EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000004527 (Gene tree)
Gene ID: 105982532
Gene Symbol: Snrpn
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 5082 bases
Position: chrKN672361.1:10591114-10596195
Accession: 105982532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000004237	LSM	PF01423.22	5.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000004527	-	923	XM_013012178	ENSDORP00000004237	240 (aa)	XP_012867632	A0A1S3EW28

Gene Model

Click here to download ENSDORG00000004527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000004527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000004527	Snrpn	90	92.093	ENSDORG00000029558	Snrpb	93	92.093

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000004527	Snrpn	100	99.583	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSDORG00000004527	Snrpn	99	99.163	ENSAMEG00000007034	SNRPN	98	99.163	Ailuropoda_melanoleuca
ENSDORG00000004527	Snrpn	100	99.583	ENSANAG00000034241	SNRPN	100	99.583	Aotus_nancymaae
ENSDORG00000004527	Snrpn	100	99.167	ENSBTAG00000008251	SNRPN	100	99.167	Bos_taurus
ENSDORG00000004527	Snrpn	100	99.583	ENSCJAG00000003759	-	100	99.583	Callithrix_jacchus
ENSDORG00000004527	Snrpn	95	99.123	ENSCJAG00000042622	-	95	99.123	Callithrix_jacchus
ENSDORG00000004527	Snrpn	100	99.167	ENSCAFG00000010127	SNRPN	100	99.167	Canis_familiaris
ENSDORG00000004527	Snrpn	100	99.167	ENSCAFG00020024075	SNRPN	100	99.167	Canis_lupus_dingo
ENSDORG00000004527	Snrpn	100	99.167	ENSCHIG00000017477	SNRPN	100	99.167	Capra_hircus
ENSDORG00000004527	Snrpn	100	99.583	ENSTSYG00000005248	SNRPN	100	99.583	Carlito_syrichta
ENSDORG00000004527	Snrpn	100	99.583	ENSCAPG00000003047	SNRPN	100	99.583	Cavia_aperea
ENSDORG00000004527	Snrpn	100	99.583	ENSCPOG00000020270	SNRPN	100	99.583	Cavia_porcellus
ENSDORG00000004527	Snrpn	100	99.583	ENSCCAG00000024231	SNRPN	100	99.583	Cebus_capucinus
ENSDORG00000004527	Snrpn	100	99.583	ENSCATG00000032518	SNRPN	100	99.583	Cercocebus_atys
ENSDORG00000004527	Snrpn	100	99.583	ENSCLAG00000011376	SNRPN	100	99.583	Chinchilla_lanigera
ENSDORG00000004527	Snrpn	100	99.583	ENSCSAG00000006406	SNRPN	100	99.583	Chlorocebus_sabaeus
ENSDORG00000004527	Snrpn	98	99.145	ENSCHOG00000001846	SNRPN	88	99.145	Choloepus_hoffmanni
ENSDORG00000004527	Snrpn	100	99.583	ENSCANG00000041156	SNRPN	100	99.583	Colobus_angolensis_palliatus
ENSDORG00000004527	Snrpn	100	99.167	ENSCGRG00001004136	Snrpn	100	99.167	Cricetulus_griseus_chok1gshd
ENSDORG00000004527	Snrpn	100	99.167	ENSCGRG00000001621	Snrpn	100	99.167	Cricetulus_griseus_crigri
ENSDORG00000004527	Snrpn	72	92.486	ENSCVAG00000014193	SNRPN	69	92.857	Cyprinodon_variegatus
ENSDORG00000004527	Snrpn	99	98.745	ENSDNOG00000037060	SNRPN	98	98.745	Dasypus_novemcinctus
ENSDORG00000004527	Snrpn	100	99.167	ENSEASG00005017871	SNRPN	100	99.167	Equus_asinus_asinus
ENSDORG00000004527	Snrpn	100	99.167	ENSECAG00000018148	SNRPN	100	99.167	Equus_caballus
ENSDORG00000004527	Snrpn	99	98.745	ENSEEUG00000007440	-	100	98.745	Erinaceus_europaeus
ENSDORG00000004527	Snrpn	100	99.167	ENSFCAG00000022298	-	100	99.167	Felis_catus
ENSDORG00000004527	Snrpn	100	100.000	ENSFDAG00000016578	-	100	100.000	Fukomys_damarensis
ENSDORG00000004527	Snrpn	76	86.339	ENSFDAG00000010528	-	86	86.339	Fukomys_damarensis
ENSDORG00000004527	Snrpn	74	76.836	ENSGMOG00000018161	SNRPN	74	76.190	Gadus_morhua
ENSDORG00000004527	Snrpn	100	99.583	ENSGGOG00000003988	SNRPN	100	99.583	Gorilla_gorilla
ENSDORG00000004527	Snrpn	90	73.023	ENSGGOG00000024469	-	69	83.942	Gorilla_gorilla
ENSDORG00000004527	Snrpn	90	80.465	ENSHGLG00000020936	-	88	79.343	Heterocephalus_glaber_female
ENSDORG00000004527	Snrpn	100	85.000	ENSHGLG00000002327	-	88	84.507	Heterocephalus_glaber_female
ENSDORG00000004527	Snrpn	89	91.080	ENSHGLG00000019812	-	89	90.610	Heterocephalus_glaber_female
ENSDORG00000004527	Snrpn	100	99.583	ENSHGLG00000011924	SNRPN	100	99.583	Heterocephalus_glaber_female
ENSDORG00000004527	Snrpn	89	91.080	ENSHGLG00100021056	-	89	90.610	Heterocephalus_glaber_male
ENSDORG00000004527	Snrpn	100	82.500	ENSHGLG00100004881	-	88	82.629	Heterocephalus_glaber_male
ENSDORG00000004527	Snrpn	100	99.583	ENSHGLG00100016559	SNRPN	100	99.583	Heterocephalus_glaber_male
ENSDORG00000004527	Snrpn	100	99.583	ENSSTOG00000001339	SNRPN	100	99.583	Ictidomys_tridecemlineatus
ENSDORG00000004527	Snrpn	99	100.000	ENSLAFG00000009458	SNRPN	99	100.000	Loxodonta_africana
ENSDORG00000004527	Snrpn	100	99.583	ENSMFAG00000042235	SNRPN	100	99.583	Macaca_fascicularis
ENSDORG00000004527	Snrpn	100	99.583	ENSMMUG00000023139	SNURF	100	99.583	Macaca_mulatta
ENSDORG00000004527	Snrpn	100	99.583	ENSMNEG00000031291	SNRPN	100	99.583	Macaca_nemestrina
ENSDORG00000004527	Snrpn	100	99.583	ENSMLEG00000038837	SNRPN	100	99.583	Mandrillus_leucophaeus
ENSDORG00000004527	Snrpn	92	85.909	ENSMGAG00000008696	SNRPN	92	85.909	Meleagris_gallopavo
ENSDORG00000004527	Snrpn	100	99.583	ENSMAUG00000000051	Snrpn	100	99.583	Mesocricetus_auratus
ENSDORG00000004527	Snrpn	100	99.583	ENSMICG00000042356	SNRPN	100	99.583	Microcebus_murinus
ENSDORG00000004527	Snrpn	100	99.583	ENSMOCG00000015350	Snrpn	100	99.583	Microtus_ochrogaster
ENSDORG00000004527	Snrpn	92	94.118	ENSMODG00000013926	-	92	94.118	Monodelphis_domestica
ENSDORG00000004527	Snrpn	100	99.583	MGP_CAROLIEiJ_G0029815	Snrpn	100	99.583	Mus_caroli
ENSDORG00000004527	Snrpn	100	99.583	ENSMUSG00000102252	Snrpn	100	99.583	Mus_musculus
ENSDORG00000004527	Snrpn	100	99.583	MGP_PahariEiJ_G0013040	Snrpn	100	99.583	Mus_pahari
ENSDORG00000004527	Snrpn	100	99.583	MGP_SPRETEiJ_G0030918	Snrpn	100	99.583	Mus_spretus
ENSDORG00000004527	Snrpn	100	99.167	ENSMPUG00000014638	-	100	99.167	Mustela_putorius_furo
ENSDORG00000004527	Snrpn	88	51.659	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSDORG00000004527	Snrpn	99	99.582	ENSMLUG00000023361	-	98	99.582	Myotis_lucifugus
ENSDORG00000004527	Snrpn	85	61.275	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSDORG00000004527	Snrpn	95	62.719	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSDORG00000004527	Snrpn	100	99.583	ENSNGAG00000000181	Snrpn	100	99.583	Nannospalax_galili
ENSDORG00000004527	Snrpn	100	83.333	ENSNLEG00000001376	SNRPN	99	83.333	Nomascus_leucogenys
ENSDORG00000004527	Snrpn	98	81.624	ENSODEG00000016065	-	87	86.957	Octodon_degus
ENSDORG00000004527	Snrpn	95	99.563	ENSODEG00000019708	-	96	99.563	Octodon_degus
ENSDORG00000004527	Snrpn	100	100.000	ENSODEG00000013478	-	100	100.000	Octodon_degus
ENSDORG00000004527	Snrpn	100	99.583	ENSODEG00000020110	-	100	99.583	Octodon_degus
ENSDORG00000004527	Snrpn	100	99.170	ENSOCUG00000003532	-	100	99.170	Oryctolagus_cuniculus
ENSDORG00000004527	Snrpn	74	92.090	ENSORLG00020007490	SNRPN	69	93.452	Oryzias_latipes_hni
ENSDORG00000004527	Snrpn	74	92.090	ENSORLG00015003332	SNRPN	69	93.452	Oryzias_latipes_hsok
ENSDORG00000004527	Snrpn	74	92.655	ENSOMEG00000002066	SNRPN	69	94.048	Oryzias_melastigma
ENSDORG00000004527	Snrpn	100	99.583	ENSOGAG00000007392	SNRPN	100	99.583	Otolemur_garnettii
ENSDORG00000004527	Snrpn	100	99.167	ENSOARG00000009080	SNRPN	100	99.167	Ovis_aries
ENSDORG00000004527	Snrpn	97	68.803	ENSPPAG00000034049	-	65	79.720	Pan_paniscus
ENSDORG00000004527	Snrpn	100	99.583	ENSPPAG00000027650	SNRPN	100	99.583	Pan_paniscus
ENSDORG00000004527	Snrpn	100	99.167	ENSPPRG00000019878	-	100	99.167	Panthera_pardus
ENSDORG00000004527	Snrpn	85	63.902	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSDORG00000004527	Snrpn	100	98.750	ENSPTIG00000004537	SNRPN	100	98.750	Panthera_tigris_altaica
ENSDORG00000004527	Snrpn	97	69.231	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSDORG00000004527	Snrpn	100	99.583	ENSPTRG00000006826	SNRPN	100	99.583	Pan_troglodytes
ENSDORG00000004527	Snrpn	100	99.583	ENSPANG00000020142	SNRPN	100	99.583	Papio_anubis
ENSDORG00000004527	Snrpn	89	95.327	ENSPEMG00000020979	-	89	95.305	Peromyscus_maniculatus_bairdii
ENSDORG00000004527	Snrpn	89	85.915	ENSPEMG00000013920	-	88	86.385	Peromyscus_maniculatus_bairdii
ENSDORG00000004527	Snrpn	100	99.583	ENSPEMG00000012911	-	100	99.583	Peromyscus_maniculatus_bairdii
ENSDORG00000004527	Snrpn	76	97.253	ENSPCIG00000004699	-	68	94.811	Phascolarctos_cinereus
ENSDORG00000004527	Snrpn	72	93.642	ENSPMEG00000020674	SNRPN	69	93.452	Poecilia_mexicana
ENSDORG00000004527	Snrpn	100	99.583	ENSPPYG00000006269	SNURF	100	99.583	Pongo_abelii
ENSDORG00000004527	Snrpn	100	99.583	ENSPCOG00000014231	SNRPN	100	99.583	Propithecus_coquereli
ENSDORG00000004527	Snrpn	100	99.583	ENSRNOG00000059764	Snrpn	100	99.583	Rattus_norvegicus
ENSDORG00000004527	Snrpn	100	99.583	ENSRBIG00000041765	SNRPN	100	99.583	Rhinopithecus_bieti
ENSDORG00000004527	Snrpn	100	99.583	ENSRROG00000035157	SNRPN	100	99.583	Rhinopithecus_roxellana
ENSDORG00000004527	Snrpn	100	98.333	ENSSBOG00000024929	-	100	98.333	Saimiri_boliviensis_boliviensis
ENSDORG00000004527	Snrpn	100	99.583	ENSSBOG00000000110	-	100	99.583	Saimiri_boliviensis_boliviensis
ENSDORG00000004527	Snrpn	76	96.721	ENSSHAG00000010257	-	87	94.366	Sarcophilus_harrisii
ENSDORG00000004527	Snrpn	99	78.243	ENSSARG00000000072	SNRPN	100	78.243	Sorex_araneus
ENSDORG00000004527	Snrpn	100	99.583	ENSSSCG00000028124	SNRPN	100	99.583	Sus_scrofa
ENSDORG00000004527	Snrpn	100	99.167	ENSTTRG00000010966	SNRPN	89	99.167	Tursiops_truncatus
ENSDORG00000004527	Snrpn	93	99.103	ENSUAMG00000016284	SNRPN	78	99.103	Ursus_americanus
ENSDORG00000004527	Snrpn	100	99.167	ENSUMAG00000025589	SNRPN	100	99.167	Ursus_maritimus
ENSDORG00000004527	Snrpn	95	99.127	ENSVVUG00000017971	SNRPN	94	99.127	Vulpes_vulpes