EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000004199 (Gene tree)
Gene ID: 105998509
Gene Symbol: Ddx42
Alias: 1810047H21Rik|B430002H05Rik|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 22496 bases
Position: chrKN672511.1:163832-186327
Accession: 105998509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000003923	DEAD	PF00270.29	2.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000004199	-	2670	XM_013033236	ENSDORP00000003923	889 (aa)	XP_012888690	UPI000BAD067E

Gene Model

Click here to download ENSDORG00000004199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000004199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000004199	Ddx42	51	34.737	ENSDORG00000010781	Ddx41	74	34.737
ENSDORG00000004199	Ddx42	53	37.014	ENSDORG00000004866	Ddx5	76	37.552
ENSDORG00000004199	Ddx42	50	32.080	ENSDORG00000007702	Ddx59	72	32.080

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000004199	Ddx42	100	86.943	ENSG00000198231	DDX42	98	93.237	Homo_sapiens
ENSDORG00000004199	Ddx42	90	69.123	ENSAPOG00000017675	ddx42	99	67.519	Acanthochromis_polyacanthus
ENSDORG00000004199	Ddx42	100	87.207	ENSAMEG00000003200	DDX42	100	87.527	Ailuropoda_melanoleuca
ENSDORG00000004199	Ddx42	88	67.378	ENSACIG00000007376	ddx42	99	68.797	Amphilophus_citrinellus
ENSDORG00000004199	Ddx42	90	69.249	ENSAOCG00000003520	ddx42	99	65.717	Amphiprion_ocellaris
ENSDORG00000004199	Ddx42	100	64.105	ENSAPEG00000000984	ddx42	99	66.100	Amphiprion_percula
ENSDORG00000004199	Ddx42	99	64.601	ENSATEG00000022920	ddx42	99	67.056	Anabas_testudineus
ENSDORG00000004199	Ddx42	100	76.744	ENSAPLG00000010544	DDX42	100	77.474	Anas_platyrhynchos
ENSDORG00000004199	Ddx42	100	78.108	ENSACAG00000003994	DDX42	99	78.450	Anolis_carolinensis
ENSDORG00000004199	Ddx42	100	87.876	ENSANAG00000035693	DDX42	99	92.948	Aotus_nancymaae
ENSDORG00000004199	Ddx42	90	69.204	ENSACLG00000025113	ddx42	99	66.702	Astatotilapia_calliptera
ENSDORG00000004199	Ddx42	80	72.859	ENSAMXG00000011435	ddx42	99	63.505	Astyanax_mexicanus
ENSDORG00000004199	Ddx42	100	85.745	ENSBTAG00000021058	DDX42	97	91.810	Bos_taurus
ENSDORG00000004199	Ddx42	67	48.980	WBGene00008119	C46F11.4	77	48.899	Caenorhabditis_elegans
ENSDORG00000004199	Ddx42	100	88.103	ENSCJAG00000019649	DDX42	97	93.410	Callithrix_jacchus
ENSDORG00000004199	Ddx42	100	87.100	ENSCAFG00000012818	DDX42	100	87.420	Canis_familiaris
ENSDORG00000004199	Ddx42	100	87.207	ENSCAFG00020026631	DDX42	100	87.527	Canis_lupus_dingo
ENSDORG00000004199	Ddx42	100	86.108	ENSCHIG00000014431	DDX42	100	86.426	Capra_hircus
ENSDORG00000004199	Ddx42	100	86.794	ENSTSYG00000001380	DDX42	100	87.114	Carlito_syrichta
ENSDORG00000004199	Ddx42	76	70.674	ENSCAPG00000013621	DDX42	94	70.674	Cavia_aperea
ENSDORG00000004199	Ddx42	100	87.554	ENSCPOG00000005633	DDX42	100	88.090	Cavia_porcellus
ENSDORG00000004199	Ddx42	100	91.061	ENSCCAG00000020612	DDX42	100	91.061	Cebus_capucinus
ENSDORG00000004199	Ddx42	100	87.460	ENSCATG00000030490	DDX42	100	87.781	Cercocebus_atys
ENSDORG00000004199	Ddx42	100	87.889	ENSCLAG00000003497	DDX42	100	88.210	Chinchilla_lanigera
ENSDORG00000004199	Ddx42	100	83.421	ENSCSAG00000003914	DDX42	100	83.738	Chlorocebus_sabaeus
ENSDORG00000004199	Ddx42	78	95.536	ENSCHOG00000006241	DDX42	79	95.536	Choloepus_hoffmanni
ENSDORG00000004199	Ddx42	100	77.211	ENSCPBG00000026682	DDX42	100	77.523	Chrysemys_picta_bellii
ENSDORG00000004199	Ddx42	50	61.161	ENSCING00000001837	-	94	62.558	Ciona_intestinalis
ENSDORG00000004199	Ddx42	100	87.353	ENSCANG00000034663	DDX42	99	93.094	Colobus_angolensis_palliatus
ENSDORG00000004199	Ddx42	100	86.403	ENSCGRG00001009775	Ddx42	100	86.938	Cricetulus_griseus_chok1gshd
ENSDORG00000004199	Ddx42	100	86.403	ENSCGRG00000011718	Ddx42	100	86.938	Cricetulus_griseus_crigri
ENSDORG00000004199	Ddx42	90	67.059	ENSCSEG00000021574	ddx42	99	63.868	Cynoglossus_semilaevis
ENSDORG00000004199	Ddx42	100	64.385	ENSCVAG00000011404	ddx42	99	64.612	Cyprinodon_variegatus
ENSDORG00000004199	Ddx42	100	63.543	ENSDARG00000037928	ddx42	99	65.405	Danio_rerio
ENSDORG00000004199	Ddx42	100	81.363	ENSDNOG00000007961	DDX42	100	81.363	Dasypus_novemcinctus
ENSDORG00000004199	Ddx42	65	55.863	FBgn0036104	CG6418	72	58.844	Drosophila_melanogaster
ENSDORG00000004199	Ddx42	79	66.799	ENSEBUG00000001155	ddx42	93	64.565	Eptatretus_burgeri
ENSDORG00000004199	Ddx42	100	87.646	ENSEASG00005013089	DDX42	99	92.593	Equus_asinus_asinus
ENSDORG00000004199	Ddx42	100	87.540	ENSECAG00000022684	DDX42	100	87.859	Equus_caballus
ENSDORG00000004199	Ddx42	66	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSDORG00000004199	Ddx42	100	63.417	ENSELUG00000020593	ddx42	100	64.421	Esox_lucius
ENSDORG00000004199	Ddx42	100	87.953	ENSFCAG00000003499	DDX42	98	91.688	Felis_catus
ENSDORG00000004199	Ddx42	94	77.915	ENSFALG00000004675	DDX42	78	78.027	Ficedula_albicollis
ENSDORG00000004199	Ddx42	100	87.807	ENSFDAG00000020516	DDX42	100	88.128	Fukomys_damarensis
ENSDORG00000004199	Ddx42	99	62.990	ENSFHEG00000023290	ddx42	99	64.482	Fundulus_heteroclitus
ENSDORG00000004199	Ddx42	75	72.676	ENSGMOG00000004595	ddx42	88	72.817	Gadus_morhua
ENSDORG00000004199	Ddx42	100	75.567	ENSGALG00000000581	DDX42	100	75.979	Gallus_gallus
ENSDORG00000004199	Ddx42	92	66.136	ENSGAFG00000011846	ddx42	97	66.519	Gambusia_affinis
ENSDORG00000004199	Ddx42	99	64.354	ENSGACG00000009782	ddx42	99	64.354	Gasterosteus_aculeatus
ENSDORG00000004199	Ddx42	100	76.642	ENSGAGG00000024411	DDX42	99	77.164	Gopherus_agassizii
ENSDORG00000004199	Ddx42	100	87.353	ENSGGOG00000006779	DDX42	97	93.123	Gorilla_gorilla
ENSDORG00000004199	Ddx42	90	69.647	ENSHBUG00000008705	ddx42	99	66.808	Haplochromis_burtoni
ENSDORG00000004199	Ddx42	100	83.173	ENSHGLG00000010024	DDX42	100	83.494	Heterocephalus_glaber_female
ENSDORG00000004199	Ddx42	100	86.994	ENSHGLG00100004479	-	100	87.313	Heterocephalus_glaber_male
ENSDORG00000004199	Ddx42	94	68.847	ENSHGLG00100007138	-	91	68.847	Heterocephalus_glaber_male
ENSDORG00000004199	Ddx42	84	70.446	ENSHCOG00000003357	ddx42	99	65.122	Hippocampus_comes
ENSDORG00000004199	Ddx42	80	72.200	ENSIPUG00000013327	ddx42	100	63.675	Ictalurus_punctatus
ENSDORG00000004199	Ddx42	100	89.305	ENSSTOG00000008922	DDX42	100	89.305	Ictidomys_tridecemlineatus
ENSDORG00000004199	Ddx42	100	87.755	ENSJJAG00000011727	Ddx42	100	88.077	Jaculus_jaculus
ENSDORG00000004199	Ddx42	99	62.813	ENSKMAG00000009914	ddx42	99	65.854	Kryptolebias_marmoratus
ENSDORG00000004199	Ddx42	99	59.786	ENSLBEG00000004687	ddx42	99	61.117	Labrus_bergylta
ENSDORG00000004199	Ddx42	99	68.690	ENSLACG00000013476	DDX42	97	71.123	Latimeria_chalumnae
ENSDORG00000004199	Ddx42	100	68.951	ENSLOCG00000011764	ddx42	100	68.951	Lepisosteus_oculatus
ENSDORG00000004199	Ddx42	100	87.487	ENSLAFG00000003249	DDX42	100	87.646	Loxodonta_africana
ENSDORG00000004199	Ddx42	100	87.245	ENSMFAG00000031356	DDX42	100	87.567	Macaca_fascicularis
ENSDORG00000004199	Ddx42	100	87.634	ENSMMUG00000016762	DDX42	99	90.610	Macaca_mulatta
ENSDORG00000004199	Ddx42	100	87.245	ENSMNEG00000038250	DDX42	100	87.567	Macaca_nemestrina
ENSDORG00000004199	Ddx42	100	86.943	ENSMLEG00000043080	DDX42	100	87.261	Mandrillus_leucophaeus
ENSDORG00000004199	Ddx42	90	69.438	ENSMAMG00000021888	ddx42	98	66.068	Mastacembelus_armatus
ENSDORG00000004199	Ddx42	90	69.204	ENSMZEG00005023103	ddx42	99	66.702	Maylandia_zebra
ENSDORG00000004199	Ddx42	100	76.562	ENSMGAG00000001822	DDX42	100	76.771	Meleagris_gallopavo
ENSDORG00000004199	Ddx42	79	92.124	ENSMAUG00000020774	-	94	92.124	Mesocricetus_auratus
ENSDORG00000004199	Ddx42	100	88.305	ENSMICG00000009952	DDX42	100	88.627	Microcebus_murinus
ENSDORG00000004199	Ddx42	100	86.081	ENSMOCG00000015504	Ddx42	100	86.403	Microtus_ochrogaster
ENSDORG00000004199	Ddx42	90	66.426	ENSMMOG00000016963	ddx42	87	65.581	Mola_mola
ENSDORG00000004199	Ddx42	99	65.121	ENSMALG00000007800	ddx42	99	65.885	Monopterus_albus
ENSDORG00000004199	Ddx42	100	87.366	MGP_CAROLIEiJ_G0017314	Ddx42	100	87.901	Mus_caroli
ENSDORG00000004199	Ddx42	100	87.152	ENSMUSG00000020705	Ddx42	100	87.687	Mus_musculus
ENSDORG00000004199	Ddx42	78	87.463	MGP_PahariEiJ_G0018444	-	100	88.427	Mus_pahari
ENSDORG00000004199	Ddx42	100	87.473	MGP_SPRETEiJ_G0018158	Ddx42	100	88.009	Mus_spretus
ENSDORG00000004199	Ddx42	100	87.169	ENSMPUG00000014921	DDX42	100	87.593	Mustela_putorius_furo
ENSDORG00000004199	Ddx42	100	85.414	ENSMLUG00000011645	DDX42	100	86.569	Myotis_lucifugus
ENSDORG00000004199	Ddx42	100	88.077	ENSNGAG00000021897	Ddx42	100	88.400	Nannospalax_galili
ENSDORG00000004199	Ddx42	90	68.062	ENSNBRG00000004466	ddx42	99	65.295	Neolamprologus_brichardi
ENSDORG00000004199	Ddx42	100	87.970	ENSNLEG00000004248	DDX42	99	93.266	Nomascus_leucogenys
ENSDORG00000004199	Ddx42	77	82.161	ENSMEUG00000013227	-	85	82.161	Notamacropus_eugenii
ENSDORG00000004199	Ddx42	100	86.412	ENSOPRG00000014960	DDX42	100	86.624	Ochotona_princeps
ENSDORG00000004199	Ddx42	100	84.673	ENSODEG00000007810	DDX42	100	84.887	Octodon_degus
ENSDORG00000004199	Ddx42	90	69.412	ENSONIG00000000734	ddx42	99	66.667	Oreochromis_niloticus
ENSDORG00000004199	Ddx42	60	86.506	ENSOANG00000000265	DDX42	99	86.506	Ornithorhynchus_anatinus
ENSDORG00000004199	Ddx42	95	86.592	ENSOCUG00000004304	DDX42	88	86.927	Oryctolagus_cuniculus
ENSDORG00000004199	Ddx42	100	64.643	ENSORLG00000002395	ddx42	100	63.957	Oryzias_latipes
ENSDORG00000004199	Ddx42	100	64.894	ENSORLG00020011621	ddx42	100	65.532	Oryzias_latipes_hni
ENSDORG00000004199	Ddx42	100	63.732	ENSORLG00015004487	ddx42	100	65.319	Oryzias_latipes_hsok
ENSDORG00000004199	Ddx42	90	68.090	ENSOMEG00000020093	ddx42	100	65.111	Oryzias_melastigma
ENSDORG00000004199	Ddx42	100	87.673	ENSOGAG00000006872	DDX42	100	87.991	Otolemur_garnettii
ENSDORG00000004199	Ddx42	100	84.874	ENSOARG00000013540	DDX42	100	85.489	Ovis_aries
ENSDORG00000004199	Ddx42	100	87.567	ENSPPAG00000007496	DDX42	97	93.218	Pan_paniscus
ENSDORG00000004199	Ddx42	100	87.846	ENSPPRG00000002740	DDX42	100	88.060	Panthera_pardus
ENSDORG00000004199	Ddx42	100	87.740	ENSPTIG00000009932	DDX42	100	87.953	Panthera_tigris_altaica
ENSDORG00000004199	Ddx42	100	87.567	ENSPTRG00000009523	DDX42	97	93.218	Pan_troglodytes
ENSDORG00000004199	Ddx42	100	87.245	ENSPANG00000020990	DDX42	100	87.567	Papio_anubis
ENSDORG00000004199	Ddx42	100	63.119	ENSPKIG00000002901	ddx42	99	63.704	Paramormyrops_kingsleyae
ENSDORG00000004199	Ddx42	85	82.389	ENSPSIG00000010289	DDX42	98	82.577	Pelodiscus_sinensis
ENSDORG00000004199	Ddx42	93	66.587	ENSPMGG00000009323	ddx42	100	65.213	Periophthalmus_magnuspinnatus
ENSDORG00000004199	Ddx42	100	86.631	ENSPEMG00000006755	Ddx42	100	87.166	Peromyscus_maniculatus_bairdii
ENSDORG00000004199	Ddx42	79	65.445	ENSPMAG00000005580	ddx42	100	66.053	Petromyzon_marinus
ENSDORG00000004199	Ddx42	100	82.595	ENSPCIG00000009093	DDX42	100	82.911	Phascolarctos_cinereus
ENSDORG00000004199	Ddx42	100	63.665	ENSPFOG00000014104	ddx42	99	65.259	Poecilia_formosa
ENSDORG00000004199	Ddx42	100	63.665	ENSPLAG00000010522	ddx42	99	65.326	Poecilia_latipinna
ENSDORG00000004199	Ddx42	100	64.278	ENSPMEG00000010744	ddx42	99	64.885	Poecilia_mexicana
ENSDORG00000004199	Ddx42	100	63.402	ENSPREG00000009926	ddx42	99	63.797	Poecilia_reticulata
ENSDORG00000004199	Ddx42	100	84.721	ENSPPYG00000008531	DDX42	100	85.037	Pongo_abelii
ENSDORG00000004199	Ddx42	90	88.452	ENSPCAG00000002474	DDX42	96	87.155	Procavia_capensis
ENSDORG00000004199	Ddx42	100	80.371	ENSPCOG00000001559	DDX42	98	85.169	Propithecus_coquereli
ENSDORG00000004199	Ddx42	100	82.766	ENSPVAG00000000160	DDX42	100	83.191	Pteropus_vampyrus
ENSDORG00000004199	Ddx42	79	71.287	ENSPNYG00000013954	ddx42	97	67.835	Pundamilia_nyererei
ENSDORG00000004199	Ddx42	77	72.027	ENSPNAG00000017352	ddx42	99	64.810	Pygocentrus_nattereri
ENSDORG00000004199	Ddx42	100	87.259	ENSRNOG00000009474	Ddx42	100	87.687	Rattus_norvegicus
ENSDORG00000004199	Ddx42	100	87.245	ENSRBIG00000004781	DDX42	99	93.094	Rhinopithecus_bieti
ENSDORG00000004199	Ddx42	100	87.353	ENSRROG00000029794	DDX42	99	90.610	Rhinopithecus_roxellana
ENSDORG00000004199	Ddx42	100	87.889	ENSSBOG00000029624	DDX42	97	92.735	Saimiri_boliviensis_boliviensis
ENSDORG00000004199	Ddx42	74	58.370	ENSSHAG00000007919	-	99	58.370	Sarcophilus_harrisii
ENSDORG00000004199	Ddx42	100	82.911	ENSSHAG00000012896	-	100	83.228	Sarcophilus_harrisii
ENSDORG00000004199	Ddx42	83	71.520	ENSSFOG00015014064	ddx42	83	72.634	Scleropages_formosus
ENSDORG00000004199	Ddx42	99	65.096	ENSSMAG00000009077	ddx42	99	68.943	Scophthalmus_maximus
ENSDORG00000004199	Ddx42	99	65.851	ENSSDUG00000022221	ddx42	99	65.856	Seriola_dumerili
ENSDORG00000004199	Ddx42	99	65.773	ENSSLDG00000018483	ddx42	99	65.458	Seriola_lalandi_dorsalis
ENSDORG00000004199	Ddx42	100	86.794	ENSSARG00000009847	DDX42	100	87.007	Sorex_araneus
ENSDORG00000004199	Ddx42	100	76.611	ENSSPUG00000018806	DDX42	100	76.611	Sphenodon_punctatus
ENSDORG00000004199	Ddx42	100	64.825	ENSSPAG00000013055	ddx42	99	66.064	Stegastes_partitus
ENSDORG00000004199	Ddx42	89	89.864	ENSSSCG00000017289	DDX42	97	89.864	Sus_scrofa
ENSDORG00000004199	Ddx42	100	76.489	ENSTGUG00000001931	DDX42	100	76.803	Taeniopygia_guttata
ENSDORG00000004199	Ddx42	99	63.996	ENSTRUG00000010711	ddx42	99	67.478	Takifugu_rubripes
ENSDORG00000004199	Ddx42	81	83.093	ENSTBEG00000010159	DDX42	99	84.211	Tupaia_belangeri
ENSDORG00000004199	Ddx42	100	86.915	ENSTTRG00000006962	DDX42	100	87.234	Tursiops_truncatus
ENSDORG00000004199	Ddx42	100	87.633	ENSUAMG00000007321	DDX42	100	87.633	Ursus_americanus
ENSDORG00000004199	Ddx42	100	87.821	ENSUMAG00000017438	DDX42	100	87.821	Ursus_maritimus
ENSDORG00000004199	Ddx42	100	77.849	ENSVPAG00000009633	DDX42	100	78.168	Vicugna_pacos
ENSDORG00000004199	Ddx42	100	87.420	ENSVVUG00000006095	DDX42	100	87.740	Vulpes_vulpes
ENSDORG00000004199	Ddx42	100	69.383	ENSXETG00000003245	ddx42	100	69.383	Xenopus_tropicalis
ENSDORG00000004199	Ddx42	88	66.087	ENSXCOG00000017560	ddx42	97	68.176	Xiphophorus_couchianus
ENSDORG00000004199	Ddx42	100	64.021	ENSXMAG00000008138	ddx42	99	65.778	Xiphophorus_maculatus