EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000004013 (Gene tree)
Gene ID: 105987559
Gene Symbol: Larp4
Alias: D330037H05Rik
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 59850 bases
Position: chrKN672388.1:1739027-1798876
Accession: 105987559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000003747	La	PF05383.17	3.9e-17	1	1
ENSDORP00000021163	La	PF05383.17	3.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000004013	-	2112	-	ENSDORP00000003747	703 (aa)	-	UPI000BACF5B4
ENSDORT00000024507	-	2115	XM_013018849	ENSDORP00000021163	704 (aa)	XP_012874303	UPI000BAD02FB

Gene Model

Click here to download ENSDORG00000004013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000004013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000004013	Larp4	93	46.216	ENSDORG00000009328	Larp4b	89	46.216

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000004013	Larp4	100	86.188	ENSG00000161813	LARP4	100	94.400	Homo_sapiens
ENSDORG00000004013	Larp4	99	43.816	ENSAPOG00000021331	larp4ab	99	43.215	Acanthochromis_polyacanthus
ENSDORG00000004013	Larp4	99	47.601	ENSAPOG00000007142	larp4aa	84	59.530	Acanthochromis_polyacanthus
ENSDORG00000004013	Larp4	99	86.408	ENSAMEG00000001275	LARP4	100	86.408	Ailuropoda_melanoleuca
ENSDORG00000004013	Larp4	88	57.292	ENSACIG00000001198	larp4aa	91	71.765	Amphilophus_citrinellus
ENSDORG00000004013	Larp4	99	42.573	ENSAOCG00000006387	larp4ab	99	41.833	Amphiprion_ocellaris
ENSDORG00000004013	Larp4	50	54.667	ENSAPEG00000015441	larp4ab	98	54.667	Amphiprion_percula
ENSDORG00000004013	Larp4	99	40.130	ENSATEG00000001018	larp4ab	99	40.597	Anabas_testudineus
ENSDORG00000004013	Larp4	99	69.357	ENSAPLG00000013661	LARP4	99	68.947	Anas_platyrhynchos
ENSDORG00000004013	Larp4	100	64.354	ENSACAG00000017133	LARP4	97	63.946	Anolis_carolinensis
ENSDORG00000004013	Larp4	100	85.499	ENSANAG00000029342	LARP4	100	85.499	Aotus_nancymaae
ENSDORG00000004013	Larp4	50	58.133	ENSACLG00000002575	larp4aa	95	45.512	Astatotilapia_calliptera
ENSDORG00000004013	Larp4	50	50.785	ENSACLG00000000777	larp4ab	99	50.785	Astatotilapia_calliptera
ENSDORG00000004013	Larp4	70	49.906	ENSAMXG00000001515	larp4ab	95	44.560	Astyanax_mexicanus
ENSDORG00000004013	Larp4	99	47.294	ENSAMXG00000036493	larp4aa	94	48.124	Astyanax_mexicanus
ENSDORG00000004013	Larp4	100	84.490	ENSBTAG00000017164	LARP4	100	84.490	Bos_taurus
ENSDORG00000004013	Larp4	100	85.793	ENSCJAG00000021131	LARP4	100	85.793	Callithrix_jacchus
ENSDORG00000004013	Larp4	100	87.414	ENSCAFG00000008174	LARP4	100	87.414	Canis_familiaris
ENSDORG00000004013	Larp4	100	86.933	ENSCAFG00020014554	LARP4	100	86.981	Canis_lupus_dingo
ENSDORG00000004013	Larp4	100	84.490	ENSCHIG00000025965	LARP4	100	84.490	Capra_hircus
ENSDORG00000004013	Larp4	100	86.759	ENSTSYG00000004342	LARP4	100	86.759	Carlito_syrichta
ENSDORG00000004013	Larp4	99	72.046	ENSCAPG00000012942	LARP4	100	71.470	Cavia_aperea
ENSDORG00000004013	Larp4	100	82.553	ENSCPOG00000020519	LARP4	100	82.553	Cavia_porcellus
ENSDORG00000004013	Larp4	100	85.359	ENSCCAG00000024439	LARP4	100	85.359	Cebus_capucinus
ENSDORG00000004013	Larp4	99	84.819	ENSCATG00000044528	LARP4	100	84.819	Cercocebus_atys
ENSDORG00000004013	Larp4	100	86.565	ENSCLAG00000001829	LARP4	100	86.565	Chinchilla_lanigera
ENSDORG00000004013	Larp4	56	91.429	ENSCHOG00000010490	-	55	91.429	Choloepus_hoffmanni
ENSDORG00000004013	Larp4	100	70.769	ENSCPBG00000019407	LARP4	90	71.229	Chrysemys_picta_bellii
ENSDORG00000004013	Larp4	100	86.759	ENSCANG00000029159	-	100	86.759	Colobus_angolensis_palliatus
ENSDORG00000004013	Larp4	100	77.455	ENSCANG00000033097	-	100	79.478	Colobus_angolensis_palliatus
ENSDORG00000004013	Larp4	100	83.840	ENSCGRG00001010818	Larp4	100	83.840	Cricetulus_griseus_chok1gshd
ENSDORG00000004013	Larp4	100	83.679	ENSCGRG00000009382	Larp4	100	83.705	Cricetulus_griseus_crigri
ENSDORG00000004013	Larp4	57	49.446	ENSCSEG00000003240	larp4ab	94	41.864	Cynoglossus_semilaevis
ENSDORG00000004013	Larp4	99	47.208	ENSCSEG00000001963	larp4aa	84	58.961	Cynoglossus_semilaevis
ENSDORG00000004013	Larp4	100	47.211	ENSDARG00000074979	larp4ab	86	77.124	Danio_rerio
ENSDORG00000004013	Larp4	99	45.293	ENSDARG00000078401	larp4aa	95	45.058	Danio_rerio
ENSDORG00000004013	Larp4	100	85.379	ENSDNOG00000038525	LARP4	100	85.379	Dasypus_novemcinctus
ENSDORG00000004013	Larp4	72	79.245	ENSETEG00000011683	LARP4	71	79.245	Echinops_telfairi
ENSDORG00000004013	Larp4	69	37.679	ENSEBUG00000010394	LARP4	87	37.262	Eptatretus_burgeri
ENSDORG00000004013	Larp4	70	39.286	ENSEBUG00000004426	LARP4	65	45.596	Eptatretus_burgeri
ENSDORG00000004013	Larp4	99	90.922	ENSEASG00005004356	LARP4	99	90.922	Equus_asinus_asinus
ENSDORG00000004013	Larp4	100	88.797	ENSECAG00000012479	LARP4	100	88.797	Equus_caballus
ENSDORG00000004013	Larp4	78	95.726	ENSEEUG00000000316	LARP4	76	95.726	Erinaceus_europaeus
ENSDORG00000004013	Larp4	88	55.556	ENSELUG00000000395	larp4aa	79	68.033	Esox_lucius
ENSDORG00000004013	Larp4	99	43.958	ENSELUG00000018650	larp4ab	85	67.521	Esox_lucius
ENSDORG00000004013	Larp4	100	87.862	ENSFCAG00000031897	LARP4	100	87.862	Felis_catus
ENSDORG00000004013	Larp4	86	64.921	ENSFALG00000002114	LARP4	98	66.461	Ficedula_albicollis
ENSDORG00000004013	Larp4	100	86.030	ENSFDAG00000006406	-	100	86.030	Fukomys_damarensis
ENSDORG00000004013	Larp4	99	42.008	ENSFHEG00000013854	larp4ab	99	41.347	Fundulus_heteroclitus
ENSDORG00000004013	Larp4	99	46.457	ENSGMOG00000008246	larp4aa	95	46.588	Gadus_morhua
ENSDORG00000004013	Larp4	95	69.000	ENSGALG00000042122	LARP4	93	68.571	Gallus_gallus
ENSDORG00000004013	Larp4	99	42.308	ENSGAFG00000021777	larp4ab	99	41.777	Gambusia_affinis
ENSDORG00000004013	Larp4	99	43.941	ENSGACG00000000680	larp4ab	100	43.137	Gasterosteus_aculeatus
ENSDORG00000004013	Larp4	99	47.513	ENSGACG00000008381	larp4aa	99	59.151	Gasterosteus_aculeatus
ENSDORG00000004013	Larp4	100	68.076	ENSGAGG00000006969	LARP4	100	68.529	Gopherus_agassizii
ENSDORG00000004013	Larp4	100	80.775	ENSGGOG00000015230	LARP4	99	86.253	Gorilla_gorilla
ENSDORG00000004013	Larp4	50	58.133	ENSHBUG00000023074	larp4aa	95	45.660	Haplochromis_burtoni
ENSDORG00000004013	Larp4	91	84.871	ENSHGLG00000005513	-	100	84.871	Heterocephalus_glaber_female
ENSDORG00000004013	Larp4	85	77.994	ENSHGLG00000013875	-	100	76.861	Heterocephalus_glaber_female
ENSDORG00000004013	Larp4	62	69.248	ENSHGLG00000010979	-	93	72.500	Heterocephalus_glaber_female
ENSDORG00000004013	Larp4	100	85.144	ENSHGLG00100016984	-	100	85.144	Heterocephalus_glaber_male
ENSDORG00000004013	Larp4	100	79.086	ENSHGLG00100011678	-	100	78.976	Heterocephalus_glaber_male
ENSDORG00000004013	Larp4	62	69.248	ENSHGLG00100002832	-	93	72.500	Heterocephalus_glaber_male
ENSDORG00000004013	Larp4	99	39.102	ENSHCOG00000020857	larp4ab	99	38.705	Hippocampus_comes
ENSDORG00000004013	Larp4	99	47.036	ENSHCOG00000015951	larp4aa	95	46.907	Hippocampus_comes
ENSDORG00000004013	Larp4	99	45.897	ENSIPUG00000007514	larp4aa	95	45.897	Ictalurus_punctatus
ENSDORG00000004013	Larp4	100	45.040	ENSIPUG00000021659	larp4ab	100	45.161	Ictalurus_punctatus
ENSDORG00000004013	Larp4	100	88.122	ENSSTOG00000003553	LARP4	100	88.122	Ictidomys_tridecemlineatus
ENSDORG00000004013	Larp4	50	67.967	ENSJJAG00000014649	-	95	88.571	Jaculus_jaculus
ENSDORG00000004013	Larp4	99	41.915	ENSKMAG00000018556	larp4ab	99	42.408	Kryptolebias_marmoratus
ENSDORG00000004013	Larp4	99	39.740	ENSLBEG00000019306	larp4ab	100	40.051	Labrus_bergylta
ENSDORG00000004013	Larp4	99	55.898	ENSLACG00000019090	LARP4	99	54.960	Latimeria_chalumnae
ENSDORG00000004013	Larp4	99	49.671	ENSLOCG00000007113	larp4ab	95	49.934	Lepisosteus_oculatus
ENSDORG00000004013	Larp4	100	86.050	ENSLAFG00000005160	LARP4	100	86.050	Loxodonta_africana
ENSDORG00000004013	Larp4	99	86.824	ENSMFAG00000043681	LARP4	99	86.824	Macaca_fascicularis
ENSDORG00000004013	Larp4	100	86.183	ENSMMUG00000008172	LARP4	100	86.183	Macaca_mulatta
ENSDORG00000004013	Larp4	92	86.866	ENSMNEG00000034602	LARP4	100	84.885	Macaca_nemestrina
ENSDORG00000004013	Larp4	100	61.952	ENSMNEG00000037799	-	96	75.138	Macaca_nemestrina
ENSDORG00000004013	Larp4	100	86.759	ENSMLEG00000039661	LARP4	100	86.759	Mandrillus_leucophaeus
ENSDORG00000004013	Larp4	99	43.061	ENSMAMG00000002616	larp4ab	99	43.191	Mastacembelus_armatus
ENSDORG00000004013	Larp4	50	50.785	ENSMZEG00005007771	larp4ab	99	50.785	Maylandia_zebra
ENSDORG00000004013	Larp4	50	58.133	ENSMZEG00005001813	larp4aa	95	45.512	Maylandia_zebra
ENSDORG00000004013	Larp4	95	68.240	ENSMGAG00000010598	LARP4	93	67.618	Meleagris_gallopavo
ENSDORG00000004013	Larp4	99	81.145	ENSMICG00000030156	-	99	81.145	Microcebus_murinus
ENSDORG00000004013	Larp4	87	85.714	ENSMICG00000012388	-	99	85.714	Microcebus_murinus
ENSDORG00000004013	Larp4	100	84.254	ENSMOCG00000020635	Larp4	100	84.254	Microtus_ochrogaster
ENSDORG00000004013	Larp4	99	44.898	ENSMMOG00000004785	larp4aa	95	44.572	Mola_mola
ENSDORG00000004013	Larp4	100	39.550	ENSMMOG00000021861	larp4ab	94	50.000	Mola_mola
ENSDORG00000004013	Larp4	95	74.825	MGP_CAROLIEiJ_G0020281	Larp4	97	74.685	Mus_caroli
ENSDORG00000004013	Larp4	100	84.945	ENSMUSG00000023025	Larp4	100	84.945	Mus_musculus
ENSDORG00000004013	Larp4	100	85.221	MGP_PahariEiJ_G0020284	Larp4	100	85.221	Mus_pahari
ENSDORG00000004013	Larp4	99	87.083	ENSMPUG00000008706	LARP4	96	87.083	Mustela_putorius_furo
ENSDORG00000004013	Larp4	100	84.552	ENSMLUG00000012513	-	100	84.457	Myotis_lucifugus
ENSDORG00000004013	Larp4	100	83.425	ENSNGAG00000001577	-	100	83.425	Nannospalax_galili
ENSDORG00000004013	Larp4	50	50.000	ENSNBRG00000015675	larp4ab	99	50.000	Neolamprologus_brichardi
ENSDORG00000004013	Larp4	100	86.740	ENSNLEG00000017798	LARP4	100	86.740	Nomascus_leucogenys
ENSDORG00000004013	Larp4	68	76.151	ENSOPRG00000004592	-	80	76.151	Ochotona_princeps
ENSDORG00000004013	Larp4	99	82.148	ENSODEG00000009770	LARP4	100	82.148	Octodon_degus
ENSDORG00000004013	Larp4	100	41.425	ENSONIG00000019124	larp4ab	100	41.107	Oreochromis_niloticus
ENSDORG00000004013	Larp4	100	46.144	ENSONIG00000011895	larp4aa	99	46.401	Oreochromis_niloticus
ENSDORG00000004013	Larp4	73	71.296	ENSOANG00000004373	LARP4	97	70.741	Ornithorhynchus_anatinus
ENSDORG00000004013	Larp4	100	84.690	ENSOCUG00000021417	-	100	84.690	Oryctolagus_cuniculus
ENSDORG00000004013	Larp4	100	83.586	ENSOCUG00000026872	-	99	83.586	Oryctolagus_cuniculus
ENSDORG00000004013	Larp4	99	47.668	ENSORLG00000006758	larp4aa	95	46.641	Oryzias_latipes
ENSDORG00000004013	Larp4	99	47.409	ENSORLG00020010258	larp4aa	95	46.512	Oryzias_latipes_hni
ENSDORG00000004013	Larp4	99	47.539	ENSORLG00015002292	larp4aa	95	46.641	Oryzias_latipes_hsok
ENSDORG00000004013	Larp4	99	47.861	ENSOMEG00000019749	larp4aa	97	60.714	Oryzias_melastigma
ENSDORG00000004013	Larp4	70	86.434	ENSOGAG00000001415	LARP4	99	86.434	Otolemur_garnettii
ENSDORG00000004013	Larp4	100	84.311	ENSOARG00000017702	LARP4	99	84.311	Ovis_aries
ENSDORG00000004013	Larp4	89	85.812	ENSPPAG00000035100	LARP4	97	86.631	Pan_paniscus
ENSDORG00000004013	Larp4	62	67.770	ENSPPAG00000039122	-	96	71.533	Pan_paniscus
ENSDORG00000004013	Larp4	100	87.724	ENSPPRG00000004522	LARP4	100	87.724	Panthera_pardus
ENSDORG00000004013	Larp4	100	87.724	ENSPTIG00000015617	LARP4	100	87.724	Panthera_tigris_altaica
ENSDORG00000004013	Larp4	100	86.069	ENSPTRG00000004935	LARP4	100	86.069	Pan_troglodytes
ENSDORG00000004013	Larp4	62	67.770	ENSPTRG00000045907	-	98	73.171	Pan_troglodytes
ENSDORG00000004013	Larp4	100	86.047	ENSPANG00000022964	LARP4	100	86.718	Papio_anubis
ENSDORG00000004013	Larp4	100	46.992	ENSPKIG00000005950	larp4ab	100	45.614	Paramormyrops_kingsleyae
ENSDORG00000004013	Larp4	99	68.269	ENSPSIG00000015867	LARP4	99	67.857	Pelodiscus_sinensis
ENSDORG00000004013	Larp4	50	50.266	ENSPMGG00000002719	larp4ab	98	51.862	Periophthalmus_magnuspinnatus
ENSDORG00000004013	Larp4	99	78.591	ENSPEMG00000018433	Larp4	94	83.929	Peromyscus_maniculatus_bairdii
ENSDORG00000004013	Larp4	100	74.659	ENSPCIG00000000384	LARP4	100	74.251	Phascolarctos_cinereus
ENSDORG00000004013	Larp4	99	42.914	ENSPFOG00000009764	larp4ab	99	42.517	Poecilia_formosa
ENSDORG00000004013	Larp4	88	57.031	ENSPFOG00000013148	larp4aa	82	57.407	Poecilia_formosa
ENSDORG00000004013	Larp4	99	42.649	ENSPLAG00000008502	larp4ab	99	41.965	Poecilia_latipinna
ENSDORG00000004013	Larp4	99	42.328	ENSPMEG00000002720	larp4ab	99	42.216	Poecilia_mexicana
ENSDORG00000004013	Larp4	99	45.340	ENSPMEG00000014271	larp4aa	82	57.407	Poecilia_mexicana
ENSDORG00000004013	Larp4	50	55.319	ENSPREG00000016263	larp4ab	99	57.769	Poecilia_reticulata
ENSDORG00000004013	Larp4	70	86.240	ENSPPYG00000004512	-	100	86.240	Pongo_abelii
ENSDORG00000004013	Larp4	92	76.269	ENSPCAG00000003671	LARP4	99	76.269	Procavia_capensis
ENSDORG00000004013	Larp4	87	90.875	ENSPCOG00000026291	LARP4	98	90.875	Propithecus_coquereli
ENSDORG00000004013	Larp4	92	79.552	ENSPVAG00000016840	LARP4	91	79.552	Pteropus_vampyrus
ENSDORG00000004013	Larp4	50	58.133	ENSPNYG00000022265	larp4aa	95	45.512	Pundamilia_nyererei
ENSDORG00000004013	Larp4	100	45.302	ENSPNAG00000014478	larp4ab	100	46.392	Pygocentrus_nattereri
ENSDORG00000004013	Larp4	96	46.917	ENSPNAG00000024770	larp4aa	94	47.645	Pygocentrus_nattereri
ENSDORG00000004013	Larp4	89	81.102	ENSRBIG00000036890	-	100	68.085	Rhinopithecus_bieti
ENSDORG00000004013	Larp4	100	74.486	ENSRBIG00000038857	-	99	87.302	Rhinopithecus_bieti
ENSDORG00000004013	Larp4	100	77.317	ENSRROG00000025487	-	100	77.317	Rhinopithecus_roxellana
ENSDORG00000004013	Larp4	100	85.871	ENSRROG00000042764	-	99	87.528	Rhinopithecus_roxellana
ENSDORG00000004013	Larp4	100	84.828	ENSSBOG00000026650	LARP4	100	85.191	Saimiri_boliviensis_boliviensis
ENSDORG00000004013	Larp4	100	49.272	ENSSFOG00015003868	larp4aa	100	48.477	Scleropages_formosus
ENSDORG00000004013	Larp4	100	46.054	ENSSFOG00015014096	larp4ab	100	46.831	Scleropages_formosus
ENSDORG00000004013	Larp4	99	43.540	ENSSMAG00000002838	larp4ab	99	43.709	Scophthalmus_maximus
ENSDORG00000004013	Larp4	88	58.594	ENSSDUG00000010621	larp4aa	84	58.594	Seriola_dumerili
ENSDORG00000004013	Larp4	99	43.059	ENSSDUG00000006655	larp4ab	99	43.517	Seriola_dumerili
ENSDORG00000004013	Larp4	99	43.590	ENSSLDG00000001791	larp4ab	99	44.228	Seriola_lalandi_dorsalis
ENSDORG00000004013	Larp4	88	58.333	ENSSLDG00000004942	larp4aa	84	58.333	Seriola_lalandi_dorsalis
ENSDORG00000004013	Larp4	99	79.172	ENSSARG00000012469	LARP4	100	79.172	Sorex_araneus
ENSDORG00000004013	Larp4	95	65.670	ENSSPUG00000016552	LARP4	93	65.812	Sphenodon_punctatus
ENSDORG00000004013	Larp4	99	43.725	ENSSPAG00000002172	larp4ab	99	42.857	Stegastes_partitus
ENSDORG00000004013	Larp4	99	46.042	ENSSPAG00000007222	larp4aa	98	57.880	Stegastes_partitus
ENSDORG00000004013	Larp4	100	86.226	ENSSSCG00000028516	LARP4	100	86.226	Sus_scrofa
ENSDORG00000004013	Larp4	100	66.712	ENSTGUG00000003479	LARP4	100	67.258	Taeniopygia_guttata
ENSDORG00000004013	Larp4	69	47.992	ENSTRUG00000007206	larp4ab	99	42.202	Takifugu_rubripes
ENSDORG00000004013	Larp4	99	46.013	ENSTNIG00000015109	larp4aa	99	46.527	Tetraodon_nigroviridis
ENSDORG00000004013	Larp4	99	41.700	ENSTNIG00000014571	larp4ab	99	41.848	Tetraodon_nigroviridis
ENSDORG00000004013	Larp4	99	73.757	ENSTBEG00000005167	LARP4	100	73.757	Tupaia_belangeri
ENSDORG00000004013	Larp4	100	84.110	ENSTTRG00000003764	LARP4	99	84.690	Tursiops_truncatus
ENSDORG00000004013	Larp4	71	86.408	ENSUAMG00000013764	LARP4	99	87.302	Ursus_americanus
ENSDORG00000004013	Larp4	100	86.740	ENSUMAG00000008473	LARP4	100	86.740	Ursus_maritimus
ENSDORG00000004013	Larp4	100	85.170	ENSVPAG00000010136	LARP4	100	84.783	Vicugna_pacos
ENSDORG00000004013	Larp4	100	86.878	ENSVVUG00000024717	LARP4	100	86.878	Vulpes_vulpes
ENSDORG00000004013	Larp4	92	58.213	ENSXETG00000007283	larp4	100	56.772	Xenopus_tropicalis
ENSDORG00000004013	Larp4	50	54.211	ENSXCOG00000019635	larp4ab	99	53.937	Xiphophorus_couchianus
ENSDORG00000004013	Larp4	99	42.914	ENSXMAG00000002156	larp4ab	99	42.384	Xiphophorus_maculatus