EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000004073 (Gene tree)
Gene ID: 106003178
Gene Symbol: Tsen54
Alias: -
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 8757 bases
Position: chrKN672353.1:3929336-3938092
Accession: 106003178
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000003805	tRNA_int_end_N2	PF12928.7	6.3e-19	1	1
ENSDORP00000016793	tRNA_int_end_N2	PF12928.7	7.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000004073	-	1461	-	ENSDORP00000003805	486 (aa)	-	UPI000BACF42C
ENSDORT00000034608	-	1921	XM_013038004	ENSDORP00000016793	525 (aa)	XP_012893458	A0A1S3GX34

Gene Model

Click here to download ENSDORG00000004073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000004073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000004073	Tsen54	100	83.460	ENSG00000182173	TSEN54	99	92.857	Homo_sapiens
ENSDORG00000004073	Tsen54	97	47.471	ENSAPOG00000009659	tsen54	99	45.283	Acanthochromis_polyacanthus
ENSDORG00000004073	Tsen54	99	79.245	ENSAMEG00000009414	TSEN54	99	79.811	Ailuropoda_melanoleuca
ENSDORG00000004073	Tsen54	97	47.151	ENSAOCG00000000152	tsen54	95	47.151	Amphiprion_ocellaris
ENSDORG00000004073	Tsen54	97	46.955	ENSAPEG00000018931	tsen54	94	46.955	Amphiprion_percula
ENSDORG00000004073	Tsen54	97	44.933	ENSATEG00000019860	tsen54	97	44.914	Anabas_testudineus
ENSDORG00000004073	Tsen54	86	51.410	ENSAPLG00000009419	TSEN54	100	51.193	Anas_platyrhynchos
ENSDORG00000004073	Tsen54	99	52.068	ENSACAG00000006714	TSEN54	99	51.515	Anolis_carolinensis
ENSDORG00000004073	Tsen54	99	84.586	ENSANAG00000024061	TSEN54	99	84.762	Aotus_nancymaae
ENSDORG00000004073	Tsen54	97	46.471	ENSACLG00000019800	tsen54	96	46.471	Astatotilapia_calliptera
ENSDORG00000004073	Tsen54	97	47.244	ENSAMXG00000006546	tsen54	96	47.244	Astyanax_mexicanus
ENSDORG00000004073	Tsen54	100	81.321	ENSBTAG00000000824	TSEN54	100	80.943	Bos_taurus
ENSDORG00000004073	Tsen54	99	82.852	ENSCJAG00000014278	TSEN54	99	83.048	Callithrix_jacchus
ENSDORG00000004073	Tsen54	100	82.674	ENSCAFG00000004798	TSEN54	100	82.863	Canis_familiaris
ENSDORG00000004073	Tsen54	100	82.674	ENSCAFG00020000312	TSEN54	100	82.863	Canis_lupus_dingo
ENSDORG00000004073	Tsen54	100	81.714	ENSCHIG00000019908	TSEN54	100	81.143	Capra_hircus
ENSDORG00000004073	Tsen54	86	80.659	ENSTSYG00000037439	TSEN54	100	80.879	Carlito_syrichta
ENSDORG00000004073	Tsen54	99	84.008	ENSCCAG00000036624	TSEN54	99	84.000	Cebus_capucinus
ENSDORG00000004073	Tsen54	97	84.766	ENSCATG00000042877	TSEN54	99	84.571	Cercocebus_atys
ENSDORG00000004073	Tsen54	97	83.898	ENSCLAG00000002924	TSEN54	99	83.505	Chinchilla_lanigera
ENSDORG00000004073	Tsen54	100	84.030	ENSCSAG00000004809	TSEN54	100	84.221	Chlorocebus_sabaeus
ENSDORG00000004073	Tsen54	99	55.472	ENSCPBG00000028071	TSEN54	99	55.094	Chrysemys_picta_bellii
ENSDORG00000004073	Tsen54	100	84.221	ENSCANG00000028053	TSEN54	100	84.221	Colobus_angolensis_palliatus
ENSDORG00000004073	Tsen54	100	84.190	ENSCGRG00001020029	Tsen54	100	84.190	Cricetulus_griseus_chok1gshd
ENSDORG00000004073	Tsen54	84	83.032	ENSCGRG00000016289	Tsen54	100	83.032	Cricetulus_griseus_crigri
ENSDORG00000004073	Tsen54	80	39.578	ENSCSEG00000020586	tsen54	99	38.679	Cynoglossus_semilaevis
ENSDORG00000004073	Tsen54	80	44.208	ENSDARG00000036844	tsen54	99	45.154	Danio_rerio
ENSDORG00000004073	Tsen54	100	77.444	ENSDNOG00000018452	TSEN54	100	77.589	Dasypus_novemcinctus
ENSDORG00000004073	Tsen54	97	36.792	ENSEBUG00000005203	TSEN54	69	58.108	Eptatretus_burgeri
ENSDORG00000004073	Tsen54	100	82.453	ENSEASG00005000579	TSEN54	100	81.509	Equus_asinus_asinus
ENSDORG00000004073	Tsen54	100	82.453	ENSECAG00000004924	TSEN54	100	81.509	Equus_caballus
ENSDORG00000004073	Tsen54	86	76.805	ENSEEUG00000008467	TSEN54	100	77.243	Erinaceus_europaeus
ENSDORG00000004073	Tsen54	97	44.340	ENSELUG00000017703	tsen54	90	44.886	Esox_lucius
ENSDORG00000004073	Tsen54	99	82.576	ENSFCAG00000023712	TSEN54	99	82.008	Felis_catus
ENSDORG00000004073	Tsen54	98	51.167	ENSFALG00000001119	TSEN54	99	50.760	Ficedula_albicollis
ENSDORG00000004073	Tsen54	86	83.149	ENSFDAG00000019090	TSEN54	99	83.149	Fukomys_damarensis
ENSDORG00000004073	Tsen54	97	47.451	ENSFHEG00000005470	tsen54	96	46.863	Fundulus_heteroclitus
ENSDORG00000004073	Tsen54	79	47.024	ENSGMOG00000013146	tsen54	96	47.024	Gadus_morhua
ENSDORG00000004073	Tsen54	95	48.521	ENSGALG00000047163	TSEN54	98	48.521	Gallus_gallus
ENSDORG00000004073	Tsen54	99	46.355	ENSGAFG00000005111	tsen54	99	46.679	Gambusia_affinis
ENSDORG00000004073	Tsen54	96	44.123	ENSGACG00000014987	tsen54	99	44.123	Gasterosteus_aculeatus
ENSDORG00000004073	Tsen54	100	55.680	ENSGAGG00000006825	TSEN54	99	55.307	Gopherus_agassizii
ENSDORG00000004073	Tsen54	97	83.465	ENSGGOG00000009417	TSEN54	100	83.661	Gorilla_gorilla
ENSDORG00000004073	Tsen54	87	45.119	ENSHBUG00000018296	tsen54	99	38.389	Haplochromis_burtoni
ENSDORG00000004073	Tsen54	100	84.190	ENSHGLG00000007979	TSEN54	100	84.190	Heterocephalus_glaber_female
ENSDORG00000004073	Tsen54	100	83.238	ENSHGLG00100005497	TSEN54	100	83.238	Heterocephalus_glaber_male
ENSDORG00000004073	Tsen54	80	41.686	ENSHCOG00000007481	tsen54	99	40.984	Hippocampus_comes
ENSDORG00000004073	Tsen54	99	41.978	ENSIPUG00000000590	tsen54	79	60.119	Ictalurus_punctatus
ENSDORG00000004073	Tsen54	100	81.143	ENSSTOG00000012883	TSEN54	100	81.143	Ictidomys_tridecemlineatus
ENSDORG00000004073	Tsen54	100	83.302	ENSJJAG00000007365	Tsen54	100	83.302	Jaculus_jaculus
ENSDORG00000004073	Tsen54	97	45.644	ENSKMAG00000006944	tsen54	97	45.905	Kryptolebias_marmoratus
ENSDORG00000004073	Tsen54	97	44.358	ENSLBEG00000004199	tsen54	97	44.123	Labrus_bergylta
ENSDORG00000004073	Tsen54	97	47.409	ENSLACG00000009497	TSEN54	100	46.833	Latimeria_chalumnae
ENSDORG00000004073	Tsen54	97	47.015	ENSLOCG00000011191	tsen54	97	46.591	Lepisosteus_oculatus
ENSDORG00000004073	Tsen54	100	75.000	ENSLAFG00000011655	TSEN54	100	74.765	Loxodonta_africana
ENSDORG00000004073	Tsen54	100	83.840	ENSMFAG00000000712	TSEN54	100	84.030	Macaca_fascicularis
ENSDORG00000004073	Tsen54	100	83.650	ENSMNEG00000029199	TSEN54	100	83.840	Macaca_nemestrina
ENSDORG00000004073	Tsen54	86	83.186	ENSMLEG00000044168	TSEN54	88	83.407	Mandrillus_leucophaeus
ENSDORG00000004073	Tsen54	97	43.561	ENSMAMG00000019773	tsen54	97	44.101	Mastacembelus_armatus
ENSDORG00000004073	Tsen54	97	46.471	ENSMZEG00005000884	tsen54	96	46.471	Maylandia_zebra
ENSDORG00000004073	Tsen54	99	49.248	ENSMGAG00000009556	TSEN54	99	49.248	Meleagris_gallopavo
ENSDORG00000004073	Tsen54	100	83.048	ENSMAUG00000016838	Tsen54	100	83.048	Mesocricetus_auratus
ENSDORG00000004073	Tsen54	100	82.129	ENSMICG00000044012	TSEN54	100	82.890	Microcebus_murinus
ENSDORG00000004073	Tsen54	100	84.000	ENSMOCG00000021585	Tsen54	100	84.000	Microtus_ochrogaster
ENSDORG00000004073	Tsen54	73	62.987	ENSMMOG00000020189	tsen54	85	62.987	Mola_mola
ENSDORG00000004073	Tsen54	98	67.170	ENSMODG00000007438	TSEN54	98	66.914	Monodelphis_domestica
ENSDORG00000004073	Tsen54	99	43.680	ENSMALG00000020573	tsen54	99	43.902	Monopterus_albus
ENSDORG00000004073	Tsen54	100	81.333	MGP_CAROLIEiJ_G0017417	Tsen54	100	81.333	Mus_caroli
ENSDORG00000004073	Tsen54	100	81.143	ENSMUSG00000020781	Tsen54	100	81.143	Mus_musculus
ENSDORG00000004073	Tsen54	100	81.524	MGP_PahariEiJ_G0018547	Tsen54	100	81.524	Mus_pahari
ENSDORG00000004073	Tsen54	100	81.524	MGP_SPRETEiJ_G0018262	Tsen54	100	81.524	Mus_spretus
ENSDORG00000004073	Tsen54	100	80.791	ENSMPUG00000013870	TSEN54	100	80.791	Mustela_putorius_furo
ENSDORG00000004073	Tsen54	100	77.966	ENSMLUG00000015298	TSEN54	100	77.589	Myotis_lucifugus
ENSDORG00000004073	Tsen54	100	83.048	ENSNGAG00000015673	Tsen54	100	83.048	Nannospalax_galili
ENSDORG00000004073	Tsen54	89	64.454	ENSMEUG00000011908	TSEN54	100	64.454	Notamacropus_eugenii
ENSDORG00000004073	Tsen54	100	74.953	ENSOPRG00000012513	TSEN54	100	74.953	Ochotona_princeps
ENSDORG00000004073	Tsen54	97	46.471	ENSONIG00000009543	tsen54	96	46.471	Oreochromis_niloticus
ENSDORG00000004073	Tsen54	99	72.983	ENSOCUG00000009875	TSEN54	99	73.734	Oryctolagus_cuniculus
ENSDORG00000004073	Tsen54	97	44.685	ENSORLG00000000852	tsen54	97	44.685	Oryzias_latipes
ENSDORG00000004073	Tsen54	97	45.079	ENSORLG00020018221	tsen54	97	45.079	Oryzias_latipes_hni
ENSDORG00000004073	Tsen54	97	45.669	ENSORLG00015009413	tsen54	98	45.276	Oryzias_latipes_hsok
ENSDORG00000004073	Tsen54	97	45.472	ENSOMEG00000014402	tsen54	94	45.472	Oryzias_melastigma
ENSDORG00000004073	Tsen54	100	80.038	ENSOGAG00000001442	TSEN54	100	80.038	Otolemur_garnettii
ENSDORG00000004073	Tsen54	86	78.728	ENSOARG00000010361	TSEN54	100	78.728	Ovis_aries
ENSDORG00000004073	Tsen54	94	83.065	ENSPPAG00000043519	TSEN54	100	83.065	Pan_paniscus
ENSDORG00000004073	Tsen54	99	82.955	ENSPPRG00000009162	TSEN54	99	82.386	Panthera_pardus
ENSDORG00000004073	Tsen54	86	82.301	ENSPTIG00000019312	TSEN54	96	82.080	Panthera_tigris_altaica
ENSDORG00000004073	Tsen54	100	83.650	ENSPTRG00000009646	TSEN54	100	83.840	Pan_troglodytes
ENSDORG00000004073	Tsen54	99	83.619	ENSPANG00000020133	TSEN54	99	83.810	Papio_anubis
ENSDORG00000004073	Tsen54	97	44.809	ENSPKIG00000023018	tsen54	100	44.598	Paramormyrops_kingsleyae
ENSDORG00000004073	Tsen54	80	51.402	ENSPSIG00000012807	TSEN54	99	50.935	Pelodiscus_sinensis
ENSDORG00000004073	Tsen54	92	36.253	ENSPMGG00000019578	tsen54	99	35.642	Periophthalmus_magnuspinnatus
ENSDORG00000004073	Tsen54	100	84.381	ENSPEMG00000014857	Tsen54	100	84.381	Peromyscus_maniculatus_bairdii
ENSDORG00000004073	Tsen54	99	46.617	ENSPFOG00000022740	tsen54	96	47.563	Poecilia_formosa
ENSDORG00000004073	Tsen54	97	48.054	ENSPLAG00000014847	tsen54	96	47.843	Poecilia_latipinna
ENSDORG00000004073	Tsen54	99	46.792	ENSPMEG00000022876	tsen54	96	47.451	Poecilia_mexicana
ENSDORG00000004073	Tsen54	99	46.476	ENSPREG00000013090	tsen54	99	46.578	Poecilia_reticulata
ENSDORG00000004073	Tsen54	91	78.914	ENSPPYG00000008629	TSEN54	100	79.332	Pongo_abelii
ENSDORG00000004073	Tsen54	95	70.158	ENSPCAG00000002093	TSEN54	99	70.158	Procavia_capensis
ENSDORG00000004073	Tsen54	100	84.411	ENSPCOG00000027880	TSEN54	100	85.171	Propithecus_coquereli
ENSDORG00000004073	Tsen54	100	83.239	ENSPVAG00000008446	TSEN54	100	82.863	Pteropus_vampyrus
ENSDORG00000004073	Tsen54	92	45.287	ENSPNYG00000010217	tsen54	99	45.287	Pundamilia_nyererei
ENSDORG00000004073	Tsen54	97	45.857	ENSPNAG00000003770	tsen54	97	45.349	Pygocentrus_nattereri
ENSDORG00000004073	Tsen54	100	81.524	ENSRNOG00000004598	Tsen54	100	81.524	Rattus_norvegicus
ENSDORG00000004073	Tsen54	100	84.411	ENSRBIG00000043040	TSEN54	100	84.411	Rhinopithecus_bieti
ENSDORG00000004073	Tsen54	100	84.221	ENSRROG00000030797	TSEN54	100	84.221	Rhinopithecus_roxellana
ENSDORG00000004073	Tsen54	99	80.571	ENSSBOG00000013543	TSEN54	99	80.762	Saimiri_boliviensis_boliviensis
ENSDORG00000004073	Tsen54	99	65.858	ENSSHAG00000018127	TSEN54	98	65.485	Sarcophilus_harrisii
ENSDORG00000004073	Tsen54	81	46.154	ENSSFOG00015004093	tsen54	100	45.667	Scleropages_formosus
ENSDORG00000004073	Tsen54	97	44.338	ENSSMAG00000012449	tsen54	99	44.530	Scophthalmus_maximus
ENSDORG00000004073	Tsen54	97	46.821	ENSSDUG00000021506	tsen54	97	46.887	Seriola_dumerili
ENSDORG00000004073	Tsen54	97	46.731	ENSSLDG00000016303	tsen54	97	46.796	Seriola_lalandi_dorsalis
ENSDORG00000004073	Tsen54	86	50.234	ENSSPUG00000008988	TSEN54	100	49.661	Sphenodon_punctatus
ENSDORG00000004073	Tsen54	92	46.122	ENSSPAG00000008098	-	99	45.473	Stegastes_partitus
ENSDORG00000004073	Tsen54	80	42.553	ENSSPAG00000008047	tsen54	99	41.608	Stegastes_partitus
ENSDORG00000004073	Tsen54	100	81.733	ENSSSCG00000036852	TSEN54	100	80.979	Sus_scrofa
ENSDORG00000004073	Tsen54	86	51.549	ENSTGUG00000008548	TSEN54	100	51.549	Taeniopygia_guttata
ENSDORG00000004073	Tsen54	97	45.776	ENSTRUG00000004230	tsen54	96	45.580	Takifugu_rubripes
ENSDORG00000004073	Tsen54	99	45.333	ENSTNIG00000011281	tsen54	99	45.524	Tetraodon_nigroviridis
ENSDORG00000004073	Tsen54	86	82.096	ENSTTRG00000015828	TSEN54	100	81.223	Tursiops_truncatus
ENSDORG00000004073	Tsen54	81	78.605	ENSUAMG00000010045	TSEN54	100	78.140	Ursus_americanus
ENSDORG00000004073	Tsen54	84	78.876	ENSUMAG00000008979	TSEN54	100	78.876	Ursus_maritimus
ENSDORG00000004073	Tsen54	97	82.261	ENSVVUG00000011411	TSEN54	98	82.330	Vulpes_vulpes
ENSDORG00000004073	Tsen54	99	48.593	ENSXETG00000012532	tsen54	99	70.000	Xenopus_tropicalis
ENSDORG00000004073	Tsen54	97	41.257	ENSXCOG00000018245	tsen54	85	62.658	Xiphophorus_couchianus
ENSDORG00000004073	Tsen54	97	47.297	ENSXMAG00000018818	tsen54	96	48.235	Xiphophorus_maculatus