53.805	Amphiprion_ocellaris
ENSDORG00000003843	Utp6	99	56.066	ENSAPEG00000023565	utp6	95	53.628	Amphiprion_percula
ENSDORG00000003843	Utp6	99	56.250	ENSATEG00000003401	utp6	95	53.451	Anabas_testudineus
ENSDORG00000003843	Utp6	99	66.108	ENSAPLG00000005821	UTP6	90	66.108	Anas_platyrhynchos
ENSDORG00000003843	Utp6	99	65.257	ENSACAG00000009472	UTP6	95	61.837	Anolis_carolinensis
ENSDORG00000003843	Utp6	100	85.138	ENSANAG00000034603	UTP6	99	84.940	Aotus_nancymaae
ENSDORG00000003843	Utp6	99	57.353	ENSACLG00000006728	utp6	95	54.867	Astatotilapia_calliptera
ENSDORG00000003843	Utp6	99	56.985	ENSAMXG00000009478	utp6	95	53.805	Astyanax_mexicanus
ENSDORG00000003843	Utp6	100	70.330	ENSBTAG00000003769	-	90	70.513	Bos_taurus
ENSDORG00000003843	Utp6	100	71.612	ENSBTAG00000015612	UTP6	98	69.925	Bos_taurus
ENSDORG00000003843	Utp6	100	85.505	ENSCJAG00000014115	UTP6	91	85.505	Callithrix_jacchus
ENSDORG00000003843	Utp6	100	85.714	ENSCAFG00000018507	UTP6	91	85.714	Canis_familiaris
ENSDORG00000003843	Utp6	100	85.714	ENSCAFG00020014678	UTP6	91	85.714	Canis_lupus_dingo
ENSDORG00000003843	Utp6	100	71.795	ENSCHIG00000017954	-	91	71.795	Capra_hircus
ENSDORG00000003843	Utp6	100	71.795	ENSCHIG00000009726	-	91	71.795	Capra_hircus
ENSDORG00000003843	Utp6	99	73.945	ENSTSYG00000002202	UTP6	91	73.945	Carlito_syrichta
ENSDORG00000003843	Utp6	96	75.475	ENSCAPG00000017595	UTP6	95	75.475	Cavia_aperea
ENSDORG00000003843	Utp6	100	86.606	ENSCPOG00000014294	UTP6	91	86.606	Cavia_porcellus
ENSDORG00000003843	Utp6	100	77.798	ENSCCAG00000033318	-	91	77.798	Cebus_capucinus
ENSDORG00000003843	Utp6	100	84.799	ENSCATG00000034868	UTP6	91	84.799	Cercocebus_atys
ENSDORG00000003843	Utp6	100	86.789	ENSCLAG00000007274	UTP6	91	86.789	Chinchilla_lanigera
ENSDORG00000003843	Utp6	100	84.432	ENSCSAG00000006595	UTP6	91	84.432	Chlorocebus_sabaeus
ENSDORG00000003843	Utp6	82	64.855	ENSCHOG00000010940	-	75	64.855	Choloepus_hoffmanni
ENSDORG00000003843	Utp6	100	69.725	ENSCPBG00000004652	UTP6	91	69.725	Chrysemys_picta_bellii
ENSDORG00000003843	Utp6	99	30.973	ENSCING00000022947	-	91	31.162	Ciona_intestinalis
ENSDORG00000003843	Utp6	59	37.082	ENSCSAVG00000011416	-	100	37.082	Ciona_savignyi
ENSDORG00000003843	Utp6	96	63.308	ENSCANG00000031141	UTP6	90	63.308	Colobus_angolensis_palliatus
ENSDORG00000003843	Utp6	100	86.813	ENSCGRG00001000046	Utp6	91	86.813	Cricetulus_griseus_chok1gshd
ENSDORG00000003843	Utp6	94	86.602	ENSCGRG00000011543	Utp6	91	86.602	Cricetulus_griseus_crigri
ENSDORG00000003843	Utp6	99	53.945	ENSCSEG00000013422	utp6	94	51.872	Cynoglossus_semilaevis
ENSDORG00000003843	Utp6	99	56.618	ENSCVAG00000020322	utp6	95	53.805	Cyprinodon_variegatus
ENSDORG00000003843	Utp6	99	54.596	ENSDARG00000098433	utp6	100	66.298	Danio_rerio
ENSDORG00000003843	Utp6	100	85.897	ENSDNOG00000037018	UTP6	91	85.897	Dasypus_novemcinctus
ENSDORG00000003843	Utp6	100	85.897	ENSEASG00005010870	UTP6	91	85.897	Equus_asinus_asinus
ENSDORG00000003843	Utp6	100	85.714	ENSECAG00000022217	UTP6	91	85.714	Equus_caballus
ENSDORG00000003843	Utp6	99	56.985	ENSELUG00000006618	utp6	95	54.159	Esox_lucius
ENSDORG00000003843	Utp6	100	82.051	ENSFCAG00000015795	UTP6	91	82.051	Felis_catus
ENSDORG00000003843	Utp6	100	66.972	ENSFALG00000002282	UTP6	95	63.333	Ficedula_albicollis
ENSDORG00000003843	Utp6	100	86.422	ENSFDAG00000019506	UTP6	91	86.422	Fukomys_damarensis
ENSDORG00000003843	Utp6	99	56.434	ENSFHEG00000010373	utp6	95	53.805	Fundulus_heteroclitus
ENSDORG00000003843	Utp6	99	55.515	ENSGMOG00000011958	utp6	91	55.515	Gadus_morhua
ENSDORG00000003843	Utp6	100	67.523	ENSGALG00000003260	UTP6	91	67.890	Gallus_gallus
ENSDORG00000003843	Utp6	99	57.169	ENSGAFG00000008505	utp6	95	54.513	Gambusia_affinis
ENSDORG00000003843	Utp6	99	56.250	ENSGACG00000019424	utp6	95	53.451	Gasterosteus_aculeatus
ENSDORG00000003843	Utp6	100	68.807	ENSGAGG00000004820	UTP6	91	68.807	Gopherus_agassizii
ENSDORG00000003843	Utp6	100	84.771	ENSGGOG00000013569	UTP6	91	84.771	Gorilla_gorilla
ENSDORG00000003843	Utp6	100	67.463	ENSGGOG00000026003	-	90	67.463	Gorilla_gorilla
ENSDORG00000003843	Utp6	99	57.353	ENSHBUG00000018668	utp6	95	54.867	Haplochromis_burtoni
ENSDORG00000003843	Utp6	99	80.074	ENSHGLG00000008642	-	92	80.074	Heterocephalus_glaber_female
ENSDORG00000003843	Utp6	100	86.055	ENSHGLG00000010332	UTP6	91	86.055	Heterocephalus_glaber_female
ENSDORG00000003843	Utp6	99	80.258	ENSHGLG00100006047	-	95	80.258	Heterocephalus_glaber_male
ENSDORG00000003843	Utp6	100	82.385	ENSHGLG00100014271	-	91	82.385	Heterocephalus_glaber_male
ENSDORG00000003843	Utp6	99	55.147	ENSHCOG00000017277	utp6	95	52.212	Hippocampus_comes
ENSDORG00000003843	Utp6	99	56.618	ENSIPUG00000022587	Utp6	92	56.801	Ictalurus_punctatus
ENSDORG00000003843	Utp6	100	86.447	ENSSTOG00000015875	UTP6	91	86.447	Ictidomys_tridecemlineatus
ENSDORG00000003843	Utp6	99	56.250	ENSKMAG00000021631	utp6	95	53.805	Kryptolebias_marmoratus
ENSDORG00000003843	Utp6	99	57.353	ENSLBEG00000002115	utp6	95	54.867	Labrus_bergylta
ENSDORG00000003843	Utp6	100	66.422	ENSLACG00000017158	UTP6	91	66.422	Latimeria_chalumnae
ENSDORG00000003843	Utp6	99	59.743	ENSLOCG00000013797	utp6	94	57.244	Lepisosteus_oculatus
ENSDORG00000003843	Utp6	100	84.799	ENSLAFG00000013008	UTP6	91	84.799	Loxodonta_africana
ENSDORG00000003843	Utp6	100	84.799	ENSMFAG00000038842	UTP6	91	84.799	Macaca_fascicularis
ENSDORG00000003843	Utp6	100	59.158	ENSMFAG00000041904	-	94	58.185	Macaca_fascicularis
ENSDORG00000003843	Utp6	100	84.799	ENSMMUG00000020403	UTP6	91	84.799	Macaca_mulatta
ENSDORG00000003843	Utp6	100	84.799	ENSMNEG00000039480	UTP6	91	84.799	Macaca_nemestrina
ENSDORG00000003843	Utp6	99	66.789	ENSMLEG00000039364	-	91	66.789	Mandrillus_leucophaeus
ENSDORG00000003843	Utp6	100	67.890	ENSMLEG00000032174	UTP6	90	67.890	Mandrillus_leucophaeus
ENSDORG00000003843	Utp6	99	55.515	ENSMAMG00000002228	utp6	94	52.743	Mastacembelus_armatus
ENSDORG00000003843	Utp6	99	57.353	ENSMZEG00005023895	utp6	95	54.867	Maylandia_zebra
ENSDORG00000003843	Utp6	94	67.248	ENSMGAG00000008111	UTP6	91	67.248	Meleagris_gallopavo
ENSDORG00000003843	Utp6	100	86.813	ENSMAUG00000021895	Utp6	91	86.813	Mesocricetus_auratus
ENSDORG00000003843	Utp6	100	80.220	ENSMICG00000002632	UTP6	91	80.220	Microcebus_murinus
ENSDORG00000003843	Utp6	100	85.714	ENSMOCG00000014163	Utp6	91	85.714	Microtus_ochrogaster
ENSDORG00000003843	Utp6	99	55.147	ENSMMOG00000008653	utp6	95	52.743	Mola_mola
ENSDORG00000003843	Utp6	100	67.216	ENSMODG00000019206	UTP6	95	63.492	Monodelphis_domestica
ENSDORG00000003843	Utp6	99	55.882	ENSMALG00000021112	utp6	95	53.982	Monopterus_albus
ENSDORG00000003843	Utp6	100	87.179	MGP_CAROLIEiJ_G0016828	Utp6	91	87.179	Mus_caroli
ENSDORG00000003843	Utp6	100	87.363	ENSMUSG00000035575	Utp6	91	87.363	Mus_musculus
ENSDORG00000003843	Utp6	100	71.376	MGP_PahariEiJ_G0017965	Utp6	91	71.376	Mus_pahari
ENSDORG00000003843	Utp6	100	87.363	MGP_SPRETEiJ_G0017672	Utp6	91	87.363	Mus_spretus
ENSDORG00000003843	Utp6	100	83.150	ENSMPUG00000014581	UTP6	92	83.150	Mustela_putorius_furo
ENSDORG00000003843	Utp6	100	83.516	ENSMLUG00000016422	UTP6	91	83.516	Myotis_lucifugus
ENSDORG00000003843	Utp6	100	86.996	ENSNGAG00000015482	Utp6	91	86.996	Nannospalax_galili
ENSDORG00000003843	Utp6	99	57.537	ENSNBRG00000019714	utp6	95	55.044	Neolamprologus_brichardi
ENSDORG00000003843	Utp6	100	84.220	ENSNLEG00000011009	UTP6	91	84.220	Nomascus_leucogenys
ENSDORG00000003843	Utp6	79	71.379	ENSOPRG00000008446	-	72	71.379	Ochotona_princeps
ENSDORG00000003843	Utp6	73	84.388	ENSODEG00000011971	UTP6	100	84.388	Octodon_degus
ENSDORG00000003843	Utp6	99	57.537	ENSONIG00000018090	utp6	95	55.044	Oreochromis_niloticus
ENSDORG00000003843	Utp6	98	66.418	ENSOANG00000004279	UTP6	90	66.418	Ornithorhynchus_anatinus
ENSDORG00000003843	Utp6	100	82.418	ENSOCUG00000016980	UTP6	91	82.418	Oryctolagus_cuniculus
ENSDORG00000003843	Utp6	99	57.169	ENSORLG00000003546	utp6	61	54.513	Oryzias_latipes
ENSDORG00000003843	Utp6	99	57.169	ENSORLG00020010377	utp6	95	54.513	Oryzias_latipes_hni
ENSDORG00000003843	Utp6	99	56.618	ENSORLG00015008893	utp6	95	53.982	Oryzias_latipes_hsok
ENSDORG00000003843	Utp6	99	56.618	ENSOMEG00000017487	utp6	95	53.982	Oryzias_melastigma
ENSDORG00000003843	Utp6	96	75.335	ENSOGAG00000004511	UTP6	100	75.335	Otolemur_garnettii
ENSDORG00000003843	Utp6	100	71.612	ENSOARG00000013474	UTP6	91	71.612	Ovis_aries
ENSDORG00000003843	Utp6	100	68.382	ENSPPAG00000016895	-	90	68.382	Pan_paniscus
ENSDORG00000003843	Utp6	100	84.771	ENSPPAG00000038089	UTP6	91	84.771	Pan_paniscus
ENSDORG00000003843	Utp6	100	85.897	ENSPPRG00000001010	UTP6	91	85.897	Panthera_pardus
ENSDORG00000003843	Utp6	100	85.714	ENSPTIG00000013913	UTP6	91	85.714	Panthera_tigris_altaica
ENSDORG00000003843	Utp6	100	84.771	ENSPTRG00000008977	UTP6	91	84.771	Pan_troglodytes
ENSDORG00000003843	Utp6	100	68.199	ENSPTRG00000044798	-	90	68.199	Pan_troglodytes
ENSDORG00000003843	Utp6	100	81.901	ENSPANG00000023113	UTP6	91	81.901	Papio_anubis
ENSDORG00000003843	Utp6	99	66.728	ENSPANG00000034274	-	91	66.728	Papio_anubis
ENSDORG00000003843	Utp6	99	56.410	ENSPKIG00000004653	utp6	91	56.410	Paramormyrops_kingsleyae
ENSDORG00000003843	Utp6	100	67.156	ENSPSIG00000012435	UTP6	91	68.257	Pelodiscus_sinensis
ENSDORG00000003843	Utp6	99	56.434	ENSPMGG00000009548	utp6	95	53.805	Periophthalmus_magnuspinnatus
ENSDORG00000003843	Utp6	100	86.813	ENSPEMG00000014081	Utp6	91	86.813	Peromyscus_maniculatus_bairdii
ENSDORG00000003843	Utp6	92	46.139	ENSPMAG00000009561	utp6	95	44.074	Petromyzon_marinus
ENSDORG00000003843	Utp6	100	68.991	ENSPCIG00000029968	UTP6	79	68.991	Phascolarctos_cinereus
ENSDORG00000003843	Utp6	99	56.434	ENSPFOG00000013918	utp6	95	54.159	Poecilia_formosa
ENSDORG00000003843	Utp6	99	57.169	ENSPLAG00000017825	utp6	95	54.513	Poecilia_latipinna
ENSDORG00000003843	Utp6	99	56.434	ENSPMEG00000008133	utp6	95	54.159	Poecilia_mexicana
ENSDORG00000003843	Utp6	99	55.331	ENSPREG00000013108	utp6	94	52.743	Poecilia_reticulata
ENSDORG00000003843	Utp6	100	80.550	ENSPPYG00000008154	UTP6	91	80.550	Pongo_abelii
ENSDORG00000003843	Utp6	73	87.500	ENSPCAG00000014878	-	73	87.500	Procavia_capensis
ENSDORG00000003843	Utp6	100	80.220	ENSPCOG00000010224	UTP6	91	80.220	Propithecus_coquereli
ENSDORG00000003843	Utp6	100	79.853	ENSPVAG00000015759	UTP6	91	79.853	Pteropus_vampyrus
ENSDORG00000003843	Utp6	99	56.985	ENSPNYG00000002290	utp6	95	54.513	Pundamilia_nyererei
ENSDORG00000003843	Utp6	99	54.596	ENSPNAG00000027370	utp6	95	51.681	Pygocentrus_nattereri
ENSDORG00000003843	Utp6	100	85.531	ENSRNOG00000014209	Utp6	91	85.531	Rattus_norvegicus
ENSDORG00000003843	Utp6	100	84.615	ENSRBIG00000020822	UTP6	91	84.615	Rhinopithecus_bieti
ENSDORG00000003843	Utp6	100	84.615	ENSRROG00000036838	UTP6	91	84.674	Rhinopithecus_roxellana
ENSDORG00000003843	Utp6	54	71.918	ENSSHAG00000018792	-	99	70.569	Sarcophilus_harrisii
ENSDORG00000003843	Utp6	99	56.856	ENSSFOG00015005978	utp6	91	56.856	Scleropages_formosus
ENSDORG00000003843	Utp6	99	56.801	ENSSMAG00000014772	utp6	95	54.159	Scophthalmus_maximus
ENSDORG00000003843	Utp6	99	56.801	ENSSDUG00000000329	utp6	95	54.690	Seriola_dumerili
ENSDORG00000003843	Utp6	99	56.801	ENSSLDG00000016724	utp6	95	54.690	Seriola_lalandi_dorsalis
ENSDORG00000003843	Utp6	96	76.099	ENSSARG00000010778	UTP6	87	76.099	Sorex_araneus
ENSDORG00000003843	Utp6	100	66.422	ENSSPUG00000005273	UTP6	95	63.074	Sphenodon_punctatus
ENSDORG00000003843	Utp6	99	54.963	ENSSPAG00000011871	utp6	94	52.389	Stegastes_partitus
ENSDORG00000003843	Utp6	100	83.333	ENSSSCG00000017745	UTP6	99	83.333	Sus_scrofa
ENSDORG00000003843	Utp6	100	66.789	ENSTGUG00000004999	UTP6	95	62.807	Taeniopygia_guttata
ENSDORG00000003843	Utp6	99	55.699	ENSTRUG00000012005	utp6	95	53.451	Takifugu_rubripes
ENSDORG00000003843	Utp6	99	56.066	ENSTNIG00000003235	utp6	95	53.982	Tetraodon_nigroviridis
ENSDORG00000003843	Utp6	56	75.691	ENSTBEG00000005388	-	51	75.691	Tupaia_belangeri
ENSDORG00000003843	Utp6	100	83.700	ENSTTRG00000009911	UTP6	91	83.700	Tursiops_truncatus
ENSDORG00000003843	Utp6	100	85.897	ENSUMAG00000015139	UTP6	91	85.897	Ursus_maritimus
ENSDORG00000003843	Utp6	100	82.967	ENSVPAG00000005782	UTP6	91	82.967	Vicugna_pacos
ENSDORG00000003843	Utp6	100	85.714	ENSVVUG00000012238	UTP6	91	85.714	Vulpes_vulpes
ENSDORG00000003843	Utp6	99	50.184	ENSXETG00000020057	utp6	91	50.184	Xenopus_tropicalis
ENSDORG00000003843	Utp6	99	56.227	ENSXCOG00000013626	utp6	95	53.616	Xiphophorus_couchianus
ENSDORG00000003843	Utp6	99	56.250	ENSXMAG00000017414	utp6	95	53.628	Xiphophorus_maculatus